Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-128
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 1-191
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 11

Conread position: 1-191
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 167

Conread position: 1-194
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 61

Conread position: 1-194
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 98

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 96

Conread position: 1-198
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 119

Conread position: 1-198
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 112

Conread position: 1-199
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 79

Conread position: 1-199
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 194

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 115

Conread position: 1-201
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 41

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 115

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 106

Conread position: 1-205
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 66

Conread position: 1-206
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 60

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 138
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 100

Conread position: 1-206
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 38

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 113

Conread position: 1-209
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 43

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 192

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 114

Conread position: 1-214
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 8, 81

Conread position: 1-216
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 31

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 98

Conread position: 2-194
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 90

Conread position: 3-190
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 58

Conread position: 3-214
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 29

Conread position: 6-200
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 158

Conread position: 9-218
Cow position:
Alignm length: 215
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 10-199
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 28

Conread position: 10-207
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 12-191
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 12-191
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-198
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 100, 185

Conread position: 12-201
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 12-204
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 95, 26

Conread position: 12-204
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 153, 100

Conread position: 12-206
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 59

Conread position: 12-206
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 182, 72

Conread position: 12-211
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 95, 127

Conread position: 12-211
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 55

Conread position: 12-217
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 13-199
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 13-199
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 13-218
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 198

Conread position: 14-213
Cow position:
Alignm length: 202
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 65

Conread position: 16-206
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 148

Conread position: 16-209
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 183

Conread position: 21-186
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-191
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 22-203
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 139, 0

Conread position: 22-207
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 57

Conread position: 22-214
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 91

Conread position: 22-228
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 23-195
Cow position:
Alignm length: 174
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 23-201
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 17

Conread position: 23-203
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 158, 91

Conread position: 23-207
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 178

Conread position: 38-181
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 38-187
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 91

Conread position: 38-203
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 38-208
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 145, 131

Conread position: 38-220
Cow position:
Alignm length: 183
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 40-194
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 145-473
Cow position:
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 56

Conread position: 152-473
Cow position:
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 49

Conread position: 158-453
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 86, 22

Conread position: 169-400
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 11

Conread position: 187-418
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 66, 14

Conread position: 187-465
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 54, 14

Conread position: 187-471
Cow position:
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 16

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 304
Alignm identity: 224
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 61, 21

Conread position: 187-473
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 233, 14

Conread position: 187-473
Cow position:
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 14

Conread position: 195-471
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 136

Conread position: 195-473
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 49, 78

Conread position: 195-473
Cow position:
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 138

Conread position: 196-473
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 133

Conread position: 199-417
Cow position:
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 201-473
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 130

Conread position: 207-472
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 124

Conread position: 208-367
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 74

Conread position: 208-468
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 60

Conread position: 208-471
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 124

Conread position: 208-473
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 38, 130

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 79

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 123

Conread position: 208-473
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 212, 96

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 69

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 122

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 121

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 36, 119

Conread position: 208-473
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 64, 44

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 217-473
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 113

Conread position: 218-473
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 113

Conread position: 241-473
Cow position:
Alignm length: 243
Alignm identity: 186
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 5, 82

Conread position: 241-473
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 174, 81

Conread position: 242-473
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 126, 83

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 179, 70

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 179, 73

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 133, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 78

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 243-469
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 245-473
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 174, 77

Conread position: 253-473
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 168, 69

Conread position: 257-472
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 69

Conread position: 295-473
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 27

Conread position: 309-473
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 13

Show alignments to all cow chromosomes.