Cow genome map
| Conread name: | rret01_b8.y1 |
| Conread position: | 1-173 |
| Cow position: | chr3:52608161-52608335 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-186 |
| Cow position: | chr3:38864104-38864285 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 1-191 |
| Cow position: | chr3:10958261-10958072 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 162 |
| Conread position: | 1-194 |
| Cow position: | chr3:44932495-44932687 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 1-196 |
| Cow position: | chr3:19585843-19586041 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 1-198 |
| Cow position: | chr3:70762141-70761945 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 1-199 |
| Cow position: | chr3:64196805-64197006 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-199 |
| Cow position: | chr3:71474425-71474227 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 5, 123 |
| Conread position: | 1-200 |
| Cow position: | chr3:54506686-54506887 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-200 |
| Cow position: | chr3:60264737-60264542 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 1-202 |
| Cow position: | chr3:3883836-3883638 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 1-203 |
| Cow position: | chr3:68004723-68004524 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 1-206 |
| Cow position: | chr3:48459350-48459143 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 195 |
| Conread position: | 1-206 |
| Cow position: | chr3:59299553-59299763 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 10, 100 |
| Conread position: | 1-207 |
| Cow position: | chr3:23105383-23105177 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 8, 115 |
| Conread position: | 1-210 |
| Cow position: | chr3:31350125-31349917 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 1-212 |
| Cow position: | chr3:69785646-69785427 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-214 |
| Cow position: | chr3:22165436-22165222 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 1-214 |
| Cow position: | chr3:22924396-22924186 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 1-214 |
| Cow position: | chr3:49363088-49363300 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 191 |
| Conread position: | 1-214 |
| Cow position: | chr3:55189775-55189554 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-214 |
| Cow position: | chr3:59604825-59605036 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 1-214 |
| Cow position: | chr3:74754304-74754512 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 1-214 |
| Cow position: | chr3:76922684-76922480 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 6, 110 |
| Conread position: | 1-215 |
| Cow position: | chr3:47753205-47753435 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-217 |
| Cow position: | chr3:48072903-48072686 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 11, 161 |
| Conread position: | 1-232 |
| Cow position: | chr3:19788851-19788627 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 162 |
| Conread position: | 2-196 |
| Cow position: | chr3:78092531-78092334 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 78 |
| Conread position: | 2-207 |
| Cow position: | chr3:75107754-75107960 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 123 |
| Conread position: | 7-196 |
| Cow position: | chr3:23132183-23131991 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 7-212 |
| Cow position: | chr3:49344679-49344885 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 156 |
| Conread position: | 7-215 |
| Cow position: | chr3:76155973-76156182 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 106, 186 |
| Conread position: | 10-183 |
| Cow position: | chr3:79196748-79196927 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 10-194 |
| Cow position: | chr3:53222001-53222187 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 10-211 |
| Cow position: | chr3:45211290-45211495 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 10-214 |
| Cow position: | chr3:30940796-30940997 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 10-215 |
| Cow position: | chr3:17058557-17058352 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 192 |
| Conread position: | 10-230 |
| Cow position: | chr3:48468162-48468386 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 64, 84 |
| Conread position: | 11-204 |
| Cow position: | chr3:19709100-19709290 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 12-180 |
| Cow position: | chr3:18607661-18607824 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 12-182 |
| Cow position: | chr3:74079645-74079475 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 12-191 |
| Cow position: | chr3:68616336-68616163 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 12-198 |
| Cow position: | chr3:41510567-41510756 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 185 |
| Conread position: | 12-200 |
| Cow position: | chr3:74234177-74234361 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 100, 150 |
| Conread position: | 12-203 |
| Cow position: | chr3:15950922-15950733 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 153, 82 |
| Conread position: | 12-203 |
| Cow position: | chr3:78077176-78077373 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 187 |
| Conread position: | 12-206 |
| Cow position: | chr3:75479994-75480184 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 26 |
| Conread position: | 12-208 |
| Cow position: | chr3:59474113-59474309 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-210 |
| Cow position: | chr3:59610727-59610528 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 84 |
