Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-191
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 98

Conread position: 1-195
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 38

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 31

Conread position: 1-198
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 49

Conread position: 1-198
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-198
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 159

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 98

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 194

Conread position: 1-200
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 32

Conread position: 1-202
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 115

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 38

Conread position: 1-206
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 170

Conread position: 1-207
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 46

Conread position: 1-207
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 51

Conread position: 1-207
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 104

Conread position: 1-210
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 129

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 116

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 40

Conread position: 1-226
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 154, 14

Conread position: 2-189
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 9, 161

Conread position: 3-190
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 4-206
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 111

Conread position: 5-212
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 155

Conread position: 7-199
Cow position:
Alignm length: 194
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 75

Conread position: 7-204
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 194

Conread position: 9-211
Cow position:
Alignm length: 203
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 10-199
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 182, 95

Conread position: 10-206
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 149, 106

Conread position: 10-206
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 10-208
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 57

Conread position: 12-199
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 192

Conread position: 12-199
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 27

Conread position: 12-200
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 39

Conread position: 12-200
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 122

Conread position: 12-201
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 105

Conread position: 12-203
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 67

Conread position: 12-204
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 123

Conread position: 12-205
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 12-206
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 188

Conread position: 12-206
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 188

Conread position: 12-206
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 12-207
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 107

Conread position: 12-207
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-206
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 13-212
Cow position:
Alignm length: 201
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 101, 193

Conread position: 13-212
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 66

Conread position: 15-213
Cow position:
Alignm length: 202
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 16-211
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 21-200
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 77, 141

Conread position: 21-206
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 171, 91

Conread position: 21-210
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 103, 128

Conread position: 23-181
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 23-248
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 91, 79

Conread position: 24-191
Cow position:
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 90

Conread position: 24-195
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 25-208
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 26-198
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 26-213
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 177

Conread position: 32-206
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 161

Conread position: 38-183
Cow position:
Alignm length: 148
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 38-196
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 38-199
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 77, 44

Conread position: 38-204
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 38-206
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 38-214
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 38-214
Cow position:
Alignm length: 180
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 46-198
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 87-202
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 78

Conread position: 183-473
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 140

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 190-471
Cow position:
Alignm length: 304
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 54, 11

Conread position: 191-473
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 55, 10

Conread position: 192-473
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 57, 139

Conread position: 195-473
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 129

Conread position: 196-473
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 137

Conread position: 208-391
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 97

Conread position: 208-404
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 122

Conread position: 208-418
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 116

Conread position: 208-473
Cow position:
Alignm length: 283
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 164

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 120

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 91

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 209-473
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 122

Conread position: 213-473
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 67

Conread position: 218-473
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 26, 113

Conread position: 218-473
Cow position:
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 110

Conread position: 220-473
Cow position:
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 111

Conread position: 240-472
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 60

Conread position: 241-473
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 180, 70

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 179, 38

Conread position: 281-473
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 140, 41

Conread position: 282-473
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 139, 40

Conread position: 283-472
Cow position:
Alignm length: 196
Alignm identity: 155
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 137, 39

Show alignments to all cow chromosomes.