Cow genome map

Conread name: rret14_f13.y1

Conread position: 1-140
Cow position: chr24:26588365-26588231 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-140
Cow position: chr24:38693730-38693869 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 13

Conread position: 1-146
Cow position: chr24:22221527-22221382 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-146
Cow position: chr24:24091187-24091335 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-147
Cow position: chr24:25947712-25947858 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chr24:250388-250539 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr24:28788005-28787850 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 51

Conread position: 1-158
Cow position: chr24:18702547-18702390 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 150, 74

Conread position: 1-158
Cow position: chr24:23046748-23046905 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-158
Cow position: chr24:25142764-25142602 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-161
Cow position: chr24:27271076-27270916 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-162
Cow position: chr24:18810981-18810820 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr24:162153-161991 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position: chr24:12121046-12120883 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chr24:16641060-16640892 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 0

Conread position: 1-168
Cow position: chr24:18730494-18730327 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chr24:44896188-44896021 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-172
Cow position: chr24:5632269-5632442 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 128

Conread position: 1-172
Cow position: chr24:33238107-33238286 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-174
Cow position: chr24:6008023-6008192 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 1-174
Cow position: chr24:18874673-18874844 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 1-175
Cow position: chr24:34301889-34302060 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 130, 0

Conread position: 1-181
Cow position: chr24:6740028-6740198 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-181
Cow position: chr24:11836254-11836434 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-182
Cow position: chr24:36286715-36286538 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 47

Conread position: 1-184
Cow position: chr24:32230357-32230541 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 31

Conread position: 1-188
Cow position: chr24:17308994-17309174 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 1-188
Cow position: chr24:25201434-25201246 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 1-193
Cow position: chr24:35310873-35310679 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 162, 67

Conread position: 1-194
Cow position: chr24:22194561-22194371 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 141, 45

Conread position: 1-195
Cow position: chr24:34465346-34465550 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 1-199
Cow position: chr24:18750857-18750656 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 158, 0

Conread position: 1-199
Cow position: chr24:44762270-44762468 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-200
Cow position: chr24:6742372-6742172 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 1-200
Cow position: chr24:15353591-15353393 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-200
Cow position: chr24:42984542-42984342 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 1-201
Cow position: chr24:24810673-24810468 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 1-202
Cow position: chr24:11036691-11036886 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 1-206
Cow position: chr24:41916404-41916198 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 159, 42

Conread position: 1-210
Cow position: chr24:5360858-5360661 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 45

Conread position: 1-218
Cow position: chr24:24490878-24491084 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 1-218
Cow position: chr24:43028181-43028392 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 1-219
Cow position: chr24:8676972-8676755 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 1-220
Cow position: chr24:11028540-11028753 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 73, 0

Conread position: 1-238
Cow position: chr24:24532318-24532093 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 50

Conread position: 1-240
Cow position: chr24:19637733-19637495 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 104, 42

Conread position: 1-246
Cow position: chr24:19624012-19623765 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 165

Conread position: 1-248
Cow position: chr24:13948269-13948027 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 14

Conread position: 1-248
Cow position: chr24:15288974-15288726 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 202, 57

Conread position: 1-249
Cow position: chr24:9222233-9222480 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 125

Conread position: 1-249
Cow position: chr24:28303215-28303462 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 93

Conread position: 1-249
Cow position: chr24:37823671-37823433 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 1-251
Cow position: chr24:27958320-27958573 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 159, 195

Conread position: 1-252
Cow position: chr24:22511708-22511458 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 219

Conread position: 1-257
Cow position: chr24:10031721-10031484 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 1-258
Cow position: chr24:230427-230172 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 146, 37

Conread position: 1-260
Cow position: chr24:21606529-21606779 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 236, 123

Conread position: 1-262
Cow position: chr24:30236019-30235759 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 189, 62

Conread position: 1-264
Cow position: chr24:42862772-42862514 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 1-265
Cow position: chr24:14550937-14550682 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 25

Conread position: 1-265
Cow position: chr24:35365560-35365810 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 1-271
Cow position: chr24:37974836-37975098 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 49

Conread position: 1-274
Cow position: chr24:37267812-37267541 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 210, 201

Conread position: 1-279
Cow position: chr24:3165967-3165691 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 234, 58

Conread position: 1-282
Cow position: chr24:17943030-17943302 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 1-285
Cow position: chr24:20594695-20594407 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 184, 70

Conread position: 1-286
Cow position: chr24:25885001-25885293 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 107

Conread position: 1-286
Cow position: chr24:35675678-35675413 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 1-287
Cow position: chr24:34272966-34272679 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 196

Conread position: 1-290
Cow position: chr24:5397053-5397326 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 1-291
Cow position: chr24:27713263-27713541 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 1-292
Cow position: chr24:19179289-19179582 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 210, 99

Conread position: 1-293
Cow position: chr24:17407538-17407255 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 200, 66

Conread position: 1-295
Cow position: chr24:184462-184749 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 42

Conread position: 1-295
Cow position: chr24:17751961-17752253 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 80

Conread position: 1-295
Cow position: chr24:33621331-33621625 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 188, 249

