Cow genome map
| Conread name: | rret01_b8.y1 |
| Conread position: | 1-189 |
| Cow position: | chr9:33823144-33822952 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 163 |
| Conread position: | 1-190 |
| Cow position: | chr9:43159779-43159589 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 164 |
| Conread position: | 1-191 |
| Cow position: | chr9:17872084-17872274 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 1-194 |
| Cow position: | chr9:12773716-12773524 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 1-195 |
| Cow position: | chr9:17840652-17840850 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-196 |
| Cow position: | chr9:57131521-57131326 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 163 |
| Conread position: | 1-200 |
| Cow position: | chr9:42508858-42508652 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 10, 107 |
| Conread position: | 1-203 |
| Cow position: | chr9:13169637-13169844 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-203 |
| Cow position: | chr9:22440456-22440651 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 1-210 |
| Cow position: | chr9:20091073-20090874 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 1-210 |
| Cow position: | chr9:36628144-36627936 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 98 |
| Conread position: | 1-211 |
| Cow position: | chr9:29006583-29006372 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 180 |
| Conread position: | 1-211 |
| Cow position: | chr9:42586530-42586734 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 115 |
| Conread position: | 1-215 |
| Cow position: | chr9:37199153-37198937 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 193 |
| Conread position: | 1-215 |
| Cow position: | chr9:39011443-39011656 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 164 |
| Conread position: | 1-217 |
| Cow position: | chr9:43202360-43202145 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 167 |
| Conread position: | 1-218 |
| Cow position: | chr9:34374898-34375123 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-219 |
| Cow position: | chr9:5104377-5104602 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 1-225 |
| Cow position: | chr9:8628892-8629115 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 1-228 |
| Cow position: | chr9:41728284-41728058 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 2-203 |
| Cow position: | chr9:51620467-51620265 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 2-211 |
| Cow position: | chr9:4341134-4341343 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 4-195 |
| Cow position: | chr9:40984526-40984334 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 108, 8 |
| Conread position: | 7-212 |
| Cow position: | chr9:34024718-34024513 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 111, 187 |
| Conread position: | 9-206 |
| Cow position: | chr9:45141583-45141777 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 117 |
| Conread position: | 9-207 |
| Cow position: | chr9:19771379-19771177 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 10-198 |
| Cow position: | chr9:41785226-41785048 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 10-200 |
| Cow position: | chr9:61303016-61302828 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 96, 114 |
| Conread position: | 10-243 |
| Cow position: | chr9:60395032-60395269 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 104, 204 |
| Conread position: | 12-190 |
| Cow position: | chr9:40603682-40603501 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 12-195 |
| Cow position: | chr9:53109264-53109081 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 28 |
| Conread position: | 12-196 |
| Cow position: | chr9:19718326-19718506 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 12-198 |
| Cow position: | chr9:24887220-24887031 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 12-199 |
| Cow position: | chr9:9595936-9596125 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 12-200 |
| Cow position: | chr9:55807645-55807458 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 12-203 |
| Cow position: | chr9:59897603-59897418 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 12-206 |
| Cow position: | chr9:6189351-6189545 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 100, 125 |
| Conread position: | 12-208 |
| Cow position: | chr9:21460140-21460336 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 26 |
| Conread position: | 12-209 |
| Cow position: | chr9:32878068-32877873 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 12-211 |
| Cow position: | chr9:28747506-28747704 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 12-211 |
| Cow position: | chr9:34286813-34286612 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 100, 184 |
| Conread position: | 12-212 |
| Cow position: | chr9:38793030-38792826 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-214 |
| Cow position: | chr9:6192445-6192648 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 12-218 |
| Cow position: | chr9:23955966-23956169 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 12-221 |
| Cow position: | chr9:33584671-33584880 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 100, 182 |
| Conread position: | 12-230 |
| Cow position: | chr9:26279155-26279375 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 187 |
| Conread position: | 12-233 |
