Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-160
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-183
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 114

Conread position: 1-191
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 163

Conread position: 1-194
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 124

Conread position: 1-194
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 31

Conread position: 1-194
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 114

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 105

Conread position: 1-197
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 114

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 160

Conread position: 1-198
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 98

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 78

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-203
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 1-204
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 104

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 125

Conread position: 1-206
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 39

Conread position: 1-209
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 197

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 29

Conread position: 1-211
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 38

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 35

Conread position: 1-214
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 32

Conread position: 1-214
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 88, 169

Conread position: 1-215
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 117

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 105

Conread position: 2-206
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 161

Conread position: 2-213
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 84

Conread position: 7-199
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 31

Conread position: 7-201
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 100, 189

Conread position: 7-206
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 138

Conread position: 9-189
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 15

Conread position: 9-200
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 29

Conread position: 9-200
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 188

Conread position: 10-195
Cow position:
Alignm length: 187
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 149

Conread position: 10-203
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 149

Conread position: 11-196
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 12-189
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 20

Conread position: 12-193
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 143, 0

Conread position: 12-197
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 100, 20

Conread position: 12-203
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 12-206
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 113, 147

Conread position: 12-211
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 12-212
Cow position:
Alignm length: 202
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 102

Conread position: 12-214
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 100, 182

Conread position: 12-214
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 12-215
Cow position:
Alignm length: 204
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 13-182
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 13-195
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 78

Conread position: 13-198
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 13-199
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 154, 93

Conread position: 13-206
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 180, 0

Conread position: 13-211
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 129

Conread position: 13-214
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 13-214
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 65

Conread position: 13-215
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 178, 101

Conread position: 14-213
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 14-228
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 68

Conread position: 14-243
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 229

Conread position: 16-200
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 17-205
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 183

Conread position: 21-204
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 22-199
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 140

Conread position: 22-212
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 62

Conread position: 22-215
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 57

Conread position: 23-199
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 96

Conread position: 23-200
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 27-206
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 91

Conread position: 28-189
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 12

Conread position: 29-210
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 85

Conread position: 29-214
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 38-199
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 124

Conread position: 38-200
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 0

Conread position: 38-210
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 111

Conread position: 38-212
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 160

Conread position: 38-214
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 74, 126

Conread position: 38-224
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 80

Conread position: 38-231
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 75, 158

Conread position: 39-211
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 45-203
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 150

Conread position: 88-215
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 148-472
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 94, 53

Conread position: 149-387
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 91, 52

Conread position: 149-473
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 95, 27

Conread position: 149-473
Cow position:
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 52

Conread position: 187-457
Cow position:
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 187-473
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 90

Conread position: 192-442
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 138

Conread position: 195-473
Cow position:
Alignm length: 294
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 131

Conread position: 196-473
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 85

Conread position: 197-473
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 134

Conread position: 197-473
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 127

Conread position: 197-473
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 138

Conread position: 201-382
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 128

Conread position: 201-473
Cow position:
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 129

Conread position: 207-471
Cow position:
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 123

Conread position: 207-473
Cow position:
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 127

Conread position: 208-455
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 36, 74

Conread position: 208-459
Cow position:
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 122

Conread position: 208-467
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 102

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 116

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 57

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 36, 106

Conread position: 208-473
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position:
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 36, 116

Conread position: 239-473
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 76

Conread position: 240-473
Cow position:
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 86

Conread position: 240-473
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 185, 80

Conread position: 242-473
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 178, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 164, 78

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 252-473
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 146, 70

Conread position: 287-473
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 134, 35

Show alignments to all cow chromosomes.