Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 273-480 |
| Cow position: | chr14:35002723-35002939 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 283-499 |
| Cow position: | chr14:48937530-48937315 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 284-433 |
| Cow position: | chr14:43380354-43380203 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 284-456 |
| Cow position: | chr14:16715548-16715370 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 159 |
| Conread position: | 284-462 |
| Cow position: | chr14:22855065-22855255 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 284-466 |
| Cow position: | chr14:50015310-50015127 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 284-471 |
| Cow position: | chr14:9921052-9920863 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 81, 26 |
| Conread position: | 284-477 |
| Cow position: | chr14:21380211-21380020 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 169, 45 |
| Conread position: | 284-479 |
| Cow position: | chr14:34060017-34060201 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 284-486 |
| Cow position: | chr14:12952123-12952328 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 284-488 |
| Cow position: | chr14:43484724-43484519 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 54 |
| Conread position: | 284-499 |
| Cow position: | chr14:15239131-15239349 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 284-506 |
| Cow position: | chr14:19542395-19542618 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 85, 96 |
| Conread position: | 284-507 |
| Cow position: | chr14:25346452-25346235 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 167, 69 |
| Conread position: | 284-511 |
| Cow position: | chr14:13361422-13361639 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 284-512 |
| Cow position: | chr14:35434864-35435084 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 167, 63 |
| Conread position: | 285-481 |
| Cow position: | chr14:41960454-41960262 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 285-506 |
| Cow position: | chr14:44204978-44205206 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 285-516 |
| Cow position: | chr14:28574900-28574673 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 164, 87 |
| Conread position: | 285-519 |
| Cow position: | chr14:49645215-49644979 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 85, 216 |
| Conread position: | 286-427 |
| Cow position: | chr14:40752995-40753134 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 16 |
| Conread position: | 286-475 |
| Cow position: | chr14:18323681-18323875 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 126 |
| Conread position: | 286-518 |
| Cow position: | chr14:35734975-35735213 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 82, 222 |
| Conread position: | 287-499 |
| Cow position: | chr14:45611396-45611168 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 293-520 |
| Cow position: | chr14:28690183-28689971 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 158, 47 |
| Conread position: | 295-466 |
| Cow position: | chr14:37331550-37331384 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 295-502 |
| Cow position: | chr14:22000126-21999925 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 295-506 |
| Cow position: | chr14:38542927-38542715 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 296-473 |
| Cow position: | chr14:43693812-43693990 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 296-507 |
| Cow position: | chr14:38240521-38240318 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 296-518 |
| Cow position: | chr14:23164585-23164797 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 157, 38 |
| Conread position: | 297-472 |
| Cow position: | chr14:40956615-40956793 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 297-516 |
| Cow position: | chr14:7600195-7600415 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 213 |
| Conread position: | 302-426 |
| Cow position: | chr14:37643797-37643670 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 304-516 |
| Cow position: | chr14:25952596-25952798 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 147, 34 |
| Conread position: | 305-465 |
| Cow position: | chr14:20642992-20643154 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 306-520 |
| Cow position: | chr14:35448791-35449001 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 143, 64 |
| Conread position: | 311-503 |
| Cow position: | chr14:18030492-18030683 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 332-506 |
| Cow position: | chr14:20396796-20396965 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 338-499 |
| Cow position: | chr14:4942600-4942759 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 105 |
| Conread position: | 374-512 |
| Cow position: | chr14:9051197-9051056 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.