Cow genome map


           Conread name:
           rret01_b8.y1
        

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 116
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 67
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               10, 113
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               10, 77
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               111, 193
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               101, 134
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               10-215
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               10-218
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               12-199
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               54, 106
               

               Conread position:
               12-214
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               101, 12
               

               Conread position:
               12-226
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 194
               

               Conread position:
               13-200
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 147
               

               Conread position:
               13-214
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               13-225
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 141
               

               Conread position:
               14-196
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               98, 10
               

               Conread position:
               15-206
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               5, 84
               

               Conread position:
               16-215
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               96, 148
               

               Conread position:
               17-211
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               21-182
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               21-210
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               91, 108
               

               Conread position:
               24-203
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               39-206
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               39-210
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               156, 94
               

               Conread position:
               44-195
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               132-469
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               111, 69
               

               Conread position:
               161-473
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               169-471
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               186-357
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 114
               

               Conread position:
               186-473
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               187-391
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               187-464
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               187-473
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               187-473
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               187-473
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               192-473
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               58, 81
               

               Conread position:
               196-473
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               197-473
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               47, 133
               

               Conread position:
               208-395
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               158
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               38, 122
               

               Conread position:
               208-408
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               36, 121
               

               Conread position:
               208-418
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               36, 122
               

               Conread position:
               208-470
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 123
               

               Conread position:
               208-472
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               30, 122
               

               Conread position:
               208-473
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               208-473
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               208-473
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               38, 122
               

               Conread position:
               208-473
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               36, 124
               

               Conread position:
               210-473
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 119
               

               Conread position:
               215-464
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 115
               

               Conread position:
               226-472
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 199
               

               Conread position:
               236-465
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 86
               

               Conread position:
               239-472
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               56, 87
               

               Conread position:
               240-468
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               175, 82
               

               Conread position:
               240-472
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 82
               

               Conread position:
               240-473
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               180, 69
               

               Conread position:
               241-472
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               121, 19
               

               Conread position:
               242-471
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               179, 80
               

               Conread position:
               242-473
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               179, 33
               

               Conread position:
               242-473
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               151, 73
               

               Conread position:
               242-473
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               179, 27
               

               Conread position:
               243-467
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               175, 82
               

               Conread position:
               244-465
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               176, 71
               

               Conread position:
               246-467
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               175, 76
               

               Conread position:
               255-468
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               165, 67
               

               Conread position:
               256-473
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               170, 66
               

               Conread position:
               282-470
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               134, 35
               
Show alignments to all cow chromosomes.