Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-173
Cow position: chr3:52608161-52608335 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 1-186
Cow position: chr3:38864104-38864285 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 107

Conread position: 1-191
Cow position: chr3:10958261-10958072 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 162

Conread position: 1-194
Cow position: chr3:44932495-44932687 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 59

Conread position: 1-196
Cow position: chr3:19585843-19586041 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 43

Conread position: 1-198
Cow position: chr3:70762141-70761945 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 29

Conread position: 1-199
Cow position: chr3:64196805-64197006 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-199
Cow position: chr3:71474425-71474227 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 123

Conread position: 1-200
Cow position: chr3:54506686-54506887 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 1-200
Cow position: chr3:60264737-60264542 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 112

Conread position: 1-202
Cow position: chr3:3883836-3883638 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 73

Conread position: 1-203
Cow position: chr3:68004723-68004524 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 31

Conread position: 1-206
Cow position: chr3:48459350-48459143 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 195

Conread position: 1-206
Cow position: chr3:59299553-59299763 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 100

Conread position: 1-207
Cow position: chr3:23105383-23105177 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 115

Conread position: 1-210
Cow position: chr3:31350125-31349917 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 98

Conread position: 1-212
Cow position: chr3:69785646-69785427 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 1-214
Cow position: chr3:22165436-22165222 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 10, 32

Conread position: 1-214
Cow position: chr3:22924396-22924186 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 112

Conread position: 1-214
Cow position: chr3:49363088-49363300 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 191

Conread position: 1-214
Cow position: chr3:55189775-55189554 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 1-214
Cow position: chr3:59604825-59605036 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 38

Conread position: 1-214
Cow position: chr3:74754304-74754512 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 117

Conread position: 1-214
Cow position: chr3:76922684-76922480 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 6, 110

Conread position: 1-215
Cow position: chr3:47753205-47753435 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 1-217
Cow position: chr3:48072903-48072686 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 11, 161

Conread position: 1-232
Cow position: chr3:19788851-19788627 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 162

Conread position: 2-196
Cow position: chr3:78092531-78092334 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 78

Conread position: 2-207
Cow position: chr3:75107754-75107960 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 123

Conread position: 7-196
Cow position: chr3:23132183-23131991 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 7-212
Cow position: chr3:49344679-49344885 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 156

Conread position: 7-215
Cow position: chr3:76155973-76156182 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 186

Conread position: 10-183
Cow position: chr3:79196748-79196927 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 10-194
Cow position: chr3:53222001-53222187 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 10-211
Cow position: chr3:45211290-45211495 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 74

Conread position: 10-214
Cow position: chr3:30940796-30940997 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 113, 38

Conread position: 10-215
Cow position: chr3:17058557-17058352 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 192

Conread position: 10-230
Cow position: chr3:48468162-48468386 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 84

Conread position: 11-204
Cow position: chr3:19709100-19709290 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 12-180
Cow position: chr3:18607661-18607824 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 12-182
Cow position: chr3:74079645-74079475 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 98, 33

Conread position: 12-191
Cow position: chr3:68616336-68616163 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 12-198
Cow position: chr3:41510567-41510756 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 185

Conread position: 12-200
Cow position: chr3:74234177-74234361 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 100, 150

Conread position: 12-203
Cow position: chr3:15950922-15950733 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 153, 82

Conread position: 12-203
Cow position: chr3:78077176-78077373 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 187

Conread position: 12-206
Cow position: chr3:75479994-75480184 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 26

Conread position: 12-208
Cow position: chr3:59474113-59474309 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 12-210
Cow position: chr3:59610727-59610528 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 118, 84

Conread position: 12-213
Cow position: chr3:7331132-7330943 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 186, 26

Conread position: 12-213
Cow position: chr3:55177755-55177558 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 12-214
Cow position: chr3:12705552-12705355 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 12-214
Cow position: chr3:17331716-17331914 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 12-226
Cow position: chr3:50768670-50768885 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 101, 192

Conread position: 12-229
Cow position: chr3:33002378-33002593 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 20

Conread position: 13-185
Cow position: chr3:26603560-26603380 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 13-190
Cow position: chr3:53150323-53150504 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 149

Conread position: 13-199
Cow position: chr3:18686898-18687080 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 13-200
Cow position: chr3:75966789-75966600 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 26

Conread position: 14-199
Cow position: chr3:31361418-31361603 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 116

Conread position: 14-225
Cow position: chr3:31115277-31115077 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 15-200
Cow position: chr3:8523161-8522974 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 68

Conread position: 16-215
Cow position: chr3:53428922-53428719 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 21-195
Cow position: chr3:52845556-52845730 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 172

Conread position: 23-202
Cow position: chr3:45881900-45882082 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 23-206
Cow position: chr3:68708011-68707836 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 62

Conread position: 23-214
Cow position: chr3:22232652-22232472 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 180, 79

Conread position: 24-195
Cow position: chr3:43896057-43895887 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 24-202
Cow position: chr3:76269895-76270070 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 24-210
Cow position: chr3:83455148-83454965 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 46

Conread position: 24-214
Cow position: chr3:26977537-26977729 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 145

Conread position: 25-200
Cow position: chr3:74050698-74050526 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 27-203
Cow position: chr3:7661858-7662041 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 27-206
Cow position: chr3:44782345-44782524 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 75

