Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-175
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 1-182
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 90

Conread position: 1-189
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 31

Conread position: 1-196
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 94

Conread position: 1-196
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 114

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 69

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 193

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 96

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 114

Conread position: 1-200
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 10, 195

Conread position: 1-201
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 17

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 104

Conread position: 1-204
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 92

Conread position: 1-205
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 91

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 85

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 91

Conread position: 1-207
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 111

Conread position: 1-208
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 1-210
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 85

Conread position: 1-212
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 22

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 135

Conread position: 1-225
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 38

Conread position: 1-230
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 10, 60

Conread position: 2-200
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 162

Conread position: 7-198
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 155, 25

Conread position: 7-203
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 7-212
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 201

Conread position: 9-206
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 29

Conread position: 9-223
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 201, 58

Conread position: 10-214
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 75

Conread position: 11-201
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 102, 155

Conread position: 12-182
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 12-191
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 12-195
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 97

Conread position: 12-198
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 134, 0

Conread position: 12-198
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 128

Conread position: 12-198
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 12-199
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 128

Conread position: 12-199
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 175

Conread position: 12-200
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 26

Conread position: 12-202
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 25

Conread position: 12-203
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 12-203
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 12-206
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 108

Conread position: 12-207
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 12-210
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 94, 106

Conread position: 12-212
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 12-219
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 33

Conread position: 13-195
Cow position:
Alignm length: 183
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 13-204
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 183

Conread position: 13-204
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 13-207
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 13-211
Cow position:
Alignm length: 201
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 72

Conread position: 13-219
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 66

Conread position: 14-191
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 14-216
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 176, 100

Conread position: 14-225
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 198, 101

Conread position: 16-199
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 59

Conread position: 17-199
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 73

Conread position: 20-199
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 92, 5

Conread position: 21-200
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 41

Conread position: 21-206
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 21-216
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 183

Conread position: 21-317
Cow position:
Alignm length: 302
Alignm identity: 195
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 97

Conread position: 23-239
Cow position:
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 25-218
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 178, 16

Conread position: 27-211
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 92

Conread position: 34-204
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 61

Conread position: 38-199
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 38-210
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 157

Conread position: 38-311
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 60

Conread position: 42-198
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 43-180
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 44-195
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 48-213
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 144-419
Cow position:
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 8

Conread position: 145-375
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 56

Conread position: 145-404
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 98, 31

Conread position: 147-473
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 60

Conread position: 149-473
Cow position:
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 187-466
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 84

Conread position: 192-470
Cow position:
Alignm length: 296
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 138

Conread position: 195-473
Cow position:
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 135

Conread position: 199-473
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 125

Conread position: 201-473
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 130

Conread position: 208-382
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 38, 98

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 117

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 116

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 120

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 36, 123

Conread position: 209-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 122

Conread position: 210-370
Cow position:
Alignm length: 170
Alignm identity: 138
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 31, 120

Conread position: 213-472
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 13

Conread position: 217-471
Cow position:
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 114

Conread position: 217-473
Cow position:
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 114

Conread position: 240-470
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 186, 82

Conread position: 240-473
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 86, 69

Conread position: 242-473
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 139, 79

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 188, 80

Conread position: 243-473
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 161, 59

Conread position: 254-473
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 164, 68

Conread position: 270-473
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 151, 50

Conread position: 283-472
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 137, 0

Conread position: 285-470
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 37

Conread position: 292-473
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 129, 30

Conread position: 299-473
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 55, 23

Show alignments to all cow chromosomes.