Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 273-448 |
| Cow position: | chr2:39819714-39819889 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 283-487 |
| Cow position: | chr2:17231491-17231289 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 81, 64 |
| Conread position: | 283-517 |
| Cow position: | chr2:38383926-38384143 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 166, 50 |
| Conread position: | 284-411 |
| Cow position: | chr2:33503286-33503162 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 284-433 |
| Cow position: | chr2:59996445-59996296 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 130 |
| Conread position: | 284-434 |
| Cow position: | chr2:37996665-37996807 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 284-478 |
| Cow position: | chr2:22132321-22132131 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 166, 87 |
| Conread position: | 284-479 |
| Cow position: | chr2:1138661-1138469 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 284-482 |
| Cow position: | chr2:11534052-11534238 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 284-497 |
| Cow position: | chr2:26879453-26879663 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 284-499 |
| Cow position: | chr2:9412334-9412544 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 169, 63 |
| Conread position: | 284-499 |
| Cow position: | chr2:10362866-10362656 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 86, 122 |
| Conread position: | 284-499 |
| Cow position: | chr2:54469000-54468788 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 73 |
| Conread position: | 284-502 |
| Cow position: | chr2:46271292-46271078 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 155, 63 |
| Conread position: | 284-506 |
| Cow position: | chr2:884189-883960 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 284-506 |
| Cow position: | chr2:58276668-58276882 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 167, 31 |
| Conread position: | 284-506 |
| Cow position: | chr2:58320710-58320491 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 26, 128 |
| Conread position: | 284-508 |
| Cow position: | chr2:15955755-15955540 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 284-511 |
| Cow position: | chr2:21013930-21014147 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 167, 43 |
| Conread position: | 284-512 |
| Cow position: | chr2:51191924-51191691 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 52, 202 |
| Conread position: | 284-515 |
| Cow position: | chr2:79939307-79939077 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 88, 127 |
| Conread position: | 284-516 |
| Cow position: | chr2:37448931-37448688 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 76, 214 |
| Conread position: | 284-518 |
| Cow position: | chr2:53302112-53301884 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 165, 70 |
| Conread position: | 284-520 |
| Cow position: | chr2:4706246-4706473 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 123 |
| Conread position: | 284-520 |
| Cow position: | chr2:10932266-10932495 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 284-520 |
| Cow position: | chr2:62563629-62563393 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 285-502 |
| Cow position: | chr2:4670850-4671078 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 286-459 |
| Cow position: | chr2:62502995-62503170 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 286-486 |
| Cow position: | chr2:18018451-18018252 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 100, 43 |
| Conread position: | 286-499 |
| Cow position: | chr2:33341609-33341396 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 78, 61 |
| Conread position: | 286-501 |
| Cow position: | chr2:31827677-31827466 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 78, 106 |
| Conread position: | 286-520 |
| Cow position: | chr2:56017855-56017623 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 287-477 |
| Cow position: | chr2:4125106-4124914 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 287-515 |
| Cow position: | chr2:60947754-60947973 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 288-433 |
| Cow position: | chr2:48441021-48440877 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 288-506 |
| Cow position: | chr2:67054421-67054207 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 160, 45 |
| Conread position: | 288-519 |
| Cow position: | chr2:61909579-61909348 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 107, 83 |
| Conread position: | 289-464 |
| Cow position: | chr2:51401001-51400822 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 153 |
| Conread position: | 292-448 |
| Cow position: | chr2:45427940-45427781 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 295-444 |
| Cow position: | chr2:25057008-25057159 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 295-477 |
| Cow position: | chr2:717118-716936 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 77, 41 |
| Conread position: | 295-487 |
| Cow position: | chr2:56519090-56518892 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 89, 66 |
| Conread position: | 295-498 |
| Cow position: | chr2:6176620-6176810 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 295-499 |
| Cow position: | chr2:7362059-7362263 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-499 |
| Cow position: | chr2:62222036-62221833 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 155, 63 |
| Conread position: | 295-506 |
| Cow position: | chr2:59611634-59611423 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 295-508 |
| Cow position: | chr2:1437370-1437585 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 74, 192 |
| Conread position: | 295-518 |
| Cow position: | chr2:79075642-79075420 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 36 |
| Conread position: | 295-520 |
| Cow position: | chr2:79240857-79240627 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 188 |
| Conread position: | 297-506 |
| Cow position: | chr2:15242924-15242715 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 78, 117 |
| Conread position: | 298-499 |
| Cow position: | chr2:10989164-10989363 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 60, 148 |
| Conread position: | 304-499 |
| Cow position: | chr2:55678821-55679015 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 143, 43 |
| Conread position: | 304-516 |
| Cow position: | chr2:62064360-62064573 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 67, 93 |
| Conread position: | 305-516 |
| Cow position: | chr2:14589315-14589530 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 305-520 |
| Cow position: | chr2:6053528-6053303 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 306-475 |
| Cow position: | chr2:84132952-84133117 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 124 |
| Conread position: | 308-478 |
| Cow position: | chr2:42592503-42592669 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 310-520 |
| Cow position: | chr2:5716445-5716655 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 144 |
| Conread position: | 318-482 |
| Cow position: | chr2:5329700-5329546 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 131, 59 |
| Conread position: | 324-516 |
| Cow position: | chr2:55377826-55377636 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 330-435 |
| Cow position: | chr2:1486285-1486179 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 104 |
| Conread position: | 330-492 |
| Cow position: | chr2:10486125-10486289 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 332-518 |
| Cow position: | chr2:70707409-70707605 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 336-499 |
| Cow position: | chr2:5761250-5761414 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
Show alignments to all cow chromosomes.