Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-160
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 39

Conread position: 1-189
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 1-190
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-191
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 112

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 106

Conread position: 1-195
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 162

Conread position: 1-195
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 123

Conread position: 1-198
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 99

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 149

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 99

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 155

Conread position: 1-202
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 64

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 43

Conread position: 1-204
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 105

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 105

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 1-209
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 38

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 22

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 159

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 38

Conread position: 1-214
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 38

Conread position: 1-214
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 10, 162

Conread position: 1-214
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 17

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 8, 140

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 51

Conread position: 1-222
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 44

Conread position: 1-225
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 8, 124

Conread position: 1-225
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 198

Conread position: 1-228
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 5-216
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 135

Conread position: 7-195
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 7-206
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 7-210
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 105, 51

Conread position: 7-214
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 7-217
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 9-214
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 102, 23

Conread position: 10-202
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 181, 101

Conread position: 10-220
Cow position:
Alignm length: 217
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 91, 77

Conread position: 11-191
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 12-160
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 12-194
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 12-195
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 26

Conread position: 12-196
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 12-200
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 190

Conread position: 12-203
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 148

Conread position: 12-206
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 173, 0

Conread position: 12-206
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 175

Conread position: 12-208
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 170, 20

Conread position: 12-214
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 129

Conread position: 12-215
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 189, 103

Conread position: 12-218
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 31

Conread position: 12-219
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 71

Conread position: 12-221
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 153, 86

Conread position: 12-225
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 197

Conread position: 13-199
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 99, 30

Conread position: 13-203
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 13-203
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 133

Conread position: 13-206
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 152, 57

Conread position: 13-207
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 181

Conread position: 13-213
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 70

Conread position: 13-216
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 89

Conread position: 14-190
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 14-196
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 14-200
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 182

Conread position: 14-203
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 15-199
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 70

Conread position: 15-200
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 179

Conread position: 20-200
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 92, 20

Conread position: 21-210
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 17

Conread position: 22-215
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 23-199
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 24-199
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 176

Conread position: 24-215
Cow position:
Alignm length: 193
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 89, 101

Conread position: 28-194
Cow position:
Alignm length: 168
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 31-206
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 60

Conread position: 38-198
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 160

Conread position: 38-206
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 158

Conread position: 38-211
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 155, 0

Conread position: 38-220
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 39-214
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 40-206
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 120

Conread position: 51-214
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 164

Conread position: 58-206
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 148-470
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 89, 127

Conread position: 149-473
Cow position:
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 183-473
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 18

Conread position: 186-468
Cow position:
Alignm length: 299
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 146

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 14

Conread position: 187-473
Cow position:
Alignm length: 308
Alignm identity: 224
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 305
Alignm identity: 216
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 12, 112

Conread position: 190-473
Cow position:
Alignm length: 299
Alignm identity: 227
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 54, 11

Conread position: 195-467
Cow position:
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 136

Conread position: 195-473
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 137

Conread position: 195-473
Cow position:
Alignm length: 297
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 137

Conread position: 197-471
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 127

Conread position: 201-473
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 130

Conread position: 206-473
Cow position:
Alignm length: 279
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 121

Conread position: 208-394
Cow position:
Alignm length: 196
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 122

Conread position: 208-418
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 122

Conread position: 208-454
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 71

Conread position: 208-471
Cow position:
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 105

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 114

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 91

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 208-473
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 122

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 70

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 36, 123

Conread position: 209-472
Cow position:
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 121

Conread position: 209-473
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 30, 122

Conread position: 209-473
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 122

Conread position: 209-473
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 122

Conread position: 209-473
Cow position:
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 7

Conread position: 215-403
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 113

Conread position: 218-473
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 26, 113

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 179, 73

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 179, 28

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 164, 80

Conread position: 242-473
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 64, 72

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 249-473
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 172, 73

Conread position: 275-471
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 145, 47

Conread position: 277-473
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 140, 38

Conread position: 282-473
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 57

Conread position: 295-473
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 27

Conread position: 299-473
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 121, 26

Conread position: 299-473
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 122, 23

Conread position: 341-473
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 62

Show alignments to all cow chromosomes.