Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 284-497 |
| Cow position: | chr20:10061684-10061470 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 116 |
| Conread position: | 284-499 |
| Cow position: | chr20:3157859-3158080 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 284-499 |
| Cow position: | chr20:6446928-6446707 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 284-499 |
| Cow position: | chr20:14505705-14505910 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 35 |
| Conread position: | 284-499 |
| Cow position: | chr20:28021188-28021406 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 284-506 |
| Cow position: | chr20:16788512-16788739 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 284-514 |
| Cow position: | chr20:13252971-13252746 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 165, 44 |
| Conread position: | 284-514 |
| Cow position: | chr20:36417436-36417202 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 88, 73 |
| Conread position: | 284-520 |
| Cow position: | chr20:4874788-4874539 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 87, 215 |
| Conread position: | 284-520 |
| Cow position: | chr20:13023126-13022890 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 165, 76 |
| Conread position: | 285-520 |
| Cow position: | chr20:39199990-39199751 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 95, 234 |
| Conread position: | 286-506 |
| Cow position: | chr20:7934042-7934261 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 286-519 |
| Cow position: | chr20:30703639-30703867 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 163, 87 |
| Conread position: | 286-520 |
| Cow position: | chr20:11749953-11749729 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 111, 16 |
| Conread position: | 287-487 |
| Cow position: | chr20:8213062-8212862 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 107, 118 |
| Conread position: | 287-497 |
| Cow position: | chr20:26724950-26724744 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 86, 67 |
| Conread position: | 292-516 |
| Cow position: | chr20:32347958-32348179 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 9, 82 |
| Conread position: | 293-481 |
| Cow position: | chr20:10575716-10575525 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 295-499 |
| Cow position: | chr20:15536337-15536136 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 295-506 |
| Cow position: | chr20:6869771-6869982 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 67, 91 |
| Conread position: | 295-506 |
| Cow position: | chr20:29587662-29587873 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-499 |
| Cow position: | chr20:8982809-8982601 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 66, 145 |
| Conread position: | 303-517 |
| Cow position: | chr20:9036171-9035954 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 304-440 |
| Cow position: | chr20:14704079-14703940 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 304-502 |
| Cow position: | chr20:8038722-8038524 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 305-516 |
| Cow position: | chr20:31248134-31248346 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 311-506 |
| Cow position: | chr20:14403782-14403978 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 54, 165 |
| Conread position: | 315-506 |
| Cow position: | chr20:7213097-7212904 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 134, 57 |
| Conread position: | 317-498 |
| Cow position: | chr20:4969669-4969494 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 95 |
| Conread position: | 328-499 |
| Cow position: | chr20:19865173-19865000 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 330-453 |
| Cow position: | chr20:33661101-33661225 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 334-520 |
| Cow position: | chr20:27582258-27582079 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 42 |
| Conread position: | 335-519 |
| Cow position: | chr20:3501310-3501131 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 102 |
| Conread position: | 337-508 |
| Cow position: | chr20:8099534-8099707 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 351-518 |
| Cow position: | chr20:868078-867909 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 355-500 |
| Cow position: | chr20:9079205-9079058 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 362-516 |
| Cow position: | chr20:26473998-26474151 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 140 |
Show alignments to all cow chromosomes.