Cow genome map
| Conread name: | rret01_b8.y1 |
| Conread position: | 1-154 |
| Cow position: | chr26:33241909-33242065 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-186 |
| Cow position: | chr26:32897849-32897672 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 73 |
| Conread position: | 1-195 |
| Cow position: | chr26:15132657-15132857 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-199 |
| Cow position: | chr26:7687225-7687022 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-200 |
| Cow position: | chr26:20291672-20291472 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 10, 192 |
| Conread position: | 1-203 |
| Cow position: | chr26:19591503-19591702 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 118 |
| Conread position: | 1-204 |
| Cow position: | chr26:12145098-12144890 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-204 |
| Cow position: | chr26:28423307-28423513 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 22 |
| Conread position: | 1-206 |
| Cow position: | chr26:9535538-9535740 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 1-206 |
| Cow position: | chr26:18825263-18825055 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-207 |
| Cow position: | chr26:23924870-23925071 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 1-211 |
| Cow position: | chr26:5666068-5666275 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 1-211 |
| Cow position: | chr26:22033504-22033710 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 1-211 |
| Cow position: | chr26:33202050-33201838 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 194 |
| Conread position: | 1-211 |
| Cow position: | chr26:34611161-34610953 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 98 |
| Conread position: | 1-213 |
| Cow position: | chr26:12940420-12940642 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 173 |
| Conread position: | 1-214 |
| Cow position: | chr26:8307508-8307296 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 162 |
| Conread position: | 1-214 |
| Cow position: | chr26:26888113-26887902 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 7-189 |
| Cow position: | chr26:5836793-5836607 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 7-203 |
| Cow position: | chr26:24240707-24240904 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 9-193 |
| Cow position: | chr26:16783856-16784041 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 10-191 |
| Cow position: | chr26:11875191-11875012 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 152 |
| Conread position: | 10-211 |
| Cow position: | chr26:22892415-22892213 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 182, 104 |
| Conread position: | 10-221 |
| Cow position: | chr26:34724841-34724634 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 12-196 |
| Cow position: | chr26:33112354-33112170 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 77, 176 |
| Conread position: | 12-199 |
| Cow position: | chr26:9491957-9492140 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 185, 26 |
| Conread position: | 12-200 |
| Cow position: | chr26:19636324-19636510 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 135 |
| Conread position: | 12-206 |
| Cow position: | chr26:34560139-34559943 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 12-214 |
| Cow position: | chr26:33038191-33037989 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 100, 106 |
| Conread position: | 13-199 |
| Cow position: | chr26:6714269-6714078 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 13-199 |
| Cow position: | chr26:9099499-9099312 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 62, 70 |
| Conread position: | 13-214 |
| Cow position: | chr26:647693-647488 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 91, 185 |
| Conread position: | 13-214 |
| Cow position: | chr26:31137431-31137230 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 14-199 |
| Cow position: | chr26:29901027-29900840 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 15-194 |
| Cow position: | chr26:20769886-20770066 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 15-203 |
| Cow position: | chr26:10700868-10700678 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 127 |
| Conread position: | 16-227 |
| Cow position: | chr26:6487755-6487544 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 96, 204 |
| Conread position: | 21-213 |
| Cow position: | chr26:28251197-28251388 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 22-204 |
| Cow position: | chr26:13022505-13022688 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 22-215 |
| Cow position: | chr26:16585477-16585664 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 24-181 |
| Cow position: | chr26:13802155-13802311 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 27-207 |
| Cow position: | chr26:10502776-10502954 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 123 |
| Conread position: | 38-212 |
| Cow position: | chr26:21320004-21320181 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 45-212 |
| Cow position: | chr26:12891906-12891738 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 87-231 |
| Cow position: | chr26:18651752-18651900 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 147-473 |
| Cow position: | chr26:21824249-21823920 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 150-473 |
| Cow position: | chr26:9114444-9114774 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 13, 174 |
| Conread position: | 180-467 |
| Cow position: | chr26:1884400-1884100 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 187-390 |
| Cow position: | chr26:31792948-31793157 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 170 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 187-400 |
| Cow position: | chr26:32846335-32846115 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 187-471 |
| Cow position: | chr26:8654872-8654590 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 187-473 |
| Cow position: | chr26:12667907-12668189 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 187-473 |
| Cow position: | chr26:19349051-19348757 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 191-395 |
| Cow position: | chr26:13772477-13772275 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 63, 121 |
| Conread position: | 191-470 |
| Cow position: | chr26:14488802-14488519 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 201-473 |
| Cow position: | chr26:2200990-2201271 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 124 |
| Conread position: | 208-374 |
| Cow position: | chr26:6497147-6496979 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 208-395 |
| Cow position: | chr26:27988351-27988157 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 208-470 |
| Cow position: | chr26:9841945-9841671 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 35, 135 |
| Conread position: | 208-473 |
| Cow position: | chr26:367091-367369 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 208-473 |
| Cow position: | chr26:12586072-12585799 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 117 |
| Conread position: | 208-473 |
| Cow position: | chr26:17326624-17326899 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 208-473 |
| Cow position: | chr26:23888871-23889149 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 208-473 |
| Cow position: | chr26:35561666-35561948 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 218-473 |
| Cow position: | chr26:18856590-18856858 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 109 |
| Conread position: | 242-473 |
| Cow position: | chr26:13807517-13807289 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 71, 81 |
Show alignments to all cow chromosomes.