Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-180
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-190
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 121

Conread position: 1-190
Cow position:
Alignm length: 191
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 105

Conread position: 1-194
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 114

Conread position: 1-199
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 165

Conread position: 1-199
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 164

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 67

Conread position: 1-200
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 202

Conread position: 1-202
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 40

Conread position: 1-203
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 40

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 43

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 114

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 99

Conread position: 1-208
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 114

Conread position: 1-211
Cow position:
Alignm length: 211
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-214
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 172

Conread position: 1-222
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 38

Conread position: 1-223
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 152

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 196

Conread position: 1-333
Cow position:
Alignm length: 344
Alignm identity: 219
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 108

Conread position: 2-211
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 2-226
Cow position:
Alignm length: 227
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 120

Conread position: 3-222
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 192

Conread position: 4-214
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 78, 101

Conread position: 7-211
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 153

Conread position: 7-231
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 213, 185

Conread position: 10-211
Cow position:
Alignm length: 203
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 102, 28

Conread position: 12-196
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 152

Conread position: 12-198
Cow position:
Alignm length: 188
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 182

Conread position: 12-199
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 12-199
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 12-199
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 86

Conread position: 12-202
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 150

Conread position: 12-213
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 12-214
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 13-209
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 184, 85

Conread position: 13-216
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 21-214
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 21-224
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 188

Conread position: 22-197
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 118

Conread position: 23-195
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 23-214
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 173

Conread position: 27-201
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 75

Conread position: 38-204
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 124

Conread position: 38-206
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 155

Conread position: 38-214
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 124

Conread position: 38-221
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 39-206
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 78

Conread position: 40-198
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 40

Conread position: 40-214
Cow position:
Alignm length: 175
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 53-200
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 66

Conread position: 87-214
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 108

Conread position: 145-456
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 56

Conread position: 147-470
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 97, 54

Conread position: 147-472
Cow position:
Alignm length: 342
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 99, 29

Conread position: 147-473
Cow position:
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 54

Conread position: 147-473
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 58

Conread position: 149-369
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 52

Conread position: 160-473
Cow position:
Alignm length: 330
Alignm identity: 234
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 17, 24

Conread position: 171-473
Cow position:
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 8

Conread position: 187-445
Cow position:
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 14

Conread position: 187-469
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 303
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 306
Alignm identity: 223
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 191-473
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 24, 28

Conread position: 192-473
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 138

Conread position: 192-473
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 129

Conread position: 192-473
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 138

Conread position: 195-472
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 46, 135

Conread position: 195-473
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 136

Conread position: 208-418
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 115

Conread position: 208-470
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 122

Conread position: 208-472
Cow position:
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 121

Conread position: 208-473
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 38, 101

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 87

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 36, 121

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 110

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 107

Conread position: 209-471
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 35, 122

Conread position: 209-473
Cow position:
Alignm length: 278
Alignm identity: 202
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 45, 123

Conread position: 209-473
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 122

Conread position: 213-473
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 101

Conread position: 215-473
Cow position:
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 100

Conread position: 218-473
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 26, 113

Conread position: 239-473
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 83

Conread position: 242-470
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 151

Conread position: 242-472
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 236
Alignm identity: 183
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 179, 67

Conread position: 242-473
Cow position:
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 80

Conread position: 242-473
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 80

Conread position: 242-473
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 166, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 178, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 243-465
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 69, 21

Conread position: 243-473
Cow position:
Alignm length: 237
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 79

Conread position: 279-473
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 147, 26

Conread position: 290-470
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 116, 22

Conread position: 325-473
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 0

Show alignments to all cow chromosomes.