Cow genome map

Conread name: rret01_b8.y1

Conread position: 1-189
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 163

Conread position: 1-190
Cow position:
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 164

Conread position: 1-191
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 10, 114

Conread position: 1-194
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 78

Conread position: 1-195
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 1-196
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 163

Conread position: 1-200
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 107

Conread position: 1-203
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 38

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 85

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 98

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 180

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 115

Conread position: 1-215
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 193

Conread position: 1-215
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 164

Conread position: 1-217
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 167

Conread position: 1-218
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 1-219
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 47

Conread position: 1-225
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 8, 40

Conread position: 1-228
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 57

Conread position: 2-203
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 7, 37

Conread position: 2-211
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 129

Conread position: 4-195
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 8

Conread position: 7-212
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 187

Conread position: 9-206
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 103, 117

Conread position: 9-207
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 10-198
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 10-200
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 96, 114

Conread position: 10-243
Cow position:
Alignm length: 239
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 204

Conread position: 12-190
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 12-195
Cow position:
Alignm length: 188
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 84, 28

Conread position: 12-196
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 105, 0

Conread position: 12-198
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 12-199
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 12-200
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 12-203
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 12-206
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 125

Conread position: 12-208
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 26

Conread position: 12-209
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 53

Conread position: 12-211
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 181, 0

Conread position: 12-211
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 100, 184

Conread position: 12-212
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 12-214
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 91

Conread position: 12-218
Cow position:
Alignm length: 207
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 12-221
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 182

Conread position: 12-230
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 187

Conread position: 12-233
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 94, 214

Conread position: 12-248
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 106

Conread position: 12-254
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 183

Conread position: 13-190
Cow position:
Alignm length: 178
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 13-194
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 47

Conread position: 13-199
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 107

Conread position: 13-214
Cow position:
Alignm length: 203
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 103

Conread position: 13-214
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 105

Conread position: 13-220
Cow position:
Alignm length: 211
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 188, 101

Conread position: 14-213
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 158

Conread position: 15-198
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 15-214
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 149

Conread position: 15-216
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 91, 77

Conread position: 19-196
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 24

Conread position: 21-195
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 103

Conread position: 21-206
Cow position:
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 22-200
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 23-195
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 24-204
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 25-195
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 97

Conread position: 25-202
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 169

Conread position: 38-203
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 38-206
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 38-206
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 87

Conread position: 38-206
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 158

Conread position: 38-206
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 38-210
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 118

Conread position: 38-243
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 180, 68

Conread position: 41-228
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 29

Conread position: 59-214
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 35

Conread position: 145-473
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 46

Conread position: 147-472
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 107, 54

Conread position: 147-473
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 28

Conread position: 147-473
Cow position:
Alignm length: 342
Alignm identity: 228
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 99, 29

Conread position: 167-473
Cow position:
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 5

Conread position: 180-320
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 28

Conread position: 181-471
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 62, 9

Conread position: 187-459
Cow position:
Alignm length: 289
Alignm identity: 217
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 65, 14

Conread position: 187-460
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 54, 14

Conread position: 187-466
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 13

Conread position: 187-470
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 14

Conread position: 187-471
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 57, 21

Conread position: 187-473
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 14

Conread position: 187-473
Cow position:
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 14

Conread position: 190-471
Cow position:
Alignm length: 294
Alignm identity: 213
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 11

Conread position: 192-473
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 139

Conread position: 195-464
Cow position:
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 139

Conread position: 195-469
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 225, 31

Conread position: 196-473
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 137

Conread position: 201-473
Cow position:
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 201-473
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 130

Conread position: 208-395
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 122

Conread position: 208-403
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 121

Conread position: 208-409
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 121

Conread position: 208-434
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 33, 122

Conread position: 208-451
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 123

Conread position: 208-473
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 56

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 14

Conread position: 208-473
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 7

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 65

Conread position: 208-473
Cow position:
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 126

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 36, 113

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 35, 122

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 112

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 123

Conread position: 208-473
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 123

Conread position: 215-473
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 99

Conread position: 220-472
Cow position:
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 109

Conread position: 221-473
Cow position:
Alignm length: 269
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 111

Conread position: 240-473
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 171, 82

Conread position: 240-473
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 85

Conread position: 241-473
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 180, 81

Conread position: 242-471
Cow position:
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 240
Alignm identity: 177
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 165, 79

Conread position: 242-473
Cow position:
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 80

Conread position: 242-473
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 172, 33

Conread position: 242-473
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 72

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 179, 80

Conread position: 242-473
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 59

Conread position: 243-466
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 23

Conread position: 245-473
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 80

Conread position: 252-473
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 169, 73

Conread position: 267-473
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 153, 41

Show alignments to all cow chromosomes.