Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-186
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 1-189
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-192
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 1-194
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 64

Conread position: 1-195
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 27

Conread position: 1-198
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 115

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 10, 115

Conread position: 1-203
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 166

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 8, 102

Conread position: 1-204
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 58

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 31

Conread position: 1-212
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 91

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 196

Conread position: 1-216
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 10, 194

Conread position: 1-225
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 117

Conread position: 1-245
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 107

Conread position: 7-204
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 5

Conread position: 7-211
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 9-203
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 103, 185

Conread position: 9-203
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 103, 185

Conread position: 10-197
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 96, 163

Conread position: 10-203
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 103, 186

Conread position: 11-220
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 77, 198

Conread position: 12-196
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 117

Conread position: 12-197
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 183, 12

Conread position: 12-197
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 86

Conread position: 12-206
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 101, 66

Conread position: 12-209
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 129

Conread position: 12-211
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 12-212
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 12-215
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 75

Conread position: 13-200
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 8

Conread position: 13-215
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 27

Conread position: 13-215
Cow position:
Alignm length: 204
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 34

Conread position: 23-192
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 23-203
Cow position:
Alignm length: 181
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 23-213
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 37-201
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 14

Conread position: 38-211
Cow position:
Alignm length: 175
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 38-214
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 38-215
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 40-182
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 119

Conread position: 44-200
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 117

Conread position: 49-214
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 69

Conread position: 54-214
Cow position:
Alignm length: 161
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 147-473
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 54

Conread position: 147-473
Cow position:
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 54

Conread position: 149-473
Cow position:
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 187-472
Cow position:
Alignm length: 301
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 189-471
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 142

Conread position: 190-473
Cow position:
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 23

Conread position: 190-473
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 141

Conread position: 195-473
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 136

Conread position: 199-468
Cow position:
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 131

Conread position: 199-473
Cow position:
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 131

Conread position: 208-372
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 122

Conread position: 208-470
Cow position:
Alignm length: 278
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 105

Conread position: 208-471
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 195, 40

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 36, 126

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 121

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 110

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 120

Conread position: 208-473
Cow position:
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 57

Conread position: 208-473
Cow position:
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 123

Conread position: 216-473
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 115

Conread position: 218-473
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 106

Conread position: 230-472
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 94

Conread position: 240-472
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 180, 90

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 179, 79

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 130, 80

Conread position: 266-473
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 57

Conread position: 286-473
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 135, 36

Conread position: 296-467
Cow position:
Alignm length: 178
Alignm identity: 144
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 123, 26

Conread position: 306-473
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 44

Show alignments to all cow chromosomes.