Cow genome map
Conread name: | rret07_p14.y1 |
Conread position: | 281-505 |
Cow position: | chrX:6570175-6570390 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 171 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 90, 76 |
Conread position: | 282-430 |
Cow position: | chrX:42974936-42974795 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 16, 6 |
Conread position: | 283-511 |
Cow position: | chrX:17200778-17201007 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 191 |
Conread position: | 284-411 |
Cow position: | chrX:46907003-46906878 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 77, 26 |
Conread position: | 284-451 |
Cow position: | chrX:25163867-25164033 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 95, 77 |
Conread position: | 284-471 |
Cow position: | chrX:16933534-16933722 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 136 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 77, 22 |
Conread position: | 284-476 |
Cow position: | chrX:17147991-17147800 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 84, 53 |
Conread position: | 284-476 |
Cow position: | chrX:38693623-38693814 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 149 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 86, 17 |
Conread position: | 284-477 |
Cow position: | chrX:6380884-6381078 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 148 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 78, 18 |
Conread position: | 284-483 |
Cow position: | chrX:4794118-4793921 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 155 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 87, 10 |
Conread position: | 284-487 |
Cow position: | chrX:263749-263543 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 167 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 284-487 |
Cow position: | chrX:21989892-21990085 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 165, 14 |
Conread position: | 284-498 |
Cow position: | chrX:19210328-19210123 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 88, 18 |
Conread position: | 284-499 |
Cow position: | chrX:20128811-20128610 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 157 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 164, 87 |
Conread position: | 284-499 |
Cow position: | chrX:25848990-25849202 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 162 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 108, 9 |
Conread position: | 284-499 |
Cow position: | chrX:42218931-42219145 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 155 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 110, 12 |
Conread position: | 284-502 |
Cow position: | chrX:46372684-46372460 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 79, 158 |
Conread position: | 284-506 |
Cow position: | chrX:21262599-21262386 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 29, 78 |
Conread position: | 284-506 |
Cow position: | chrX:25707760-25707544 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 18 |
Conread position: | 284-506 |
Cow position: | chrX:34865782-34865556 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 284-511 |
Cow position: | chrX:32049348-32049565 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 166 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 284-513 |
Cow position: | chrX:6277377-6277168 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 164 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 284-514 |
Cow position: | chrX:4425039-4425270 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 179 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 89, 183 |
Conread position: | 284-514 |
Cow position: | chrX:17265027-17264803 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 84, 22 |
Conread position: | 284-515 |
Cow position: | chrX:18408146-18408362 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 167 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 165, 82 |
Conread position: | 284-520 |
Cow position: | chrX:10462696-10462934 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 104 |
Conread position: | 286-487 |
Cow position: | chrX:40142155-40141953 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 159 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 87, 122 |
Conread position: | 286-520 |
Cow position: | chrX:20715853-20715619 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 171 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 83, 50 |
Conread position: | 295-473 |
Cow position: | chrX:34134254-34134430 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 135 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 154, 41 |
Conread position: | 295-487 |
Cow position: | chrX:35695339-35695533 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 146 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 75, 185 |
Conread position: | 295-496 |
Cow position: | chrX:47314526-47314730 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 299-507 |
Cow position: | chrX:19976920-19976706 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 162 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 62, 33 |
Conread position: | 304-492 |
Cow position: | chrX:36044323-36044139 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 152 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 57, 82 |
Conread position: | 304-499 |
Cow position: | chrX:19093952-19093757 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 158 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 71, 147 |
Conread position: | 306-498 |
Cow position: | chrX:27024237-27024419 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 146 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 315-505 |
Cow position: | chrX:4629580-4629391 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 144 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 44, 64 |
Conread position: | 318-520 |
Cow position: | chrX:37873271-37873467 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 76, 56 |
Conread position: | 320-499 |
Cow position: | chrX:40342634-40342815 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 144 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 51, 135 |
Conread position: | 324-506 |
Cow position: | chrX:40334000-40333821 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 139 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 50, 10 |
Conread position: | 328-499 |
Cow position: | chrX:20562494-20562671 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 34, 153 |
Conread position: | 332-501 |
Cow position: | chrX:21206029-21205861 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 39, 125 |
Conread position: | 332-516 |
Cow position: | chrX:25824173-25823988 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 134 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 114, 9 |
Conread position: | 334-507 |
Cow position: | chrX:32736189-32736016 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 16, 47 |
Conread position: | 337-483 |
Cow position: | chrX:13909807-13909952 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 45, 115 |
Conread position: | 337-516 |
Cow position: | chrX:503121-502940 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 134 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 27, 100 |
Conread position: | 341-508 |
Cow position: | chrX:4162973-4162811 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 108, 31 |
Conread position: | 343-516 |
Cow position: | chrX:30876165-30875981 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 347-506 |
Cow position: | chrX:42529622-42529457 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 348-515 |
Cow position: | chrX:45070474-45070310 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 20, 39 |
Conread position: | 371-501 |
Cow position: | chrX:36029089-36029220 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 380-499 |
Cow position: | chrX:9166426-9166306 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 93 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.