Cow genome map


           Conread name:
           rret01_b8.y1
        

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               8, 40
               

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1-186
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 181
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 115
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               10, 106
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 103
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 97
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 132
               

               Conread position:
               2-195
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               7-199
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 189
               

               Conread position:
               7-200
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               7-201
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               82, 190
               

               Conread position:
               9-211
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               103, 185
               

               Conread position:
               10-208
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               10-211
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               12-186
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               12-195
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               101, 52
               

               Conread position:
               12-199
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               12-200
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               99, 188
               

               Conread position:
               12-200
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               102, 184
               

               Conread position:
               12-203
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               100, 41
               

               Conread position:
               12-204
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               12-206
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 90
               

               Conread position:
               12-215
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               12-217
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               195, 94
               

               Conread position:
               13-202
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               13-204
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 181
               

               Conread position:
               13-204
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-207
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               13-215
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               102, 150
               

               Conread position:
               13-216
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               14-204
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               15-203
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               97, 168
               

               Conread position:
               16-205
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               17-205
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               21-211
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               170, 93
               

               Conread position:
               22-214
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               23-207
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               27-186
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               131, 140
               

               Conread position:
               32-215
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               40-211
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               45-200
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               46-200
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 149
               

               Conread position:
               54-195
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               139-473
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               40, 94
               

               Conread position:
               147-471
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               187-453
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               187-455
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               57, 248
               

               Conread position:
               187-473
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               57, 29
               

               Conread position:
               192-471
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               54, 137
               

               Conread position:
               195-473
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 135
               

               Conread position:
               196-473
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 136
               

               Conread position:
               208-416
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               208-458
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               208-473
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               208-473
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               38, 113
               

               Conread position:
               208-473
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               208-473
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 122
               

               Conread position:
               209-418
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               218-473
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               220-473
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               242-473
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 80
               

               Conread position:
               242-473
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 80
               

               Conread position:
               242-473
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 80
               

               Conread position:
               242-473
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               178, 80
               

               Conread position:
               274-473
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               24, 6
               

               Conread position:
               307-473
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               351-473
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               65, 0
               
Show alignments to all cow chromosomes.