| Conread position: | 12-213 |
| Cow position: | chr3:7331132-7330943 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 186, 26 |
| Conread position: | 12-213 |
| Cow position: | chr3:55177755-55177558 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 12-214 |
| Cow position: | chr3:12705552-12705355 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 12-214 |
| Cow position: | chr3:17331716-17331914 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 12-226 |
| Cow position: | chr3:50768670-50768885 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 101, 192 |
| Conread position: | 12-229 |
| Cow position: | chr3:33002378-33002593 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 13-185 |
| Cow position: | chr3:26603560-26603380 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 13-190 |
| Cow position: | chr3:53150323-53150504 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 99, 149 |
| Conread position: | 13-199 |
| Cow position: | chr3:18686898-18687080 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 13-200 |
| Cow position: | chr3:75966789-75966600 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 14-199 |
| Cow position: | chr3:31361418-31361603 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 116 |
| Conread position: | 14-225 |
| Cow position: | chr3:31115277-31115077 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 15-200 |
| Cow position: | chr3:8523161-8522974 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 16-215 |
| Cow position: | chr3:53428922-53428719 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 21-195 |
| Cow position: | chr3:52845556-52845730 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 172 |
| Conread position: | 23-202 |
| Cow position: | chr3:45881900-45882082 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 23-206 |
| Cow position: | chr3:68708011-68707836 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 62 |
| Conread position: | 23-214 |
| Cow position: | chr3:22232652-22232472 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 180, 79 |
| Conread position: | 24-195 |
| Cow position: | chr3:43896057-43895887 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 24-202 |
| Cow position: | chr3:76269895-76270070 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 24-210 |
| Cow position: | chr3:83455148-83454965 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 88, 46 |
| Conread position: | 24-214 |
| Cow position: | chr3:26977537-26977729 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 145 |
| Conread position: | 25-200 |
| Cow position: | chr3:74050698-74050526 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 27-203 |
| Cow position: | chr3:7661858-7662041 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 27-206 |
| Cow position: | chr3:44782345-44782524 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 75 |
| Conread position: | 27-221 |
| Cow position: | chr3:19611346-19611148 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 32-195 |
| Cow position: | chr3:8061137-8061296 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 38-197 |
| Cow position: | chr3:23408341-23408186 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 38-199 |
| Cow position: | chr3:57274076-57274238 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 38-226 |
| Cow position: | chr3:15160537-15160727 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 169, 77 |
| Conread position: | 39-203 |
| Cow position: | chr3:77098805-77098640 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 40-197 |
| Cow position: | chr3:2636968-2637122 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 40-198 |
| Cow position: | chr3:48363091-48363247 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 40-212 |
| Cow position: | chr3:15051932-15051761 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 158 |
| Conread position: | 40-213 |
| Cow position: | chr3:26681795-26681626 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 72, 121 |
| Conread position: | 41-210 |
| Cow position: | chr3:58527402-58527568 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 51-211 |
| Cow position: | chr3:27274558-27274718 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 61, 143 |
| Conread position: | 71-206 |
| Cow position: | chr3:77650633-77650768 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 114 |
| Conread position: | 147-391 |
| Cow position: | chr3:84112714-84112963 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 97, 54 |
| Conread position: | 147-473 |
| Cow position: | chr3:6688097-6688437 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 137, 28 |
| Conread position: | 147-473 |
| Cow position: | chr3:14862491-14862828 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 147-473 |
| Cow position: | chr3:18461832-18461500 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 181-471 |
| Cow position: | chr3:74850808-74850513 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 143 |
| Conread position: | 181-473 |
| Cow position: | chr3:35886018-35885721 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 181-473 |
| Cow position: | chr3:66622540-66622838 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 182-473 |
| Cow position: | chr3:25688970-25689276 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 20 |
| Conread position: | 183-401 |
| Cow position: | chr3:76004475-76004249 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 147 |
| Conread position: | 187-467 |
| Cow position: | chr3:77580944-77581232 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 187-473 |
| Cow position: | chr3:23288010-23287712 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 187-473 |
