Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 252-429 |
| Cow position: | chr21:2014147-2014328 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 284-437 |
| Cow position: | chr21:12560323-12560167 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 284-478 |
| Cow position: | chr21:37341742-37341549 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 74, 121 |
| Conread position: | 284-482 |
| Cow position: | chr21:18769325-18769132 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 166, 18 |
| Conread position: | 284-497 |
| Cow position: | chr21:8719219-8719005 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 113, 88 |
| Conread position: | 284-506 |
| Cow position: | chr21:3649076-3648865 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 165, 9 |
| Conread position: | 284-519 |
| Cow position: | chr21:6400342-6400101 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 176 |
| Conread position: | 284-519 |
| Cow position: | chr21:41728768-41728521 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 285-499 |
| Cow position: | chr21:3808438-3808655 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 150, 23 |
| Conread position: | 286-429 |
| Cow position: | chr21:43599676-43599816 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 286-433 |
| Cow position: | chr21:46327576-46327735 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 286-472 |
| Cow position: | chr21:31919702-31919888 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 130 |
| Conread position: | 286-473 |
| Cow position: | chr21:41430144-41430336 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 286-493 |
| Cow position: | chr21:20575351-20575150 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 163, 39 |
| Conread position: | 286-499 |
| Cow position: | chr21:26057976-26057758 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 286-499 |
| Cow position: | chr21:41458338-41458120 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 286-510 |
| Cow position: | chr21:22944856-22945079 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 163, 119 |
| Conread position: | 286-511 |
| Cow position: | chr21:10110249-10110474 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 288-506 |
| Cow position: | chr21:33308842-33309049 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 288-508 |
| Cow position: | chr21:31479220-31479434 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 80, 143 |
| Conread position: | 290-502 |
| Cow position: | chr21:4775278-4775487 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 83, 53 |
| Conread position: | 292-514 |
| Cow position: | chr21:21180518-21180733 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 181, 58 |
| Conread position: | 293-499 |
| Cow position: | chr21:40526676-40526465 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 294-470 |
| Cow position: | chr21:19435807-19435632 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 295-444 |
| Cow position: | chr21:40188301-40188151 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 142 |
| Conread position: | 295-497 |
| Cow position: | chr21:5878817-5878612 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 178 |
| Conread position: | 297-502 |
| Cow position: | chr21:9202916-9203120 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 73, 5 |
| Conread position: | 299-516 |
| Cow position: | chr21:47868516-47868736 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 302-519 |
| Cow position: | chr21:48616390-48616610 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 304-492 |
| Cow position: | chr21:7646486-7646298 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 305-499 |
| Cow position: | chr21:5486987-5487177 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 43 |
| Conread position: | 306-498 |
| Cow position: | chr21:30644835-30644646 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 143, 67 |
| Conread position: | 308-482 |
| Cow position: | chr21:5974989-5975163 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 61, 110 |
| Conread position: | 311-497 |
| Cow position: | chr21:18512329-18512519 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 315-439 |
| Cow position: | chr21:49646075-49645951 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 65 |
| Conread position: | 317-506 |
| Cow position: | chr21:38678204-38678390 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 136, 37 |
| Conread position: | 320-520 |
| Cow position: | chr21:6711839-6711637 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 113 |
| Conread position: | 321-519 |
| Cow position: | chr21:31126752-31126952 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 97, 78 |
| Conread position: | 325-487 |
| Cow position: | chr21:13160218-13160381 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 335-517 |
| Cow position: | chr21:4419270-4419090 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 344-520 |
| Cow position: | chr21:29252762-29252586 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 361-516 |
| Cow position: | chr21:44654782-44654628 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 363-497 |
| Cow position: | chr21:17520329-17520200 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 39 |
Show alignments to all cow chromosomes.