Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-181
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 86

Conread position: 1-191
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 91

Conread position: 1-191
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 46

Conread position: 1-194
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 91

Conread position: 1-196
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 1-196
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 115

Conread position: 1-198
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 114

Conread position: 1-200
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 38

Conread position: 1-200
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 196

Conread position: 1-200
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 197

Conread position: 1-201
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 98

Conread position: 1-202
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 32

Conread position: 1-202
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 38

Conread position: 1-202
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 188

Conread position: 1-203
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 10, 43

Conread position: 1-203
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 138

Conread position: 1-204
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 54

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 1-206
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 64

Conread position: 1-210
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 85

Conread position: 1-213
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 1-214
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 20

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 161

Conread position: 1-216
Cow position:
Alignm length: 218
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 39

Conread position: 1-219
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 114

Conread position: 1-227
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 112

Conread position: 2-191
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 2-203
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 164

Conread position: 3-191
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 3-229
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 192

Conread position: 7-195
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 18

Conread position: 7-195
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 7-195
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 33

Conread position: 7-200
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 44

Conread position: 7-206
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 106

Conread position: 7-212
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 106, 32

Conread position: 7-234
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 141

Conread position: 12-186
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 12-190
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 12-195
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 79

Conread position: 12-195
Cow position:
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 26

Conread position: 12-199
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 102, 73

Conread position: 12-200
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 101, 35

Conread position: 12-203
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 35

Conread position: 12-203
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 182

Conread position: 12-204
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 100, 155

Conread position: 12-206
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 100, 26

Conread position: 12-206
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 12-206
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 159

Conread position: 12-206
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 100, 72

Conread position: 12-206
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 12-211
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 12-214
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 180, 104

Conread position: 12-214
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 102

Conread position: 12-214
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 131

Conread position: 12-215
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 73

Conread position: 13-189
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 85, 0

Conread position: 13-197
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 77

Conread position: 13-198
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 13-206
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 190

Conread position: 13-207
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 13-214
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 13-214
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 89

Conread position: 13-215
Cow position:
Alignm length: 205
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 180

Conread position: 13-220
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 14-200
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 24

Conread position: 14-205
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 14-207
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 14-215
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 14-220
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 184, 0

Conread position: 15-203
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 178, 0

Conread position: 15-231
Cow position:
Alignm length: 217
Alignm identity: 146
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 114, 0

Conread position: 22-194
Cow position:
Alignm length: 173
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 22-211
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 23-186
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 23-202
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 96

Conread position: 23-221
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 24-198
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 170

Conread position: 24-212
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 164, 90

Conread position: 27-196
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 135

Conread position: 37-199
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 37-203
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 38-190
Cow position:
Alignm length: 153
Alignm identity: 109
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 145, 0

Conread position: 38-198
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 149

Conread position: 38-206
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 40-232
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 184

Conread position: 40-235
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 40-266
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 81, 66

Conread position: 44-229
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 150

Conread position: 54-200
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 57-211
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 87-207
Cow position:
Alignm length: 121
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 147-351
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 54

Conread position: 147-369
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 97, 54

Conread position: 149-468
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 76

Conread position: 150-472
Cow position:
Alignm length: 342
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 147

Conread position: 152-473
Cow position:
Alignm length: 338
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 102, 49

Conread position: 183-418
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 147

Conread position: 187-383
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 143

Conread position: 187-394
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 59, 14

Conread position: 187-400
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 14

Conread position: 187-418
Cow position:
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 14

Conread position: 187-473
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 194-473
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 51

Conread position: 195-473
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 136

Conread position: 201-473
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 208-390
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 116

Conread position: 208-465
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 208-471
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 121

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 124

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 113

Conread position: 208-473
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 36, 116

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 41, 123

Conread position: 208-473
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 214-473
Cow position:
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 115

Conread position: 216-468
Cow position:
Alignm length: 269
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 116

Conread position: 217-473
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 114

Conread position: 240-471
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 173, 82

Conread position: 240-472
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 116, 82

Conread position: 241-473
Cow position:
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 81

Conread position: 241-473
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 72, 83

Conread position: 242-470
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 176, 73

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 179, 75

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 276-471
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 62, 26

Conread position: 276-472
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 144, 51

Conread position: 283-473
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 142, 39

Conread position: 286-473
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 135, 36

Conread position: 297-473
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 24

Conread position: 299-473
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 23

Conread position: 315-473
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 322-473
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 106

Conread position: 370-473
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.