Cow genome map

Conread name: rret07_p14.y1

Conread position: 281-505
Cow position: chrX:6570175-6570390 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 90, 76

Conread position: 282-430
Cow position: chrX:42974936-42974795 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 6

Conread position: 283-511
Cow position: chrX:17200778-17201007 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 191

Conread position: 284-411
Cow position: chrX:46907003-46906878 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 77, 26

Conread position: 284-451
Cow position: chrX:25163867-25164033 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 95, 77

Conread position: 284-471
Cow position: chrX:16933534-16933722 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 22

Conread position: 284-476
Cow position: chrX:17147991-17147800 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 84, 53

Conread position: 284-476
Cow position: chrX:38693623-38693814 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 17

Conread position: 284-477
Cow position: chrX:6380884-6381078 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 78, 18

Conread position: 284-483
Cow position: chrX:4794118-4793921 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 87, 10

Conread position: 284-487
Cow position: chrX:263749-263543 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 284-487
Cow position: chrX:21989892-21990085 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 165, 14

Conread position: 284-498
Cow position: chrX:19210328-19210123 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 18

Conread position: 284-499
Cow position: chrX:20128811-20128610 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 164, 87

Conread position: 284-499
Cow position: chrX:25848990-25849202 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 108, 9

Conread position: 284-499
Cow position: chrX:42218931-42219145 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 110, 12

Conread position: 284-502
Cow position: chrX:46372684-46372460 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 158

Conread position: 284-506
Cow position: chrX:21262599-21262386 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 29, 78

Conread position: 284-506
Cow position: chrX:25707760-25707544 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 18

Conread position: 284-506
Cow position: chrX:34865782-34865556 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 89, 0

Conread position: 284-511
Cow position: chrX:32049348-32049565 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 284-513
Cow position: chrX:6277377-6277168 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 284-514
Cow position: chrX:4425039-4425270 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 89, 183

Conread position: 284-514
Cow position: chrX:17265027-17264803 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 22

Conread position: 284-515
Cow position: chrX:18408146-18408362 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 165, 82

Conread position: 284-520
Cow position: chrX:10462696-10462934 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 104

Conread position: 286-487
Cow position: chrX:40142155-40141953 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 87, 122

Conread position: 286-520
Cow position: chrX:20715853-20715619 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 50

Conread position: 295-473
Cow position: chrX:34134254-34134430 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 154, 41

Conread position: 295-487
Cow position: chrX:35695339-35695533 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 185

Conread position: 295-496
Cow position: chrX:47314526-47314730 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 299-507
Cow position: chrX:19976920-19976706 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 62, 33

Conread position: 304-492
Cow position: chrX:36044323-36044139 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 82

Conread position: 304-499
Cow position: chrX:19093952-19093757 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 147

Conread position: 306-498
Cow position: chrX:27024237-27024419 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 315-505
Cow position: chrX:4629580-4629391 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 64

Conread position: 318-520
Cow position: chrX:37873271-37873467 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 76, 56

Conread position: 320-499
Cow position: chrX:40342634-40342815 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 135

Conread position: 324-506
Cow position: chrX:40334000-40333821 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 10

Conread position: 328-499
Cow position: chrX:20562494-20562671 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 153

Conread position: 332-501
Cow position: chrX:21206029-21205861 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 125

Conread position: 332-516
Cow position: chrX:25824173-25823988 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 114, 9

Conread position: 334-507
Cow position: chrX:32736189-32736016 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 47

Conread position: 337-483
Cow position: chrX:13909807-13909952 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 115

Conread position: 337-516
Cow position: chrX:503121-502940 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 100

Conread position: 341-508
Cow position: chrX:4162973-4162811 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 108, 31

Conread position: 343-516
Cow position: chrX:30876165-30875981 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 347-506
Cow position: chrX:42529622-42529457 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 348-515
Cow position: chrX:45070474-45070310 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 39

Conread position: 371-501
Cow position: chrX:36029089-36029220 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 380-499
Cow position: chrX:9166426-9166306 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.