Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-181
Cow position: chr5:12351778-12351599 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 86

Conread position: 1-191
Cow position: chr5:30276719-30276910 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 91

Conread position: 1-191
Cow position: chr5:40109522-40109707 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 46

Conread position: 1-194
Cow position: chr5:43402934-43403135 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 91

Conread position: 1-196
Cow position: chr5:30302924-30303109 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-196
Cow position: chr5:35190139-35190334 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 115

Conread position: 1-198
Cow position: chr5:64176097-64175901 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 114

Conread position: 1-200
Cow position: chr5:34288221-34288023 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 38

Conread position: 1-200
Cow position: chr5:37842250-37842048 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 196

Conread position: 1-200
Cow position: chr5:45845662-45845459 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 197

Conread position: 1-201
Cow position: chr5:65941221-65941016 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 98

Conread position: 1-202
Cow position: chr5:22795246-22795440 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 32

Conread position: 1-202
Cow position: chr5:35684967-35685168 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 38

Conread position: 1-202
Cow position: chr5:56070888-56071091 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 188

Conread position: 1-203
Cow position: chr5:36038972-36038768 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 43

Conread position: 1-203
Cow position: chr5:64139589-64139798 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 138

Conread position: 1-204
Cow position: chr5:46512739-46512532 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 54

Conread position: 1-206
Cow position: chr5:21617487-21617693 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 1-206
Cow position: chr5:21828897-21829101 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 64

Conread position: 1-210
Cow position: chr5:74039974-74039762 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 85

Conread position: 1-213
Cow position: chr5:56028510-56028301 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 1-214
Cow position: chr5:2240960-2240744 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 20

Conread position: 1-214
Cow position: chr5:57074302-57074091 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 161

Conread position: 1-216
Cow position: chr5:73253440-73253652 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 39

Conread position: 1-219
Cow position: chr5:44446836-44446624 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 114

Conread position: 1-227
Cow position: chr5:15363911-15364126 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 112

Conread position: 2-191
Cow position: chr5:69099750-69099942 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 2-203
Cow position: chr5:9894093-9893891 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 164

Conread position: 3-191
Cow position: chr5:30253772-30253963 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 3-229
Cow position: chr5:34915022-34914796 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 192

Conread position: 7-195
Cow position: chr5:6438986-6438799 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 18

Conread position: 7-195
Cow position: chr5:35394397-35394212 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 7-195
Cow position: chr5:51298676-51298488 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 33

Conread position: 7-200
Cow position: chr5:24996186-24995988 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 44

Conread position: 7-206
Cow position: chr5:34562052-34562248 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 106

Conread position: 7-212
Cow position: chr5:60016204-60016407 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 106, 32

Conread position: 7-234
Cow position: chr5:3817651-3817418 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 141

Conread position: 12-186
Cow position: chr5:50600088-50600264 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 12-190
Cow position: chr5:60523776-60523949 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 12-195
Cow position: chr5:33560693-33560511 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 79

Conread position: 12-195
Cow position: chr5:66257680-66257861 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 26

Conread position: 12-199
Cow position: chr5:59626930-59626741 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 102, 73

Conread position: 12-200
Cow position: chr5:17086979-17086785 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 101, 35

Conread position: 12-203
Cow position: chr5:8736238-8736040 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 35

Conread position: 12-203
Cow position: chr5:20288222-20288024 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 182

Conread position: 12-204
Cow position: chr5:54312642-54312835 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 100, 155

Conread position: 12-206
Cow position: chr5:17104894-17105083 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 100, 26

Conread position: 12-206
Cow position: chr5:22667112-22667308 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 12-206
Cow position: chr5:26147632-26147826 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 159

Conread position: 12-206
Cow position: chr5:39035821-39036019 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 100, 72

Conread position: 12-206
Cow position: chr5:42050593-42050781 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 12-211
Cow position: chr5:56014772-56014963 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 12-214
Cow position: chr5:50824633-50824830 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 180, 104

Conread position: 12-214
Cow position: chr5:50943116-50942914 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 102

Conread position: 12-214
Cow position: chr5:69337861-69338062 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 131

Conread position: 12-215
Cow position: chr5:15991598-15991397 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 73

Conread position: 13-189
Cow position: chr5:16893729-16893557 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 85, 0

Conread position: 13-197
Cow position: chr5:12562718-12562531 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 77

Conread position: 13-198
Cow position: chr5:3582602-3582785 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 13-206
Cow position: chr5:57497382-57497188 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 190

Conread position: 13-207
Cow position: chr5:62172454-62172637 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 13-214
Cow position: chr5:1694046-1693848 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 13-214
Cow position: chr5:57062487-57062282 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 89

Conread position: 13-215
Cow position: chr5:2309514-2309311 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 180

Conread position: 13-220
Cow position: chr5:51289549-51289351 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 14-200
Cow position: chr5:12673432-12673247 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 24

Conread position: 14-205
Cow position: chr5:46541010-46540825 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 14-207
Cow position: chr5:42670820-42670634 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 14-215
Cow position: chr5:55041252-55041459 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 14-220
Cow position: chr5:26549097-26548890 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 184, 0