Conread position: 1-295
Cow position: chr24:39849745-39850025 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-298
Cow position: chr24:40592860-40592571 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 42

Conread position: 1-299
Cow position: chr24:23863479-23863779 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 192, 0

Conread position: 1-305
Cow position: chr24:36711343-36711050 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 1-313
Cow position: chr24:15693169-15692869 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 57, 159

Conread position: 1-314
Cow position: chr24:22689426-22689737 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 154, 195

Conread position: 1-315
Cow position: chr24:10671544-10671237 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 17

Conread position: 1-315
Cow position: chr24:22225338-22225025 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 20

Conread position: 1-315
Cow position: chr24:27219941-27220247 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 67

Conread position: 1-315
Cow position: chr24:27919273-27918948 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 201

Conread position: 1-316
Cow position: chr24:3494028-3493735 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 42

Conread position: 1-316
Cow position: chr24:6102974-6102667 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 1-316
Cow position: chr24:39290194-39289895 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 210, 30

Conread position: 1-317
Cow position: chr24:7914156-7913844 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 197, 0

Conread position: 1-317
Cow position: chr24:16510119-16509812 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 47

Conread position: 1-317
Cow position: chr24:18344213-18343891 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 216, 304

Conread position: 1-317
Cow position: chr24:19800986-19800688 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-317
Cow position: chr24:25092671-25092372 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 135, 0

Conread position: 1-317
Cow position: chr24:30313882-30314190 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 82, 48

Conread position: 1-317
Cow position: chr24:33944553-33944246 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 188

Conread position: 1-317
Cow position: chr24:38347823-38347524 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 1-317
Cow position: chr24:38815121-38814810 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 70, 205

Conread position: 1-317
Cow position: chr24:41423743-41423451 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 157, 42

Conread position: 1-317
Cow position: chr24:44040864-44041171 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 46

Conread position: 1-318
Cow position: chr24:16645171-16645488 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 54

Conread position: 1-318
Cow position: chr24:16995025-16994727 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 311, 54

Conread position: 1-318
Cow position: chr24:18484846-18485156 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 79

Conread position: 1-318
Cow position: chr24:19187079-19186802 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 1-321
Cow position: chr24:7917232-7917527 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 84, 0

Conread position: 1-321
Cow position: chr24:10499365-10499052 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 102

Conread position: 1-321
Cow position: chr24:19000190-18999885 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 82

Conread position: 1-321
Cow position: chr24:20801198-20801508 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 287, 67

Conread position: 1-321
Cow position: chr24:27040197-27039880 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 135

Conread position: 1-321
Cow position: chr24:28063097-28062790 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 49

Conread position: 1-321
Cow position: chr24:29595653-29595973 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 207

Conread position: 1-321
Cow position: chr24:29782311-29782002 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 70

Conread position: 1-321
Cow position: chr24:31812332-31812026 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 84, 48

Conread position: 1-321
Cow position: chr24:33098325-33098654 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 198, 57

Conread position: 1-321
Cow position: chr24:44987225-44987545 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 256

Conread position: 1-325
Cow position: chr24:41001413-41001092 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 162, 130

Conread position: 1-326
Cow position: chr24:28722024-28721724 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-326
Cow position: chr24:33372693-33372387 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 263, 44

Conread position: 1-328
Cow position: chr24:28990709-28990393 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 317, 71

Conread position: 1-334
Cow position: chr24:30229621-30229296 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 42

Conread position: 1-334
Cow position: chr24:39143759-39143432 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 331, 103

Conread position: 1-335
Cow position: chr24:17294048-17294369 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 331, 132

Conread position: 1-335
Cow position: chr24:27906585-27906260 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 24

Conread position: 1-336
Cow position: chr24:22079610-22079284 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 123

Conread position: 1-336
Cow position: chr24:22647189-22647520 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 17

Conread position: 1-337
Cow position: chr24:7476203-7476532 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 331, 203

Conread position: 1-337
Cow position: chr24:13626433-13626103 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 69, 46

Conread position: 1-337
Cow position: chr24:21519577-21519258 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 109, 147

Conread position: 1-337
Cow position: chr24:32609796-32609462 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 216, 78

Conread position: 1-339
Cow position: chr24:11045411-11045745 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 216
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 200, 129

Conread position: 2-117
Cow position: chr24:124708-124593 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-131
Cow position: chr24:38427964-38428093 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-158
Cow position: chr24:11735924-11736079 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 150, 65

Conread position: 2-158
Cow position: chr24:18405133-18405288 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 2-160
Cow position: chr24:36554555-36554707 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 2-170
Cow position: chr24:27553246-27553076 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 18

Conread position: 2-172
Cow position: chr24:2261816-2261646 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-180
Cow position: chr24:17060072-17060243 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 163, 34

Conread position: 2-180
Cow position: chr24:27066376-27066201 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 2-181
Cow position: chr24:5152672-5152493 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 2-187
Cow position: chr24:32890901-32891080 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 2-188
Cow position: chr24:13888851-13888667 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 157, 0

Conread position: 2-201
Cow position: chr24:14989348-14989150 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 2-215
Cow position: chr24:23575013-23575223 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 200, 0

