Cow genome map
Conread name: | rret07_p14.y1 |
Conread position: | 277-508 |
Cow position: | chr1:12884544-12884313 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 173 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 91, 25 |
Conread position: | 281-499 |
Cow position: | chr1:92661699-92661486 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 166 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 91, 21 |
Conread position: | 282-475 |
Cow position: | chr1:95872645-95872455 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 114, 7 |
Conread position: | 283-488 |
Cow position: | chr1:25835473-25835682 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 160 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 148, 85 |
Conread position: | 283-518 |
Cow position: | chr1:52085411-52085187 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 185 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 97, 19 |
Conread position: | 284-431 |
Cow position: | chr1:34324990-34324847 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 11, 76 |
Conread position: | 284-432 |
Cow position: | chr1:50272534-50272377 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 127 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 284-433 |
Cow position: | chr1:32607741-32607892 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 119 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 284-433 |
Cow position: | chr1:58690823-58690971 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 110 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 284-435 |
Cow position: | chr1:24240956-24240804 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 78, 59 |
Conread position: | 284-436 |
Cow position: | chr1:21932678-21932527 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 77, 51 |
Conread position: | 284-459 |
Cow position: | chr1:81370650-81370826 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 72, 51 |
Conread position: | 284-473 |
Cow position: | chr1:53703702-53703516 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 155 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 87, 17 |
Conread position: | 284-477 |
Cow position: | chr1:49182078-49182274 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 143 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 19, 114 |
Conread position: | 284-478 |
Cow position: | chr1:72791231-72791428 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 144 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 33, 53 |
Conread position: | 284-486 |
Cow position: | chr1:33538349-33538553 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 156 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 113, 77 |
Conread position: | 284-486 |
Cow position: | chr1:42505349-42505144 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 164 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 31, 157 |
Conread position: | 284-487 |
Cow position: | chr1:779692-779898 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 159 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 22, 100 |
Conread position: | 284-493 |
Cow position: | chr1:79466013-79466220 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 86, 63 |
Conread position: | 284-498 |
Cow position: | chr1:24222328-24222540 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 159 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 85, 63 |
Conread position: | 284-498 |
Cow position: | chr1:47023788-47023582 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 157 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 128, 37 |
Conread position: | 284-498 |
Cow position: | chr1:49961848-49961639 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 165 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 137, 47 |
Conread position: | 284-499 |
Cow position: | chr1:70035249-70035456 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 156 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 110, 17 |
Conread position: | 284-499 |
Cow position: | chr1:78069439-78069225 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 78, 49 |
Conread position: | 284-500 |
Cow position: | chr1:52066229-52066428 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 163 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 167, 52 |
Conread position: | 284-500 |
Cow position: | chr1:84778207-84778422 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 168 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 84, 63 |
Conread position: | 284-504 |
Cow position: | chr1:43218233-43218451 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 166 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 87, 56 |
Conread position: | 284-506 |
Cow position: | chr1:5540984-5540760 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 166 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 88, 24 |
Conread position: | 284-506 |
Cow position: | chr1:58881959-58881738 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 168 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 75, 18 |
Conread position: | 284-510 |
Cow position: | chr1:13245721-13245500 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 165 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 165, 18 |
Conread position: | 284-517 |
Cow position: | chr1:39627961-39627722 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 180 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 80, 69 |
Conread position: | 284-519 |
Cow position: | chr1:31274262-31274026 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 177 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 87, 115 |
Conread position: | 284-520 |
Cow position: | chr1:1743244-1743006 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 180 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 90, 219 |
Conread position: | 284-520 |
Cow position: | chr1:88482668-88482909 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 167 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 35, 144 |
Conread position: | 284-520 |
Cow position: | chr1:99858272-99858513 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 83, 191 |
Conread position: | 285-472 |
Cow position: | chr1:58194832-58194644 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 153 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 88, 46 |
Conread position: | 285-506 |
Cow position: | chr1:53755061-53755271 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 172 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 86, 101 |
Conread position: | 286-493 |
Cow position: | chr1:37432358-37432568 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 162 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 86, 16 |
Conread position: | 286-499 |
Cow position: | chr1:71146902-71146685 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 162 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 35, 129 |
Conread position: | 286-506 |
Cow position: | chr1:11424959-11424734 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 161 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 70, 174 |
Conread position: | 286-506 |
Cow position: | chr1:14648693-14648476 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 162 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 123, 61 |
