Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 1-187
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 115

Conread position: 1-195
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 87

Conread position: 1-195
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 38

Conread position: 1-200
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 201

Conread position: 1-200
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 161

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 38

Conread position: 1-200
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 11

Conread position: 1-202
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 38

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 113

Conread position: 1-203
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 147

Conread position: 1-203
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 84

Conread position: 1-205
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 38

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 114

Conread position: 1-205
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 10, 168

Conread position: 1-206
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 166

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 115

Conread position: 1-206
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 127

Conread position: 1-206
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 122

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 71

Conread position: 1-210
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 8, 60

Conread position: 1-211
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 91

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 118

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 10, 170

Conread position: 1-212
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 199

Conread position: 1-214
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 160

Conread position: 1-218
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 27

Conread position: 1-227
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 51

Conread position: 5-200
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 47

Conread position: 7-187
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 7-211
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 195

Conread position: 7-212
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 7-214
Cow position:
Alignm length: 210
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 76

Conread position: 10-198
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 88

Conread position: 10-199
Cow position:
Alignm length: 191
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 182, 126

Conread position: 10-203
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 184

Conread position: 12-191
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 12-196
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 52

Conread position: 12-200
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 148

Conread position: 12-203
Cow position:
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 26

Conread position: 12-203
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 12-206
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 12-207
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 154

Conread position: 12-207
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 12-214
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 138

Conread position: 12-240
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 224

Conread position: 13-194
Cow position:
Alignm length: 186
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 13-195
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 13-199
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 71

Conread position: 13-204
Cow position:
Alignm length: 192
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 13-206
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 83, 72

Conread position: 13-206
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 152, 45

Conread position: 13-211
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 33

Conread position: 13-214
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 200

Conread position: 13-215
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 66

Conread position: 13-221
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 31

Conread position: 14-182
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 151, 98

Conread position: 14-197
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 16-180
Cow position:
Alignm length: 168
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 19-202
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 22-200
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 173

Conread position: 23-203
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 33

Conread position: 23-219
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 23-225
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 168, 77

Conread position: 27-195
Cow position:
Alignm length: 171
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 76, 167

Conread position: 38-199
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 74, 94

Conread position: 38-206
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 154, 0

Conread position: 38-214
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 39-194
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 42-214
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 147-473
Cow position:
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 149-375
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 99, 52

Conread position: 149-473
Cow position:
Alignm length: 342
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 52

Conread position: 152-404
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 25

Conread position: 160-472
Cow position:
Alignm length: 329
Alignm identity: 235
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 165

Conread position: 187-400
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 14

Conread position: 187-418
Cow position:
Alignm length: 241
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 187-467
Cow position:
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 14

Conread position: 187-473
Cow position:
Alignm length: 304
Alignm identity: 222
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 21

Conread position: 187-473
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 189-472
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 141

Conread position: 189-473
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 50, 141

Conread position: 190-387
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 51, 11

Conread position: 192-394
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 138

Conread position: 192-471
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 139

Conread position: 192-473
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 138

Conread position: 192-473
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 138

Conread position: 195-402
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 46, 133

Conread position: 195-473
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 129

Conread position: 196-471
Cow position:
Alignm length: 293
Alignm identity: 218
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 13, 130

Conread position: 199-473
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 132

Conread position: 201-473
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 130

Conread position: 201-473
Cow position:
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 208-355
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 122

Conread position: 208-391
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 81

Conread position: 208-418
Cow position:
Alignm length: 222
Alignm identity: 173
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 38, 124

Conread position: 208-464
Cow position:
Alignm length: 273
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 123

Conread position: 208-471
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 121

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 36, 91

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 121

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 69

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 36, 123

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 118

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 39, 97

Conread position: 208-473
Cow position:
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 121

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 123

Conread position: 214-473
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 117

Conread position: 218-472
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 106

Conread position: 238-473
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 183, 32

Conread position: 240-473
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 101, 65

Conread position: 242-472
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 179, 32

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 188, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 170, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 22

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 179, 70

Conread position: 242-473
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 83

Conread position: 242-473
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 186, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 83

Conread position: 243-473
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 114, 39

Conread position: 244-473
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 78

Conread position: 244-473
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 115, 87

Conread position: 245-473
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 176, 77

Conread position: 246-473
Cow position:
Alignm length: 228
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 299-473
Cow position:
Alignm length: 181
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 23

Conread position: 302-473
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 20

Conread position: 317-473
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 89, 76

Conread position: 321-473
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 345-473
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.