Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 271-486 |
| Cow position: | chr12:9450311-9450091 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 283-499 |
| Cow position: | chr12:9746547-9746757 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 166, 91 |
| Conread position: | 284-481 |
| Cow position: | chr12:31805834-31806028 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 165, 91 |
| Conread position: | 284-487 |
| Cow position: | chr12:36304149-36304363 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 284-499 |
| Cow position: | chr12:42466814-42467029 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 128 |
| Conread position: | 284-502 |
| Cow position: | chr12:4348016-4347794 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 284-504 |
| Cow position: | chr12:22507792-22508005 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 284-506 |
| Cow position: | chr12:8909164-8908945 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 284-508 |
| Cow position: | chr12:48436745-48436502 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 284-516 |
| Cow position: | chr12:39338112-39338345 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 75, 49 |
| Conread position: | 285-506 |
| Cow position: | chr12:10202274-10202062 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 168, 98 |
| Conread position: | 285-520 |
| Cow position: | chr12:10760867-10760633 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 84, 110 |
| Conread position: | 286-435 |
| Cow position: | chr12:31209053-31209200 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 286-477 |
| Cow position: | chr12:15033987-15033793 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 83, 95 |
| Conread position: | 287-421 |
| Cow position: | chr12:36948861-36948998 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 287-516 |
| Cow position: | chr12:28541783-28542016 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 288-487 |
| Cow position: | chr12:27437650-27437450 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 290-470 |
| Cow position: | chr12:10798560-10798377 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 71, 122 |
| Conread position: | 290-500 |
| Cow position: | chr12:10769502-10769708 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 81, 146 |
| Conread position: | 295-498 |
| Cow position: | chr12:25901690-25901492 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 62, 136 |
| Conread position: | 295-516 |
| Cow position: | chr12:29852561-29852331 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 72, 148 |
| Conread position: | 296-400 |
| Cow position: | chr12:38748287-38748183 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 296-516 |
| Cow position: | chr12:34133403-34133176 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 300-473 |
| Cow position: | chr12:13575276-13575448 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 58, 85 |
| Conread position: | 302-499 |
| Cow position: | chr12:3896565-3896365 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 308-487 |
| Cow position: | chr12:36324121-36323952 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 308-487 |
| Cow position: | chr12:36465926-36465760 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 309-495 |
| Cow position: | chr12:36349620-36349444 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 312-470 |
| Cow position: | chr12:541261-541100 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 318-520 |
| Cow position: | chr12:7089181-7088970 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 184 |
| Conread position: | 320-457 |
| Cow position: | chr12:4734000-4734140 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 331-506 |
| Cow position: | chr12:27970697-27970876 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 335-497 |
| Cow position: | chr12:40206840-40207002 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 338-487 |
| Cow position: | chr12:36409648-36409504 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 338-499 |
| Cow position: | chr12:37898445-37898286 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 356-502 |
| Cow position: | chr12:12869717-12869864 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 385-504 |
| Cow position: | chr12:24009424-24009306 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 111, 65 |
Show alignments to all cow chromosomes.