Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 283-520 |
| Cow position: | chr16:5455607-5455366 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 112 |
| Conread position: | 283-520 |
| Cow position: | chr16:27075523-27075760 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 219 |
| Conread position: | 284-412 |
| Cow position: | chr16:52177296-52177424 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 284-444 |
| Cow position: | chr16:40272092-40272247 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 284-464 |
| Cow position: | chr16:19341426-19341246 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 89 |
| Conread position: | 284-475 |
| Cow position: | chr16:15093216-15093025 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 165, 95 |
| Conread position: | 284-487 |
| Cow position: | chr16:11752018-11752229 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 87, 45 |
| Conread position: | 284-493 |
| Cow position: | chr16:13831571-13831357 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 284-499 |
| Cow position: | chr16:10776067-10775853 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 284-499 |
| Cow position: | chr16:44599201-44599405 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 176, 18 |
| Conread position: | 284-502 |
| Cow position: | chr16:14364852-14364638 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 284-502 |
| Cow position: | chr16:20539536-20539773 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 284-506 |
| Cow position: | chr16:12450898-12450681 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 95, 9 |
| Conread position: | 284-506 |
| Cow position: | chr16:25937887-25938109 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 32 |
| Conread position: | 284-506 |
| Cow position: | chr16:28466905-28466683 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 284-506 |
| Cow position: | chr16:28767533-28767750 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 86, 97 |
| Conread position: | 284-506 |
| Cow position: | chr16:32585845-32585632 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 165, 60 |
| Conread position: | 284-511 |
| Cow position: | chr16:9987930-9987703 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 86, 131 |
| Conread position: | 284-519 |
| Cow position: | chr16:24875055-24874831 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 165, 48 |
| Conread position: | 284-519 |
| Cow position: | chr16:46029953-46030184 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 284-520 |
| Cow position: | chr16:29829181-29828946 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 80, 95 |
| Conread position: | 286-493 |
| Cow position: | chr16:13553228-13553019 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 80, 138 |
| Conread position: | 286-493 |
| Cow position: | chr16:14325350-14325564 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 295-423 |
| Cow position: | chr16:18692886-18692756 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 295-475 |
| Cow position: | chr16:1084384-1084213 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 295-506 |
| Cow position: | chr16:42708373-42708154 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 296-520 |
| Cow position: | chr16:5911312-5911537 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 77, 101 |
| Conread position: | 296-520 |
| Cow position: | chr16:46524143-46523915 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 35 |
| Conread position: | 297-499 |
| Cow position: | chr16:45698553-45698353 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 152, 20 |
| Conread position: | 297-506 |
| Cow position: | chr16:5594264-5594478 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 299-512 |
| Cow position: | chr16:27339721-27339937 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 304-499 |
| Cow position: | chr16:43843352-43843149 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 185 |
| Conread position: | 304-506 |
| Cow position: | chr16:28734786-28734990 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 57 |
| Conread position: | 306-493 |
| Cow position: | chr16:47341432-47341243 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 308-514 |
| Cow position: | chr16:16163340-16163138 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 141, 82 |
| Conread position: | 308-516 |
| Cow position: | chr16:52731511-52731712 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 309-471 |
| Cow position: | chr16:45684693-45684859 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 311-507 |
| Cow position: | chr16:17003810-17004009 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 311-513 |
| Cow position: | chr16:21168264-21168458 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 313-475 |
| Cow position: | chr16:6204953-6204788 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 314-517 |
| Cow position: | chr16:13360521-13360727 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 321-511 |
| Cow position: | chr16:46450795-46450982 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 128, 36 |
| Conread position: | 323-506 |
| Cow position: | chr16:12217325-12217503 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 117, 48 |
| Conread position: | 330-482 |
| Cow position: | chr16:11438723-11438877 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 357-506 |
| Cow position: | chr16:54295110-54295259 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 61 |
| Conread position: | 364-506 |
| Cow position: | chr16:43725873-43726015 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.