Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-191
Cow position: chr19:25832207-25832015 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 115

Conread position: 1-195
Cow position: chr19:16096562-16096364 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 85

Conread position: 1-195
Cow position: chr19:25835335-25835148 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 7, 38

Conread position: 1-195
Cow position: chr19:42768106-42767914 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 125

Conread position: 1-196
Cow position: chr19:24693000-24693194 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 165

Conread position: 1-197
Cow position: chr19:11646559-11646754 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 140

Conread position: 1-199
Cow position: chr19:14632047-14631848 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 114

Conread position: 1-199
Cow position: chr19:28810325-28810124 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 195

Conread position: 1-200
Cow position: chr19:25726889-25726692 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 96

Conread position: 1-200
Cow position: chr19:49221629-49221428 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 1-202
Cow position: chr19:37467069-37466866 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 194

Conread position: 1-203
Cow position: chr19:12052854-12052649 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 46

Conread position: 1-203
Cow position: chr19:12067737-12067942 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 46

Conread position: 1-203
Cow position: chr19:23889495-23889290 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 188

Conread position: 1-203
Cow position: chr19:47453424-47453627 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 186

Conread position: 1-206
Cow position: chr19:23756750-23756551 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 112

Conread position: 1-206
Cow position: chr19:52187479-52187685 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 111, 68

Conread position: 1-207
Cow position: chr19:3621422-3621631 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 77

Conread position: 1-207
Cow position: chr19:18054264-18054058 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 114

Conread position: 1-210
Cow position: chr19:11560049-11559831 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 214

Conread position: 1-211
Cow position: chr19:23378668-23378881 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 196

Conread position: 1-218
Cow position: chr19:38732131-38732350 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 1-225
Cow position: chr19:7637243-7637014 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-234
Cow position: chr19:15719626-15719398 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 98

Conread position: 1-234
Cow position: chr19:37502041-37501817 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 85

Conread position: 7-208
Cow position: chr19:47185082-47184878 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 21

Conread position: 7-211
Cow position: chr19:5261332-5261544 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 89, 78

Conread position: 7-211
Cow position: chr19:22871258-22871051 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 7-215
Cow position: chr19:7053342-7053136 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 193, 154

Conread position: 7-219
Cow position: chr19:38500166-38500366 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 158, 31

Conread position: 10-228
Cow position: chr19:34758000-34757765 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 11-196
Cow position: chr19:36978270-36978461 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 73

Conread position: 12-182
Cow position: chr19:19916416-19916247 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 12-195
Cow position: chr19:34654606-34654421 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 28

Conread position: 12-203
Cow position: chr19:22043348-22043160 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 55

Conread position: 12-203
Cow position: chr19:41497642-41497446 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 177

Conread position: 12-204
Cow position: chr19:5522151-5521960 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 104, 72

Conread position: 12-206
Cow position: chr19:12279733-12279925 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 159

Conread position: 12-206
Cow position: chr19:23559386-23559584 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 185

Conread position: 12-211
Cow position: chr19:33903419-33903221 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 26

Conread position: 12-213
Cow position: chr19:10238741-10238942 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 181

Conread position: 12-213
Cow position: chr19:34420413-34420617 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 113, 0

Conread position: 12-214
Cow position: chr19:39576564-39576365 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 179, 93

Conread position: 12-214
Cow position: chr19:43413785-43413985 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 118

Conread position: 12-216
Cow position: chr19:23087988-23088190 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 108

Conread position: 12-274
Cow position: chr19:39981741-39982000 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 53

Conread position: 13-183
Cow position: chr19:23394790-23394962 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 13-189
Cow position: chr19:35762244-35762072 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 13-194
Cow position: chr19:52728617-52728799 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 62

Conread position: 13-203
Cow position: chr19:24145023-24145218 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 114

Conread position: 13-211
Cow position: chr19:2068272-2068469 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 66

Conread position: 13-212
Cow position: chr19:14581368-14581566 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 116, 28

Conread position: 14-218
Cow position: chr19:7864064-7864268 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 182, 10

Conread position: 16-209
Cow position: chr19:33233591-33233783 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 110, 90

Conread position: 16-214
Cow position: chr19:53189847-53189643 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 184

Conread position: 18-200
Cow position: chr19:28137164-28137341 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 18-206
Cow position: chr19:16621347-16621158 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 21-202
Cow position: chr19:40127153-40126970 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 174

Conread position: 21-206
Cow position: chr19:6854934-6855117 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 18

Conread position: 21-211
Cow position: chr19:5185242-5185052 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 186, 92

Conread position: 21-214
Cow position: chr19:33988083-33988280 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 32

Conread position: 21-224
Cow position: chr19:20661402-20661192 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 23-199
Cow position: chr19:15852942-15853118 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 89, 171

Conread position: 24-226
Cow position: chr19:14823272-14823470 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 134

Conread position: 25-207
Cow position: chr19:21790750-21790936 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 126

Conread position: 26-202
Cow position: chr19:33575541-33575715 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 38-192
Cow position: chr19:34608170-34608013 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 38-203
Cow position: chr19:10385536-10385369 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 38-206
Cow position: chr19:17259937-17260108 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 126

Conread position: 38-214
Cow position: chr19:27968666-27968489 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 159

Conread position: 38-277
Cow position: chr19:46822739-46822980 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 44

Conread position: 39-198
Cow position: chr19:12685861-12686020 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 73, 154

Conread position: 40-204
Cow position: chr19:12263995-12264154 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 47-194
Cow position: chr19:41388801-41388948 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 51

Conread position: 48-210
Cow position: chr19:7668734-7668898 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 148

Conread position: 177-473
Cow position: chr19:890703-890398 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 177-473
Cow position: chr19:12553746-12553435 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 155

Conread position: 177-473
Cow position: chr19:28404078-28403770 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 67, 102

Conread position: 187-473
Cow position: chr19:33944071-33944365 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position: chr19:44396112-44395813 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 14

Conread position: 192-473
Cow position: chr19:257818-258110 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 54, 102

Conread position: 197-473
Cow position: chr19:20107251-20107541 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 134

Conread position: 207-473
Cow position: chr19:25378457-25378731 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 208-386
Cow position: chr19:39666030-39665844 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 154
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 37, 122

Conread position: 208-435
Cow position: chr19:38810940-38811164 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 93

Conread position: 208-464
Cow position: chr19:3142153-3142435 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 208-473
Cow position: chr19:40854-41133 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr19:5901092-5901368 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 69

Conread position: 208-473
Cow position: chr19:7344554-7344833 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 110

Conread position: 208-473
Cow position: chr19:7490619-7490898 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position: chr19:12775644-12775923 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position: chr19:15445344-15445065 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr19:30517326-30517601 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 116

Conread position: 208-473
Cow position: chr19:44758271-44757996 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 83

Conread position: 213-471
Cow position: chr19:748739-748471 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 114

Conread position: 213-473
Cow position: chr19:5732031-5732302 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 33, 116

Conread position: 218-472
Cow position: chr19:52149015-52148751 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 106

Conread position: 240-473
Cow position: chr19:20126585-20126814 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 181, 82

Conread position: 261-472
Cow position: chr19:1292931-1293147 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 160, 64

Conread position: 296-473
Cow position: chr19:6439810-6439992 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 110, 26

Conread position: 316-473
Cow position: chr19:39695902-39696062 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 105, 19

Show alignments to all cow chromosomes.