Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 270-498 |
| Cow position: | chr10:26731062-26730831 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 43 |
| Conread position: | 271-515 |
| Cow position: | chr10:26014215-26013980 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 126, 60 |
| Conread position: | 276-449 |
| Cow position: | chr10:31051960-31052131 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 84 |
| Conread position: | 284-413 |
| Cow position: | chr10:19597189-19597058 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 284-422 |
| Cow position: | chr10:27132675-27132538 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 284-435 |
| Cow position: | chr10:20507870-20507719 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 66, 104 |
| Conread position: | 284-464 |
| Cow position: | chr10:20775381-20775553 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 99 |
| Conread position: | 284-475 |
| Cow position: | chr10:32532361-32532557 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 284-497 |
| Cow position: | chr10:57773720-57773935 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 112, 77 |
| Conread position: | 284-498 |
| Cow position: | chr10:41085280-41085490 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 169, 46 |
| Conread position: | 284-498 |
| Cow position: | chr10:64219684-64219482 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 26 |
| Conread position: | 284-499 |
| Cow position: | chr10:30721339-30721556 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 284-499 |
| Cow position: | chr10:48657034-48656816 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 284-500 |
| Cow position: | chr10:1004683-1004902 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 86, 133 |
| Conread position: | 284-505 |
| Cow position: | chr10:50119953-50120170 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 284-506 |
| Cow position: | chr10:36425070-36424849 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 124 |
| Conread position: | 284-506 |
| Cow position: | chr10:39244896-39244674 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 82, 47 |
| Conread position: | 284-506 |
| Cow position: | chr10:46000112-45999905 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 284-506 |
| Cow position: | chr10:46451710-46451483 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 284-506 |
| Cow position: | chr10:54824956-54824731 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 86, 105 |
| Conread position: | 284-506 |
| Cow position: | chr10:57503742-57503962 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 284-510 |
| Cow position: | chr10:50162857-50163086 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 284-515 |
| Cow position: | chr10:50964064-50964294 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 284-518 |
| Cow position: | chr10:58492255-58492023 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 113, 88 |
| Conread position: | 284-520 |
| Cow position: | chr10:48568855-48568613 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 284-520 |
| Cow position: | chr10:52132270-52132506 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 285-499 |
| Cow position: | chr10:5744951-5744743 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 89, 97 |
| Conread position: | 285-499 |
| Cow position: | chr10:53443059-53443274 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 285-505 |
| Cow position: | chr10:28103789-28103570 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 95 |
| Conread position: | 285-520 |
| Cow position: | chr10:29822400-29822639 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 164, 228 |
| Conread position: | 286-469 |
| Cow position: | chr10:19540704-19540515 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 286-498 |
| Cow position: | chr10:33073827-33073612 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 286-499 |
| Cow position: | chr10:7268152-7267943 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 286-499 |
| Cow position: | chr10:16522150-16522369 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 211 |
| Conread position: | 286-499 |
| Cow position: | chr10:29291236-29291449 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 65, 95 |
| Conread position: | 286-520 |
| Cow position: | chr10:48479393-48479163 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 94 |
| Conread position: | 287-499 |
| Cow position: | chr10:28527096-28526881 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 85, 134 |
| Conread position: | 287-514 |
| Cow position: | chr10:39645848-39646064 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 288-499 |
| Cow position: | chr10:64983282-64983072 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 161, 75 |
| Conread position: | 289-511 |
| Cow position: | chr10:60693233-60693470 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 290-448 |
| Cow position: | chr10:2407884-2407728 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 295-520 |
| Cow position: | chr10:4720960-4721199 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 296-506 |
| Cow position: | chr10:7506955-7506742 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 90, 79 |
| Conread position: | 296-511 |
| Cow position: | chr10:58264535-58264319 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 183 |
| Conread position: | 296-515 |
| Cow position: | chr10:23873356-23873141 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 115 |
| Conread position: | 296-519 |
| Cow position: | chr10:57993871-57993648 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 304-487 |
| Cow position: | chr10:40158828-40159009 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 304-498 |
| Cow position: | chr10:49680238-49680435 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 304-506 |
| Cow position: | chr10:3837924-3838129 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 91 |
| Conread position: | 304-520 |
| Cow position: | chr10:50429499-50429709 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 308-516 |
| Cow position: | chr10:6225303-6225101 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 309-499 |
| Cow position: | chr10:30249925-30250114 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 312-519 |
| Cow position: | chr10:60909911-60909711 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 313-493 |
| Cow position: | chr10:26673331-26673521 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 314-515 |
| Cow position: | chr10:35013430-35013624 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 135, 61 |
| Conread position: | 318-514 |
| Cow position: | chr10:42478572-42478382 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 131, 59 |
| Conread position: | 323-499 |
| Cow position: | chr10:270829-271006 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 330-506 |
| Cow position: | chr10:47181570-47181393 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 42, 151 |
| Conread position: | 333-475 |
| Cow position: | chr10:14935544-14935401 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 98 |
| Conread position: | 334-499 |
| Cow position: | chr10:30358088-30357923 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 91 |
| Conread position: | 336-506 |
| Cow position: | chr10:53066855-53066684 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 338-506 |
| Cow position: | chr10:19188538-19188710 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.