| Cow position: | chr9:45285521-45285747 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 214 |
| Conread position: | 12-248 |
| Cow position: | chr9:24079316-24079087 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 100, 106 |
| Conread position: | 12-254 |
| Cow position: | chr9:32052290-32052050 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 100, 183 |
| Conread position: | 13-190 |
| Cow position: | chr9:64105912-64105737 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 13-194 |
| Cow position: | chr9:34707299-34707479 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 13-199 |
| Cow position: | chr9:9459998-9459814 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 107 |
| Conread position: | 13-214 |
| Cow position: | chr9:23970883-23971083 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 13-214 |
| Cow position: | chr9:53762707-53762508 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 105 |
| Conread position: | 13-220 |
| Cow position: | chr9:34410383-34410592 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 188, 101 |
| Conread position: | 14-213 |
| Cow position: | chr9:22447282-22447481 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 158 |
| Conread position: | 15-198 |
| Cow position: | chr9:56453349-56453173 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 15-214 |
| Cow position: | chr9:48900825-48901026 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 149 |
| Conread position: | 15-216 |
| Cow position: | chr9:46981216-46981413 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 91, 77 |
| Conread position: | 19-196 |
| Cow position: | chr9:43757543-43757372 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 24 |
| Conread position: | 21-195 |
| Cow position: | chr9:55256547-55256720 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 103 |
| Conread position: | 21-206 |
| Cow position: | chr9:61300972-61301159 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 22-200 |
| Cow position: | chr9:33101111-33101280 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 23-195 |
| Cow position: | chr9:61022626-61022450 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 24-204 |
| Cow position: | chr9:26394347-26394528 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 25-195 |
| Cow position: | chr9:11098451-11098622 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 81, 97 |
| Conread position: | 25-202 |
| Cow position: | chr9:11380645-11380822 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 169 |
| Conread position: | 38-203 |
| Cow position: | chr9:12269018-12268856 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 38-206 |
| Cow position: | chr9:17719250-17719092 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 38-206 |
| Cow position: | chr9:44918292-44918459 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 38-206 |
| Cow position: | chr9:53323796-53323967 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 158 |
| Conread position: | 38-206 |
| Cow position: | chr9:64140571-64140747 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 38-210 |
| Cow position: | chr9:28773127-28772955 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 118 |
| Conread position: | 38-243 |
| Cow position: | chr9:18380853-18380648 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 180, 68 |
| Conread position: | 41-228 |
| Cow position: | chr9:11447823-11448008 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 59-214 |
| Cow position: | chr9:8066076-8066229 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 106, 35 |
| Conread position: | 145-473 |
| Cow position: | chr9:20940714-20941053 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 46 |
| Conread position: | 147-472 |
| Cow position: | chr9:9198377-9198699 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 147-473 |
| Cow position: | chr9:2807098-2806760 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 147-473 |
| Cow position: | chr9:2835734-2835398 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 99, 29 |
| Conread position: | 167-473 |
| Cow position: | chr9:1992257-1991939 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 5 |
| Conread position: | 180-320 |
| Cow position: | chr9:18108052-18108195 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 28 |
| Conread position: | 181-471 |
| Cow position: | chr9:2552128-2551825 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 187-459 |
| Cow position: | chr9:27037409-27037694 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 187-460 |
| Cow position: | chr9:64006143-64005859 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 187-466 |
| Cow position: | chr9:26082022-26081732 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 187-470 |
| Cow position: | chr9:59196154-59196448 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 187-471 |
| Cow position: | chr9:31113455-31113748 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 187-473 |
| Cow position: | chr9:2288836-2288537 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 187-473 |
| Cow position: | chr9:17632771-17633074 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 187-473 |
| Cow position: | chr9:52409003-52408725 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 14 |
| Conread position: | 190-471 |
| Cow position: | chr9:43666959-43667236 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 192-473 |