| Cow position: | chr3:50124671-50124373 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 189-473 |
| Cow position: | chr3:21004141-21004437 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 142 |
| Conread position: | 192-389 |
| Cow position: | chr3:46504896-46505099 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 136 |
| Conread position: | 192-418 |
| Cow position: | chr3:63278289-63278071 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 195-473 |
| Cow position: | chr3:45976832-45977126 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 137 |
| Conread position: | 195-473 |
| Cow position: | chr3:48525076-48525365 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 141 |
| Conread position: | 196-473 |
| Cow position: | chr3:7477590-7477299 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 124 |
| Conread position: | 196-473 |
| Cow position: | chr3:59863889-59864178 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 13, 140 |
| Conread position: | 199-473 |
| Cow position: | chr3:3982971-3983263 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 201-473 |
| Cow position: | chr3:66969542-66969257 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 42, 129 |
| Conread position: | 208-473 |
| Cow position: | chr3:3525390-3525651 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 208-473 |
| Cow position: | chr3:6382581-6382861 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:18113342-18113064 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 124 |
| Conread position: | 208-473 |
| Cow position: | chr3:18861787-18862066 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 208-473 |
| Cow position: | chr3:19754617-19754337 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 208-473 |
| Cow position: | chr3:19798808-19798529 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:19882820-19883099 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:20380365-20380094 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 44, 118 |
| Conread position: | 208-473 |
| Cow position: | chr3:24264545-24264825 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 124 |
| Conread position: | 208-473 |
| Cow position: | chr3:29328938-29328659 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:29581009-29581285 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 205 |
| Conread position: | 208-473 |
| Cow position: | chr3:30616592-30616314 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 208-473 |
| Cow position: | chr3:32620697-32620418 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:37971396-37971667 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:41208251-41207973 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:42151440-42151164 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 208-473 |
| Cow position: | chr3:43190926-43190647 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 208-473 |
| Cow position: | chr3:48239603-48239880 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 208-473 |
| Cow position: | chr3:53048435-53048156 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 208-473 |
| Cow position: | chr3:54655115-54655393 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 208-473 |
| Cow position: | chr3:57741871-57742150 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 208-473 |
| Cow position: | chr3:58035878-58036151 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 208-473 |
| Cow position: | chr3:68697623-68697344 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:69931489-69931210 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 208-473 |
| Cow position: | chr3:79592484-79592765 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 38, 132 |
| Conread position: | 210-472 |
| Cow position: | chr3:39556227-39555962 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 210-473 |
| Cow position: | chr3:27865522-27865793 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 218-473 |
| Cow position: | chr3:40337785-40337520 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 220-473 |
| Cow position: | chr3:22338277-22338531 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 186, 32 |
| Conread position: | 223-463 |
| Cow position: | chr3:49335578-49335814 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 194, 90 |
| Conread position: | 240-470 |
| Cow position: | chr3:40343435-40343665 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 241-473 |
| Cow position: | chr3:50203933-50204168 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 180, 81 |
| Conread position: | 242-473 |
| Cow position: | chr3:2708483-2708247 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 242-473 |
| Cow position: | chr3:7156323-7156092 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 179, 63 |
| Conread position: | 242-473 |
| Cow position: | chr3:14452046-14452282 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 178, 80 |
| Conread position: | 242-473 |
| Cow position: | chr3:34014729-34014965 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 242-473 |
| Cow position: | chr3:44926213-44926445 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 170, 73 |
| Conread position: | 243-473 |
| Cow position: | chr3:82706910-82706679 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 62 |
| Conread position: | 247-473 |
| Cow position: | chr3:63000962-63000738 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 179, 22 |
| Conread position: | 277-473 |
| Cow position: | chr3:49453423-49453622 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 141, 45 |
| Conread position: | 333-473 |
| Cow position: | chr3:53389172-53389026 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.