Conread position: 15-203
Cow position: chr5:7676111-7675924 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 178, 0

Conread position: 15-231
Cow position: chr5:38833165-38833374 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 114, 0

Conread position: 22-194
Cow position: chr5:60207759-60207931 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 22-211
Cow position: chr5:69383306-69383494 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 23-186
Cow position: chr5:12434595-12434753 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 23-202
Cow position: chr5:34918398-34918576 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 96

Conread position: 23-221
Cow position: chr5:37253481-37253674 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 24-198
Cow position: chr5:49207274-49207100 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 170

Conread position: 24-212
Cow position: chr5:29599493-29599307 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 164, 90

Conread position: 27-196
Cow position: chr5:21721414-21721248 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 135

Conread position: 37-199
Cow position: chr5:63300144-63300309 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 37-203
Cow position: chr5:9559487-9559647 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 38-190
Cow position: chr5:66287012-66287163 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 145, 0

Conread position: 38-198
Cow position: chr5:34787641-34787801 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 149

Conread position: 38-206
Cow position: chr5:6245596-6245427 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 40-232
Cow position: chr5:67339952-67340147 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 184

Conread position: 40-235
Cow position: chr5:12557218-12557018 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 40-266
Cow position: chr5:72895755-72895983 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 66

Conread position: 44-229
Cow position: chr5:19626651-19626832 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 150

Conread position: 54-200
Cow position: chr5:48104344-48104492 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 57-211
Cow position: chr5:74049910-74050067 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 87-207
Cow position: chr5:12654790-12654670 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 147-351
Cow position: chr5:57001694-57001902 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 54

Conread position: 147-369
Cow position: chr5:26366774-26367002 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 97, 54

Conread position: 149-468
Cow position: chr5:24152829-24153155 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 76

Conread position: 150-472
Cow position: chr5:29768271-29768604 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 147

Conread position: 152-473
Cow position: chr5:70532208-70531880 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 102, 49

Conread position: 183-418
Cow position: chr5:26625978-26625736 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 147

Conread position: 187-383
Cow position: chr5:21523578-21523372 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 143

Conread position: 187-394
Cow position: chr5:58244589-58244377 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 14

Conread position: 187-400
Cow position: chr5:40922461-40922250 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 14

Conread position: 187-418
Cow position: chr5:35988772-35988538 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 14

Conread position: 187-473
Cow position: chr5:7141870-7141572 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position: chr5:34191165-34191452 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 187-473
Cow position: chr5:64779773-64779475 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 194-473
Cow position: chr5:32775057-32775341 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 51

Conread position: 195-473
Cow position: chr5:5105461-5105753 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 136

Conread position: 201-473
Cow position: chr5:68338271-68337963 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 208-390
Cow position: chr5:45702571-45702761 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 116

Conread position: 208-465
Cow position: chr5:41979749-41979996 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 208-471
Cow position: chr5:31099010-31098727 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 121

Conread position: 208-473
Cow position: chr5:6586211-6585932 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr5:12680345-12680061 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position: chr5:27177896-27178176 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 124

Conread position: 208-473
Cow position: chr5:27550209-27549931 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position: chr5:28861893-28861625 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 113

Conread position: 208-473
Cow position: chr5:37379356-37379612 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 208-473
Cow position: chr5:46778771-46779046 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 116

Conread position: 208-473
Cow position: chr5:46792101-46792380 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position: chr5:47341973-47342243 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 41, 123

Conread position: 208-473
Cow position: chr5:49118092-49117822 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position: chr5:62435178-62435453 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position: chr5:73486671-73486394 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 214-473
Cow position: chr5:4349744-4349468 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 115

Conread position: 216-468
Cow position: chr5:40759581-40759314 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 116

Conread position: 217-473
Cow position: chr5:46736021-46735751 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 114

Conread position: 240-471
Cow position: chr5:63313224-63312984 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 173, 82

Conread position: 240-472
Cow position: chr5:25929396-25929162 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 116, 82

Conread position: 241-473
Cow position: chr5:18120181-18119950 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 81

Conread position: 241-473
Cow position: chr5:26095851-26096082 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 72, 83

Conread position: 242-470
Cow position: chr5:29743260-29743031 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 176, 73

Conread position: 242-473
Cow position: chr5:3501831-3501599 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 179, 75

Conread position: 242-473
Cow position: chr5:9003818-9003582 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position: chr5:18249353-18249587 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position: chr5:24100943-24101179 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 276-471
Cow position: chr5:12502837-12502644 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 62, 26

Conread position: 276-472
Cow position: chr5:34525025-34524828 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 144, 51

Conread position: 283-473
Cow position: chr5:57929034-57928843 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 142, 39

Conread position: 286-473
Cow position: chr5:2916802-2916994 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 135, 36

Conread position: 297-473
Cow position: chr5:72346771-72346588 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 24

Conread position: 299-473
Cow position: chr5:10773753-10773575 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 23

Conread position: 315-473
Cow position: chr5:72856247-72856402 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 322-473
Cow position: chr5:41952516-41952680 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 106

Conread position: 370-473
Cow position: chr5:18288502-18288393 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.