| Cow position: | chr9:15053581-15053286 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 195-464 |
| Cow position: | chr9:792010-791725 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 139 |
| Conread position: | 195-469 |
| Cow position: | chr9:1741536-1741260 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 225, 31 |
| Conread position: | 196-473 |
| Cow position: | chr9:59480545-59480252 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 137 |
| Conread position: | 201-473 |
| Cow position: | chr9:5627127-5627415 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 201-473 |
| Cow position: | chr9:27782580-27782294 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 130 |
| Conread position: | 208-395 |
| Cow position: | chr9:51179854-51179659 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 208-403 |
| Cow position: | chr9:5534900-5534696 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 208-409 |
| Cow position: | chr9:28680293-28680501 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 40, 121 |
| Conread position: | 208-434 |
| Cow position: | chr9:1728987-1728751 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 33, 122 |
| Conread position: | 208-451 |
| Cow position: | chr9:27897337-27897592 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 41, 123 |
| Conread position: | 208-473 |
| Cow position: | chr9:826615-826328 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 208-473 |
| Cow position: | chr9:1983136-1983414 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 208-473 |
| Cow position: | chr9:3389464-3389198 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 7 |
| Conread position: | 208-473 |
| Cow position: | chr9:7059745-7059466 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 208-473 |
| Cow position: | chr9:10939041-10939321 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 208-473 |
| Cow position: | chr9:22441813-22442085 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 208-473 |
| Cow position: | chr9:22655131-22655410 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 208-473 |
| Cow position: | chr9:28356883-28357161 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 208-473 |
| Cow position: | chr9:28658731-28658453 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 208-473 |
| Cow position: | chr9:30829073-30829348 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 208-473 |
| Cow position: | chr9:31418186-31417908 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 208-473 |
| Cow position: | chr9:43302902-43302623 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 123 |
| Conread position: | 208-473 |
| Cow position: | chr9:44167912-44168186 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 208-473 |
| Cow position: | chr9:44203751-44203473 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 34, 123 |
| Conread position: | 208-473 |
| Cow position: | chr9:48795975-48795696 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 215-473 |
| Cow position: | chr9:1998980-1998719 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 220-472 |
| Cow position: | chr9:6251600-6251866 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 221-473 |
| Cow position: | chr9:26054379-26054644 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 240-473 |
| Cow position: | chr9:11504031-11504269 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 171, 82 |
| Conread position: | 240-473 |
| Cow position: | chr9:26569626-26569861 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 118, 85 |
| Conread position: | 241-473 |
| Cow position: | chr9:45875879-45876116 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 180, 81 |
| Conread position: | 242-471 |
| Cow position: | chr9:30282650-30282416 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 242-473 |
| Cow position: | chr9:1098954-1099190 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 242-473 |
| Cow position: | chr9:3310979-3311215 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 242-473 |
| Cow position: | chr9:3545188-3545424 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 165, 79 |
| Conread position: | 242-473 |
| Cow position: | chr9:10856383-10856616 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 80 |
| Conread position: | 242-473 |
| Cow position: | chr9:17303606-17303376 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 172, 33 |
| Conread position: | 242-473 |
| Cow position: | chr9:27929834-27930071 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 72 |
| Conread position: | 242-473 |
| Cow position: | chr9:30674431-30674667 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 242-473 |
| Cow position: | chr9:34240739-34240503 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 242-473 |
| Cow position: | chr9:38678496-38678725 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 243-466 |
| Cow position: | chr9:20314576-20314801 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 113, 23 |
| Conread position: | 245-473 |
| Cow position: | chr9:9015438-9015670 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 80 |
| Conread position: | 252-473 |
| Cow position: | chr9:2496355-2496131 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 169, 73 |
| Conread position: | 267-473 |
| Cow position: | chr9:20529763-20529972 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 153, 41 |
Show alignments to all cow chromosomes.