Cow genome map
| Conread name: | rret07_p14.y1 |
| Conread position: | 284-417 |
| Cow position: | chr8:4347971-4347835 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 284-443 |
| Cow position: | chr8:1386333-1386490 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 284-465 |
| Cow position: | chr8:19498099-19497906 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 284-472 |
| Cow position: | chr8:24890296-24890478 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 166, 49 |
| Conread position: | 284-473 |
| Cow position: | chr8:58387435-58387260 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 284-475 |
| Cow position: | chr8:5185883-5186071 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 284-487 |
| Cow position: | chr8:11058216-11058411 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 167, 25 |
| Conread position: | 284-487 |
| Cow position: | chr8:31288903-31288703 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 47 |
| Conread position: | 284-498 |
| Cow position: | chr8:5503709-5503923 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 96, 159 |
| Conread position: | 284-499 |
| Cow position: | chr8:15647657-15647883 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 205 |
| Conread position: | 284-499 |
| Cow position: | chr8:37381495-37381713 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 137 |
| Conread position: | 284-500 |
| Cow position: | chr8:6585994-6586212 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 157, 53 |
| Conread position: | 284-500 |
| Cow position: | chr8:43974666-43974455 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 166, 89 |
| Conread position: | 284-502 |
| Cow position: | chr8:43399030-43398814 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 161, 90 |
| Conread position: | 284-506 |
| Cow position: | chr8:39097760-39097538 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 63 |
| Conread position: | 284-506 |
| Cow position: | chr8:53106490-53106288 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 284-511 |
| Cow position: | chr8:49392975-49392753 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 77, 98 |
| Conread position: | 284-513 |
| Cow position: | chr8:58424902-58425117 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 284-516 |
| Cow position: | chr8:36107365-36107598 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 12, 111 |
| Conread position: | 284-520 |
| Cow position: | chr8:16060088-16059859 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 11 |
| Conread position: | 285-498 |
| Cow position: | chr8:26928883-26928668 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 286-435 |
| Cow position: | chr8:21130204-21130356 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 286-479 |
| Cow position: | chr8:41146902-41147092 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 167, 16 |
| Conread position: | 286-506 |
| Cow position: | chr8:21945787-21946008 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 286-506 |
| Cow position: | chr8:24747069-24747296 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 50 |
| Conread position: | 286-506 |
| Cow position: | chr8:51919855-51919635 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 73, 188 |
| Conread position: | 286-517 |
| Cow position: | chr8:18908155-18908379 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 287-464 |
| Cow position: | chr8:48084761-48084937 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 159, 83 |
| Conread position: | 287-480 |
| Cow position: | chr8:9809497-9809696 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 110 |
| Conread position: | 287-488 |
| Cow position: | chr8:26397778-26397579 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 162, 60 |
| Conread position: | 287-497 |
| Cow position: | chr8:26158488-26158696 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 287-520 |
| Cow position: | chr8:51443201-51442973 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 162, 86 |
| Conread position: | 288-520 |
| Cow position: | chr8:59727947-59728175 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 161, 72 |
| Conread position: | 295-499 |
| Cow position: | chr8:51568824-51568617 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 133 |
| Conread position: | 295-502 |
| Cow position: | chr8:17128807-17128607 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 296-506 |
| Cow position: | chr8:26195074-26194870 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 296-506 |
| Cow position: | chr8:51588241-51588037 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 304-465 |
| Cow position: | chr8:45702094-45701932 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 150 |
| Conread position: | 305-499 |
| Cow position: | chr8:30473822-30473634 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 65, 142 |
| Conread position: | 308-477 |
| Cow position: | chr8:18984516-18984344 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 308-499 |
| Cow position: | chr8:1506908-1506715 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 308-506 |
| Cow position: | chr8:31495191-31495394 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 309-498 |
| Cow position: | chr8:53887052-53887241 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 140, 54 |
| Conread position: | 310-499 |
| Cow position: | chr8:57354230-57354424 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 311-499 |
| Cow position: | chr8:61465681-61465862 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 139, 25 |
| Conread position: | 314-518 |
| Cow position: | chr8:24766761-24766559 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 127, 59 |
| Conread position: | 320-506 |
| Cow position: | chr8:38234046-38233852 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 187 |
| Conread position: | 321-498 |
| Cow position: | chr8:44127870-44127688 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 326-506 |
| Cow position: | chr8:61266476-61266657 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 96 |
| Conread position: | 327-516 |
| Cow position: | chr8:40697590-40697396 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 332-505 |
| Cow position: | chr8:29559637-29559813 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 335-487 |
| Cow position: | chr8:28383050-28383197 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 338-499 |
| Cow position: | chr8:42399291-42399125 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 353-507 |
| Cow position: | chr8:10862725-10862574 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 366-517 |
| Cow position: | chr8:24351585-24351434 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 19 |
Show alignments to all cow chromosomes.