Conread position: | 286-506 |
Cow position: | chr1:85867154-85867375 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 105 |
Conread position: | 286-514 |
Cow position: | chr1:19554403-19554633 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 159 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 77, 117 |
Conread position: | 286-520 |
Cow position: | chr1:46398226-46398462 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 165 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 165, 213 |
Conread position: | 287-482 |
Cow position: | chr1:15366905-15366707 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 77, 108 |
Conread position: | 287-504 |
Cow position: | chr1:6322272-6322481 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 160, 60 |
Conread position: | 287-516 |
Cow position: | chr1:79915569-79915799 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 169 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 83, 205 |
Conread position: | 287-520 |
Cow position: | chr1:6717369-6717134 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 173 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 95, 217 |
Conread position: | 295-470 |
Cow position: | chr1:33441683-33441509 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 136 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 76, 106 |
Conread position: | 295-500 |
Cow position: | chr1:16299410-16299614 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 161 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 33, 86 |
Conread position: | 295-506 |
Cow position: | chr1:22440330-22440543 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 161 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 135, 107 |
Conread position: | 295-506 |
Cow position: | chr1:39559994-39559782 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 47, 143 |
Conread position: | 295-520 |
Cow position: | chr1:97538080-97538314 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 177 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 68, 215 |
Conread position: | 297-505 |
Cow position: | chr1:65073661-65073455 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 75, 31 |
Conread position: | 297-506 |
Cow position: | chr1:64973947-64974157 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 160 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 78, 171 |
Conread position: | 297-513 |
Cow position: | chr1:42315982-42315780 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 162 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 83, 9 |
Conread position: | 297-520 |
Cow position: | chr1:18484398-18484171 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 70, 113 |
Conread position: | 299-502 |
Cow position: | chr1:5577449-5577246 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 152 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 72, 44 |
Conread position: | 299-517 |
Cow position: | chr1:77452433-77452655 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 156 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 61, 206 |
Conread position: | 304-475 |
Cow position: | chr1:63624995-63624835 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 132 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 304-499 |
Cow position: | chr1:5215413-5215221 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 146 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 59, 17 |
Conread position: | 304-500 |
Cow position: | chr1:68856306-68856495 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 145 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 38, 54 |
Conread position: | 304-505 |
Cow position: | chr1:39715354-39715161 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 159 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 69, 27 |
Conread position: | 304-506 |
Cow position: | chr1:83039232-83039429 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 151 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 67, 10 |
Conread position: | 305-498 |
Cow position: | chr1:77388051-77387859 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 138 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 89, 98 |
Conread position: | 306-501 |
Cow position: | chr1:6456114-6455925 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 306-513 |
Cow position: | chr1:25014689-25014889 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 167 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 110, 55 |
Conread position: | 307-433 |
Cow position: | chr1:84526326-84526461 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 308-499 |
Cow position: | chr1:85529096-85528896 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 139 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 308-506 |
Cow position: | chr1:20077842-20077640 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 53, 103 |
Conread position: | 308-508 |
Cow position: | chr1:45858833-45859030 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 163 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 141, 23 |
Conread position: | 310-450 |
Cow position: | chr1:55050426-55050565 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 68, 50 |
Conread position: | 313-516 |
Cow position: | chr1:20838787-20838992 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 69, 34 |
Conread position: | 314-519 |
Cow position: | chr1:52578757-52578964 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 149 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 145, 86 |
Conread position: | 315-473 |
Cow position: | chr1:62301588-62301429 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 131 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 319-478 |
Cow position: | chr1:23310792-23310955 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 54, 14 |
Conread position: | 327-506 |
Cow position: | chr1:100094718-100094542 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 6, 16 |
Conread position: | 330-475 |
Cow position: | chr1:98554400-98554556 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 330-507 |
Cow position: | chr1:54631200-54631021 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 39, 56 |
Conread position: | 333-506 |
Cow position: | chr1:31806319-31806491 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 39, 76 |
Conread position: | 336-466 |
Cow position: | chr1:99470670-99470541 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 110 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 113, 41 |
Conread position: | 340-515 |
Cow position: | chr1:97582367-97582545 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 134 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 35, 173 |
Conread position: | 344-502 |
Cow position: | chr1:22725228-22725066 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 118 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 347-499 |
Cow position: | chr1:86708431-86708279 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 111 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 101, 23 |
Conread position: | 356-506 |
Cow position: | chr1:53921934-53922084 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 17, 95 |
Show alignments to all cow chromosomes.