Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-189
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 38

Conread position: 1-190
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 1-190
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 22

Conread position: 1-191
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 115

Conread position: 1-195
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 168

Conread position: 1-199
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 38

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 21

Conread position: 1-200
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 196

Conread position: 1-201
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 79

Conread position: 1-202
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 32

Conread position: 1-203
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 77

Conread position: 1-203
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 9, 167

Conread position: 1-203
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 160

Conread position: 1-204
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 41

Conread position: 1-206
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 194, 11

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 14

Conread position: 1-206
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 85

Conread position: 1-209
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 114

Conread position: 1-209
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 1-210
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 179

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 206

Conread position: 1-212
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 8, 199

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 85

Conread position: 1-268
Cow position:
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 193

Conread position: 2-212
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 37

Conread position: 2-226
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 9, 37

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 128

Conread position: 6-195
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 160

Conread position: 6-200
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 9

Conread position: 6-211
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 106, 113

Conread position: 7-178
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 7-191
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 105, 20

Conread position: 7-217
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 9-199
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 9-208
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 29

Conread position: 10-206
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 64

Conread position: 10-214
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 168

Conread position: 12-191
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 12-191
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 12-194
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 151, 86

Conread position: 12-197
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 157

Conread position: 12-199
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 12-200
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 20

Conread position: 12-201
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 186

Conread position: 12-203
Cow position:
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 168

Conread position: 12-205
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 149

Conread position: 12-207
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 29

Conread position: 12-215
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 183

Conread position: 12-215
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 181

Conread position: 13-199
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 25

Conread position: 13-203
Cow position:
Alignm length: 191
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 13-211
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 66

Conread position: 13-213
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 78

Conread position: 14-195
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 32

Conread position: 14-202
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 16-210
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 138

Conread position: 17-195
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 21-206
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 21-212
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 21-215
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 91, 98

Conread position: 22-211
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 75

Conread position: 23-188
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 23-199
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 170

Conread position: 23-203
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 117

Conread position: 23-206
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 25-214
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 35

Conread position: 27-206
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 28

Conread position: 28-204
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 92

Conread position: 29-206
Cow position:
Alignm length: 180
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 71

Conread position: 37-220
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 157

Conread position: 38-199
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 53

Conread position: 38-202
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 38-205
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 10

Conread position: 38-206
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 113

Conread position: 38-207
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 156

Conread position: 38-245
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 193

Conread position: 39-205
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 40-195
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 78

Conread position: 41-212
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 5

Conread position: 41-228
Cow position:
Alignm length: 189
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 168, 63

Conread position: 42-218
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 173, 70

Conread position: 43-237
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 158, 70

Conread position: 59-214
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 79

Conread position: 147-473
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 29

Conread position: 149-473
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 85, 52

Conread position: 152-469
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 62

Conread position: 180-473
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 13, 116

Conread position: 182-473
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 37

Conread position: 187-400
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 14

Conread position: 187-400
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 14

Conread position: 187-457
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 111

Conread position: 187-467
Cow position:
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 145

Conread position: 187-471
Cow position:
Alignm length: 301
Alignm identity: 225
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 14

Conread position: 190-473
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 11

Conread position: 191-473
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 10

Conread position: 195-472
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 47, 28

Conread position: 195-473
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 49, 129

Conread position: 195-473
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 49, 129

Conread position: 199-473
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 65

Conread position: 205-473
Cow position:
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 129

Conread position: 208-471
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 125

Conread position: 208-472
Cow position:
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 21

Conread position: 208-473
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 123

Conread position: 208-473
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 34, 114

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 200
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 123

Conread position: 210-418
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 60

Conread position: 218-472
Cow position:
Alignm length: 278
Alignm identity: 204
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 26, 113

Conread position: 218-473
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 26, 116

Conread position: 218-473
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 103

Conread position: 240-473
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 188, 46

Conread position: 241-471
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 242-470
Cow position:
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 80

Conread position: 242-472
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 177, 80

Conread position: 242-473
Cow position:
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 81

Conread position: 242-473
Cow position:
Alignm length: 236
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 78

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 164, 27

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 170, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 67

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 83

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 179, 73

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 243-471
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 116, 37

Conread position: 244-473
Cow position:
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 78

Conread position: 245-473
Cow position:
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 77

Conread position: 246-473
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 175, 76

Conread position: 250-473
Cow position:
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 7

Conread position: 266-473
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 60

Conread position: 275-473
Cow position:
Alignm length: 205
Alignm identity: 161
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 145, 47

Conread position: 290-472
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 32

Conread position: 290-473
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 131, 32

Conread position: 291-473
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 32

Conread position: 296-473
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 125, 26

Conread position: 305-473
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.