Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 284-448 |
| Cow position: | chr28:24330415-24330253 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 284-473 |
| Cow position: | chr28:4375130-4374941 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 284-479 |
| Cow position: | chr28:10602941-10603135 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 117, 96 |
| Conread position: | 284-481 |
| Cow position: | chr28:6871310-6871503 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 120, 72 |
| Conread position: | 284-482 |
| Cow position: | chr28:31339327-31339124 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 284-499 |
| Cow position: | chr28:11690167-11689958 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 284-499 |
| Cow position: | chr28:16613547-16613761 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 122 |
| Conread position: | 284-506 |
| Cow position: | chr28:22242239-22242023 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 284-515 |
| Cow position: | chr28:978504-978271 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 85, 216 |
| Conread position: | 284-516 |
| Cow position: | chr28:12226188-12225953 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 88, 184 |
| Conread position: | 285-448 |
| Cow position: | chr28:10163245-10163408 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 285-499 |
| Cow position: | chr28:32163446-32163228 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 285-506 |
| Cow position: | chr28:21941724-21941500 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 77, 187 |
| Conread position: | 286-412 |
| Cow position: | chr28:14555564-14555696 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 286-478 |
| Cow position: | chr28:10574235-10574048 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 155, 84 |
| Conread position: | 286-498 |
| Cow position: | chr28:7595325-7595114 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 286-506 |
| Cow position: | chr28:22202186-22202407 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 61 |
| Conread position: | 286-507 |
| Cow position: | chr28:25498491-25498282 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 48 |
| Conread position: | 287-487 |
| Cow position: | chr28:20252301-20252499 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 88, 43 |
| Conread position: | 287-520 |
| Cow position: | chr28:10971446-10971683 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 288-498 |
| Cow position: | chr28:25307023-25307229 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 288-511 |
| Cow position: | chr28:2577342-2577565 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 288-519 |
| Cow position: | chr28:5158389-5158622 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 295-507 |
| Cow position: | chr28:27111253-27111469 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 296-443 |
| Cow position: | chr28:28042221-28042079 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 296-482 |
| Cow position: | chr28:4404044-4404231 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 296-516 |
| Cow position: | chr28:3803229-3803443 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 96 |
| Conread position: | 297-520 |
| Cow position: | chr28:2642001-2642222 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 298-518 |
| Cow position: | chr28:1885344-1885564 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 302-427 |
| Cow position: | chr28:17333740-17333867 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 305-498 |
| Cow position: | chr28:4110914-4111104 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 308-498 |
| Cow position: | chr28:21118301-21118112 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 312-499 |
| Cow position: | chr28:25315261-25315439 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 126 |
| Conread position: | 313-496 |
| Cow position: | chr28:3818280-3818090 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 315-520 |
| Cow position: | chr28:31415064-31414860 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 134, 69 |
| Conread position: | 330-516 |
| Cow position: | chr28:1779736-1779926 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 331-499 |
| Cow position: | chr28:15993650-15993817 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 337-466 |
| Cow position: | chr28:4047621-4047752 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.