Cow genome map

Conread name: rret07_p14.y1

Conread position: 277-508
Cow position: chr1:12884544-12884313 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 25

Conread position: 281-499
Cow position: chr1:92661699-92661486 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 91, 21

Conread position: 282-475
Cow position: chr1:95872645-95872455 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 7

Conread position: 283-488
Cow position: chr1:25835473-25835682 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 148, 85

Conread position: 283-518
Cow position: chr1:52085411-52085187 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 97, 19

Conread position: 284-431
Cow position: chr1:34324990-34324847 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 76

Conread position: 284-432
Cow position: chr1:50272534-50272377 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 284-433
Cow position: chr1:32607741-32607892 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 284-433
Cow position: chr1:58690823-58690971 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 284-435
Cow position: chr1:24240956-24240804 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 59

Conread position: 284-436
Cow position: chr1:21932678-21932527 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 51

Conread position: 284-459
Cow position: chr1:81370650-81370826 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 72, 51

Conread position: 284-473
Cow position: chr1:53703702-53703516 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 87, 17

Conread position: 284-477
Cow position: chr1:49182078-49182274 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 114

Conread position: 284-478
Cow position: chr1:72791231-72791428 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 53

Conread position: 284-486
Cow position: chr1:33538349-33538553 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 113, 77

Conread position: 284-486
Cow position: chr1:42505349-42505144 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 157

Conread position: 284-487
Cow position: chr1:779692-779898 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 100

Conread position: 284-493
Cow position: chr1:79466013-79466220 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 63

Conread position: 284-498
Cow position: chr1:24222328-24222540 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 63

Conread position: 284-498
Cow position: chr1:47023788-47023582 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 128, 37

Conread position: 284-498
Cow position: chr1:49961848-49961639 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 137, 47

Conread position: 284-499
Cow position: chr1:70035249-70035456 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 17

Conread position: 284-499
Cow position: chr1:78069439-78069225 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 49

Conread position: 284-500
Cow position: chr1:52066229-52066428 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 167, 52

Conread position: 284-500
Cow position: chr1:84778207-84778422 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 84, 63

Conread position: 284-504
Cow position: chr1:43218233-43218451 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 87, 56

Conread position: 284-506
Cow position: chr1:5540984-5540760 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 88, 24

Conread position: 284-506
Cow position: chr1:58881959-58881738 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 75, 18

Conread position: 284-510
Cow position: chr1:13245721-13245500 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 165, 18

Conread position: 284-517
Cow position: chr1:39627961-39627722 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 80, 69

Conread position: 284-519
Cow position: chr1:31274262-31274026 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 87, 115

Conread position: 284-520
Cow position: chr1:1743244-1743006 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 90, 219

Conread position: 284-520
Cow position: chr1:88482668-88482909 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 144

Conread position: 284-520
Cow position: chr1:99858272-99858513 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 83, 191

Conread position: 285-472
Cow position: chr1:58194832-58194644 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 88, 46

Conread position: 285-506
Cow position: chr1:53755061-53755271 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 101

Conread position: 286-493
Cow position: chr1:37432358-37432568 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 86, 16

Conread position: 286-499
Cow position: chr1:71146902-71146685 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 129

Conread position: 286-506
Cow position: chr1:11424959-11424734 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 174

Conread position: 286-506
Cow position: chr1:14648693-14648476 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 123, 61

Conread position: 286-506
Cow position: chr1:85867154-85867375 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 105

Conread position: 286-514
Cow position: chr1:19554403-19554633 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 117

Conread position: 286-520
Cow position: chr1:46398226-46398462 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 165, 213

Conread position: 287-482
Cow position: chr1:15366905-15366707 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 77, 108

Conread position: 287-504
Cow position: chr1:6322272-6322481 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 160, 60

Conread position: 287-516
Cow position: chr1:79915569-79915799 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 205

Conread position: 287-520
Cow position: chr1:6717369-6717134 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 95, 217

Conread position: 295-470
Cow position: chr1:33441683-33441509 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 106

Conread position: 295-500
Cow position: chr1:16299410-16299614 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 33, 86

Conread position: 295-506
Cow position: chr1:22440330-22440543 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 135, 107

Conread position: 295-506
Cow position: chr1:39559994-39559782 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 47, 143

Conread position: 295-520
Cow position: chr1:97538080-97538314 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 68, 215

Conread position: 297-505
Cow position: chr1:65073661-65073455 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 75, 31

Conread position: 297-506
Cow position: chr1:64973947-64974157 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 171

Conread position: 297-513
Cow position: chr1:42315982-42315780 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 9

Conread position: 297-520
Cow position: chr1:18484398-18484171 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 113

Conread position: 299-502
Cow position: chr1:5577449-5577246 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 44

Conread position: 299-517
Cow position: chr1:77452433-77452655 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 206

Conread position: 304-475
Cow position: chr1:63624995-63624835 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 304-499
Cow position: chr1:5215413-5215221 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 17

Conread position: 304-500
Cow position: chr1:68856306-68856495 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 54

Conread position: 304-505
Cow position: chr1:39715354-39715161 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 27

Conread position: 304-506
Cow position: chr1:83039232-83039429 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 10

Conread position: 305-498
Cow position: chr1:77388051-77387859 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 98

Conread position: 306-501
Cow position: chr1:6456114-6455925 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 306-513
Cow position: chr1:25014689-25014889 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 110, 55

Conread position: 307-433
Cow position: chr1:84526326-84526461 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 308-499
Cow position: chr1:85529096-85528896 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 308-506
Cow position: chr1:20077842-20077640 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 103

Conread position: 308-508
Cow position: chr1:45858833-45859030 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 141, 23

Conread position: 310-450
Cow position: chr1:55050426-55050565 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 50

Conread position: 313-516
Cow position: chr1:20838787-20838992 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 34

Conread position: 314-519
Cow position: chr1:52578757-52578964 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 86

Conread position: 315-473
Cow position: chr1:62301588-62301429 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 138, 0

Conread position: 319-478
Cow position: chr1:23310792-23310955 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 14

Conread position: 327-506
Cow position: chr1:100094718-100094542 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 16

Conread position: 330-475
Cow position: chr1:98554400-98554556 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 330-507
Cow position: chr1:54631200-54631021 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 56

Conread position: 333-506
Cow position: chr1:31806319-31806491 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 76

Conread position: 336-466
Cow position: chr1:99470670-99470541 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 113, 41

Conread position: 340-515
Cow position: chr1:97582367-97582545 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 35, 173

Conread position: 344-502
Cow position: chr1:22725228-22725066 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 347-499
Cow position: chr1:86708431-86708279 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 101, 23

Conread position: 356-506
Cow position: chr1:53921934-53922084 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 95

Show alignments to all cow chromosomes.