Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-175
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 79

Conread position: 1-178
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 73

Conread position: 1-182
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-182
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 1-187
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-188
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 1-194
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 22

Conread position: 1-198
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 1-202
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 31

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 139

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 1-206
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 145

Conread position: 1-206
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 100

Conread position: 1-207
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 114

Conread position: 1-207
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 161

Conread position: 1-209
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 10, 105

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 102

Conread position: 1-212
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 93

Conread position: 1-212
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 20

Conread position: 1-213
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 31

Conread position: 1-214
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 189

Conread position: 1-214
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 134

Conread position: 1-214
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 201

Conread position: 1-215
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 1-215
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 40

Conread position: 1-215
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 210

Conread position: 1-219
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 197

Conread position: 1-261
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 114

Conread position: 3-195
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 38

Conread position: 3-206
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 71, 9

Conread position: 7-206
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 105, 31

Conread position: 9-203
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 9-206
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 87, 67

Conread position: 9-206
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 140

Conread position: 10-199
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 153

Conread position: 12-160
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 93, 109

Conread position: 12-190
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 12-198
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 183

Conread position: 12-199
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 12-199
Cow position:
Alignm length: 189
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 101, 119

Conread position: 12-203
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 96, 26

Conread position: 12-206
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 12-213
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 86, 185

Conread position: 12-214
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 12-214
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 136

Conread position: 12-214
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 28

Conread position: 12-215
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 28

Conread position: 13-199
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 99, 44

Conread position: 13-199
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 85

Conread position: 13-202
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 13-206
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 59

Conread position: 13-215
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 70

Conread position: 13-219
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 195

Conread position: 13-227
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 14-206
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 115, 61

Conread position: 15-195
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 36

Conread position: 16-206
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 22

Conread position: 16-211
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 182

Conread position: 21-200
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 58

Conread position: 22-186
Cow position:
Alignm length: 167
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 23-191
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 83, 17

Conread position: 23-191
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 17

Conread position: 23-213
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 61

Conread position: 24-203
Cow position:
Alignm length: 181
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 24-206
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 26-199
Cow position:
Alignm length: 175
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 88, 17

Conread position: 29-209
Cow position:
Alignm length: 183
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 172, 164

Conread position: 33-191
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 38-195
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 38-199
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 156

Conread position: 38-202
Cow position:
Alignm length: 168
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 74, 40

Conread position: 38-218
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 162

Conread position: 38-221
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 40-199
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 147-473
Cow position:
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 54

Conread position: 147-473
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 29

Conread position: 149-473
Cow position:
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 52

Conread position: 153-473
Cow position:
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 48

Conread position: 160-418
Cow position:
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 160-467
Cow position:
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 172

Conread position: 171-473
Cow position:
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 34

Conread position: 177-473
Cow position:
Alignm length: 310
Alignm identity: 224
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 64, 214

Conread position: 181-465
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 21

Conread position: 181-473
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 182-473
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 59, 181

Conread position: 187-470
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 19

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 14

Conread position: 187-473
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 189-473
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 182

Conread position: 192-471
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 138

Conread position: 194-473
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 139

Conread position: 195-473
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 49, 137

Conread position: 196-472
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 144

Conread position: 196-473
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 137

Conread position: 201-473
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 130

Conread position: 208-405
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 127

Conread position: 208-472
Cow position:
Alignm length: 280
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 123

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 95

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 38, 113

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 116

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 116

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 35, 107

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 115

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 36, 76

Conread position: 208-473
Cow position:
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 106

Conread position: 208-473
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 118

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 209-472
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 118

Conread position: 210-404
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 104

Conread position: 210-409
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 65, 39

Conread position: 215-473
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 116

Conread position: 217-473
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 36, 56

Conread position: 224-466
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 91

Conread position: 225-471
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 112

Conread position: 240-472
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 122, 65

Conread position: 240-473
Cow position:
Alignm length: 238
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 82

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 177, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 178, 80

Conread position: 242-473
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 179, 70

Conread position: 245-473
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 69, 78

Conread position: 245-473
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 64

Conread position: 254-473
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 165, 68

Conread position: 257-473
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 159, 23

Conread position: 282-471
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 138, 30

Conread position: 294-473
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 125, 26

Conread position: 298-473
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 128, 24

Conread position: 333-471
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 28

Conread position: 348-473
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 380-472
Cow position:
Alignm length: 93
Alignm identity: 78
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.