Conread position: 27-221
Cow position: chr3:19611346-19611148 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 32-195
Cow position: chr3:8061137-8061296 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 38-197
Cow position: chr3:23408341-23408186 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 38-199
Cow position: chr3:57274076-57274238 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 107

Conread position: 38-226
Cow position: chr3:15160537-15160727 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 169, 77

Conread position: 39-203
Cow position: chr3:77098805-77098640 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 40-197
Cow position: chr3:2636968-2637122 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 78

Conread position: 40-198
Cow position: chr3:48363091-48363247 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 40-212
Cow position: chr3:15051932-15051761 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 158

Conread position: 40-213
Cow position: chr3:26681795-26681626 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 72, 121

Conread position: 41-210
Cow position: chr3:58527402-58527568 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 51-211
Cow position: chr3:27274558-27274718 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 143

Conread position: 71-206
Cow position: chr3:77650633-77650768 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 114

Conread position: 147-391
Cow position: chr3:84112714-84112963 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 97, 54

Conread position: 147-473
Cow position: chr3:6688097-6688437 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 137, 28

Conread position: 147-473
Cow position: chr3:14862491-14862828 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 99, 54

Conread position: 147-473
Cow position: chr3:18461832-18461500 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 43, 29

Conread position: 181-471
Cow position: chr3:74850808-74850513 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 143

Conread position: 181-473
Cow position: chr3:35886018-35885721 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 28

Conread position: 181-473
Cow position: chr3:66622540-66622838 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 182-473
Cow position: chr3:25688970-25689276 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 20

Conread position: 183-401
Cow position: chr3:76004475-76004249 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 147

Conread position: 187-467
Cow position: chr3:77580944-77581232 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position: chr3:23288010-23287712 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position: chr3:50124671-50124373 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 57, 14

Conread position: 189-473
Cow position: chr3:21004141-21004437 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 142

Conread position: 192-389
Cow position: chr3:46504896-46505099 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 136

Conread position: 192-418
Cow position: chr3:63278289-63278071 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 0

Conread position: 195-473
Cow position: chr3:45976832-45977126 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 137

Conread position: 195-473
Cow position: chr3:48525076-48525365 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 141

Conread position: 196-473
Cow position: chr3:7477590-7477299 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 124

Conread position: 196-473
Cow position: chr3:59863889-59864178 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 140

Conread position: 199-473
Cow position: chr3:3982971-3983263 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 131

Conread position: 201-473
Cow position: chr3:66969542-66969257 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 129

Conread position: 208-473
Cow position: chr3:3525390-3525651 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 41

Conread position: 208-473
Cow position: chr3:6382581-6382861 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr3:18113342-18113064 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 124

Conread position: 208-473
Cow position: chr3:18861787-18862066 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position: chr3:19754617-19754337 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position: chr3:19798808-19798529 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr3:19882820-19883099 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr3:20380365-20380094 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 44, 118

Conread position: 208-473
Cow position: chr3:24264545-24264825 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 124

Conread position: 208-473
Cow position: chr3:29328938-29328659 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr3:29581009-29581285 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 205

Conread position: 208-473
Cow position: chr3:30616592-30616314 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 113

Conread position: 208-473
Cow position: chr3:32620697-32620418 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 123

Conread position: 208-473
Cow position: chr3:37971396-37971667 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr3:41208251-41207973 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr3:42151440-42151164 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 113

Conread position: 208-473
Cow position: chr3:43190926-43190647 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 208-473
Cow position: chr3:48239603-48239880 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 122

Conread position: 208-473
Cow position: chr3:53048435-53048156 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 122

Conread position: 208-473
Cow position: chr3:54655115-54655393 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 91

Conread position: 208-473
Cow position: chr3:57741871-57742150 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 75

Conread position: 208-473
Cow position: chr3:58035878-58036151 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 208-473
Cow position: chr3:68697623-68697344 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr3:69931489-69931210 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position: chr3:79592484-79592765 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 38, 132

Conread position: 210-472
Cow position: chr3:39556227-39555962 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 114

Conread position: 210-473
Cow position: chr3:27865522-27865793 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 54

Conread position: 218-473
Cow position: chr3:40337785-40337520 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 106

Conread position: 220-473
Cow position: chr3:22338277-22338531 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 186, 32

Conread position: 223-463
Cow position: chr3:49335578-49335814 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 194, 90

Conread position: 240-470
Cow position: chr3:40343435-40343665 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 26

Conread position: 241-473
Cow position: chr3:50203933-50204168 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 180, 81

Conread position: 242-473
Cow position: chr3:2708483-2708247 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position: chr3:7156323-7156092 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 179, 63

Conread position: 242-473
Cow position: chr3:14452046-14452282 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 178, 80

Conread position: 242-473
Cow position: chr3:34014729-34014965 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position: chr3:44926213-44926445 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 170, 73

Conread position: 243-473
Cow position: chr3:82706910-82706679 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 62

Conread position: 247-473
Cow position: chr3:63000962-63000738 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 179, 22

Conread position: 277-473
Cow position: chr3:49453423-49453622 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 141, 45

Conread position: 333-473
Cow position: chr3:53389172-53389026 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.