Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-175
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 8

Conread position: 1-190
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 1-192
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 1-195
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 100

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 1-199
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 112

Conread position: 1-199
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 165

Conread position: 1-199
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 104, 37

Conread position: 1-200
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 8, 201

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 51

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 116

Conread position: 1-201
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-202
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 11

Conread position: 1-204
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 10, 187

Conread position: 1-204
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 207

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 82

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 1-206
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 194

Conread position: 1-206
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 1-207
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 195

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 10, 167

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 10, 167

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 102

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 91

Conread position: 1-211
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 32

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 138

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 112

Conread position: 1-214
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 73

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 142

Conread position: 1-216
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 75

Conread position: 1-218
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 98

Conread position: 2-216
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 117

Conread position: 9-204
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 43, 15

Conread position: 9-214
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 186

Conread position: 10-197
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 125

Conread position: 10-198
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 50

Conread position: 10-198
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 10-202
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 10-206
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 83, 66

Conread position: 10-207
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 65

Conread position: 11-203
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 101, 27

Conread position: 12-154
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 98, 26

Conread position: 12-161
Cow position:
Alignm length: 151
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 12-181
Cow position:
Alignm length: 171
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 123

Conread position: 12-182
Cow position:
Alignm length: 173
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 12-195
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 107, 182

Conread position: 12-197
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 12-197
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 12-198
Cow position:
Alignm length: 188
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 12-199
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 12-199
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 12-199
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 182

Conread position: 12-199
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 12-203
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 12-206
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 12-207
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 158

Conread position: 12-211
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 60

Conread position: 12-212
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 150

Conread position: 12-212
Cow position:
Alignm length: 201
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 12-215
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 12-229
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 186

Conread position: 12-365
Cow position:
Alignm length: 366
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 226

Conread position: 13-199
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 180

Conread position: 13-202
Cow position:
Alignm length: 193
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 13-205
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 99, 105

Conread position: 13-211
Cow position:
Alignm length: 199
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 13-212
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 61, 66

Conread position: 13-218
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 154

Conread position: 13-222
Cow position:
Alignm length: 214
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 182

Conread position: 14-225
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 110

Conread position: 17-200
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 174, 68

Conread position: 17-206
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 183

Conread position: 20-211
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 174

Conread position: 21-214
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 22-198
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 22-203
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 103

Conread position: 22-217
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 52

Conread position: 23-212
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 103, 18

Conread position: 27-211
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 31

Conread position: 29-215
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 83, 183

Conread position: 38-198
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 156

Conread position: 38-212
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 38-214
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 39-205
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 120

Conread position: 39-215
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 73, 79

Conread position: 40-224
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 44-199
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 51-203
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 57-202
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 144-473
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 57

Conread position: 145-473
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 99, 38

Conread position: 147-471
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 54

Conread position: 149-473
Cow position:
Alignm length: 339
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 27

Conread position: 152-469
Cow position:
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 49

Conread position: 169-473
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 10, 68

Conread position: 185-473
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 8, 16

Conread position: 187-468
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 14

Conread position: 187-473
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 190-418
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 11

Conread position: 194-473
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 36

Conread position: 195-472
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 57, 124

Conread position: 201-473
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 129

Conread position: 208-470
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 116

Conread position: 208-471
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 45, 120

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 205
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 208, 61

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 7, 11

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 61

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 123

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 116

Conread position: 213-391
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 112

Conread position: 220-473
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 26, 111

Conread position: 240-473
Cow position:
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 82

Conread position: 242-473
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 139, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 178, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 179, 73

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 179, 71

Conread position: 243-473
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 177, 79

Conread position: 243-473
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 166, 37

Conread position: 245-473
Cow position:
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 78

Conread position: 260-473
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 161, 62

Show alignments to all cow chromosomes.