Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 270-475 |
| Cow position: | chr23:28831613-28831825 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 283-497 |
| Cow position: | chr23:1161010-1160784 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 283-520 |
| Cow position: | chr23:19913733-19913497 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 284-426 |
| Cow position: | chr23:28044834-28044971 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 284-426 |
| Cow position: | chr23:28197861-28197998 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 284-426 |
| Cow position: | chr23:28846853-28846993 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 284-467 |
| Cow position: | chr23:39899446-39899630 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 120 |
| Conread position: | 284-474 |
| Cow position: | chr23:15289835-15290021 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 165, 12 |
| Conread position: | 284-477 |
| Cow position: | chr23:12227383-12227196 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 166, 91 |
| Conread position: | 284-486 |
| Cow position: | chr23:35270578-35270777 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 165, 94 |
| Conread position: | 284-498 |
| Cow position: | chr23:36217436-36217219 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 284-506 |
| Cow position: | chr23:35383967-35383732 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 284-518 |
| Cow position: | chr23:9392614-9392387 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 89, 71 |
| Conread position: | 285-508 |
| Cow position: | chr23:29699082-29698872 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 286-498 |
| Cow position: | chr23:25360197-25360417 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 286-505 |
| Cow position: | chr23:777906-777685 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 286-517 |
| Cow position: | chr23:37639467-37639239 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 286-520 |
| Cow position: | chr23:25566240-25566464 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 164, 125 |
| Conread position: | 288-499 |
| Cow position: | chr23:27542438-27542651 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 10 |
| Conread position: | 289-516 |
| Cow position: | chr23:31026218-31025993 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 13 |
| Conread position: | 293-507 |
| Cow position: | chr23:7373457-7373671 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 9 |
| Conread position: | 295-493 |
| Cow position: | chr23:22582948-22583142 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 33 |
| Conread position: | 296-486 |
| Cow position: | chr23:40539025-40538839 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 63 |
| Conread position: | 296-499 |
| Cow position: | chr23:4602236-4602031 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 80, 121 |
| Conread position: | 304-447 |
| Cow position: | chr23:26982325-26982468 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-447 |
| Cow position: | chr23:39758723-39758583 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 304-469 |
| Cow position: | chr23:34773716-34773560 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 145, 74 |
| Conread position: | 307-514 |
| Cow position: | chr23:40920649-40920857 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 55, 76 |
| Conread position: | 308-482 |
| Cow position: | chr23:28067491-28067327 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 308-482 |
| Cow position: | chr23:28384313-28384481 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 308-504 |
| Cow position: | chr23:28010658-28010473 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 309-516 |
| Cow position: | chr23:19643166-19643375 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 62, 102 |
| Conread position: | 310-516 |
| Cow position: | chr23:12004337-12004537 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 317-498 |
| Cow position: | chr23:18154616-18154798 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 320-430 |
| Cow position: | chr23:1529899-1529788 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 321-493 |
| Cow position: | chr23:13518685-13518509 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 330-502 |
| Cow position: | chr23:15058740-15058569 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 330-505 |
| Cow position: | chr23:19954219-19954041 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 159 |
| Conread position: | 330-506 |
| Cow position: | chr23:13249921-13249748 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 337-519 |
| Cow position: | chr23:11093283-11093471 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 338-487 |
| Cow position: | chr23:28093260-28093116 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 338-495 |
| Cow position: | chr23:28174428-28174276 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 393-516 |
| Cow position: | chr23:35487253-35487374 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 21 |
Show alignments to all cow chromosomes.