Conread position: 2-221
Cow position: chr24:21834817-21835029 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 195, 45

Conread position: 2-235
Cow position: chr24:14551606-14551387 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 45

Conread position: 2-241
Cow position: chr24:2992734-2992965 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 0

Conread position: 2-249
Cow position: chr24:39910885-39911132 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 87

Conread position: 2-257
Cow position: chr24:28342507-28342247 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 2-280
Cow position: chr24:39523304-39523573 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 2-289
Cow position: chr24:28234187-28233914 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 8, 35

Conread position: 2-289
Cow position: chr24:29587146-29586860 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 21

Conread position: 2-293
Cow position: chr24:38478249-38478521 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 180, 41

Conread position: 2-295
Cow position: chr24:38006566-38006846 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 55, 135

Conread position: 2-315
Cow position: chr24:11112435-11112744 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 183, 41

Conread position: 2-315
Cow position: chr24:18281489-18281791 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 162, 97

Conread position: 2-315
Cow position: chr24:20943306-20943011 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 82, 60

Conread position: 2-316
Cow position: chr24:7777488-7777773 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 36

Conread position: 2-317
Cow position: chr24:19465769-19466088 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 77

Conread position: 2-317
Cow position: chr24:23442435-23442745 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 189, 103

Conread position: 2-321
Cow position: chr24:17860116-17860417 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 2-321
Cow position: chr24:20874826-20874518 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 2-321
Cow position: chr24:27267759-27267469 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 2-326
Cow position: chr24:17284837-17285161 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 162, 205

Conread position: 2-326
Cow position: chr24:30483798-30484118 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 41

Conread position: 2-328
Cow position: chr24:37038037-37037723 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 119, 51

Conread position: 2-333
Cow position: chr24:34396044-34396350 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 318, 9

Conread position: 2-336
Cow position: chr24:15861445-15861777 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 224

Conread position: 2-336
Cow position: chr24:23556191-23556503 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 113, 41

Conread position: 2-338
Cow position: chr24:32739117-32739457 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 38, 85

Conread position: 3-144
Cow position: chr24:43027076-43027220 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 3-153
Cow position: chr24:15557199-15557344 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-153
Cow position: chr24:22420108-22419958 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-158
Cow position: chr24:37252302-37252150 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 44

Conread position: 3-161
Cow position: chr24:20323353-20323512 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 3-164
Cow position: chr24:4635020-4635181 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-165
Cow position: chr24:44776029-44776191 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-167
Cow position: chr24:7113378-7113206 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 3-168
Cow position: chr24:40055364-40055528 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 3-173
Cow position: chr24:36485639-36485825 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 3-178
Cow position: chr24:43373207-43373037 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 3-183
Cow position: chr24:17689463-17689643 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 82

Conread position: 3-185
Cow position: chr24:22567251-22567069 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 120, 132

Conread position: 3-189
Cow position: chr24:18668728-18668540 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 129

Conread position: 3-195
Cow position: chr24:27448795-27448600 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 59

Conread position: 3-231
Cow position: chr24:13586846-13587065 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 54

Conread position: 3-241
Cow position: chr24:27284969-27284733 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 142

Conread position: 3-244
Cow position: chr24:20734190-20733930 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 79

Conread position: 3-249
Cow position: chr24:18755905-18755661 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 163, 204

Conread position: 3-252
Cow position: chr24:28600290-28600537 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 81, 38

Conread position: 3-268
Cow position: chr24:880766-880515 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 3-287
Cow position: chr24:2359040-2359309 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 39

Conread position: 3-287
Cow position: chr24:35632126-35631854 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 125, 40

Conread position: 3-291
Cow position: chr24:36008631-36008349 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 3-293
Cow position: chr24:35332873-35332582 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 163, 158

Conread position: 3-293
Cow position: chr24:40537187-40537471 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 161, 118

Conread position: 3-294
Cow position: chr24:20588318-20588037 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 207, 161

Conread position: 3-294
Cow position: chr24:27725860-27726155 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 12, 51

Conread position: 3-295
Cow position: chr24:5142086-5141803 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 3-295
Cow position: chr24:15057532-15057260 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 3-295
Cow position: chr24:17104424-17104713 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 3-296
Cow position: chr24:390245-389959 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 203, 40

Conread position: 3-297
Cow position: chr24:6131739-6132016 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 205, 46

Conread position: 3-301
Cow position: chr24:26880900-26880618 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 292, 133

Conread position: 3-315
Cow position: chr24:18741420-18741727 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 203

Conread position: 3-315
Cow position: chr24:26928796-26929101 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 201, 0

Conread position: 3-317
Cow position: chr24:28553424-28553705 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 0

Conread position: 3-318
Cow position: chr24:24457094-24457405 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 205

Conread position: 3-321
Cow position: chr24:352459-352767 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 3-321
Cow position: chr24:18356908-18357215 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 3-321
Cow position: chr24:19535108-19535414 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 3-321
Cow position: chr24:31159775-31159455 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 88

Conread position: 3-321
Cow position: chr24:41980515-41980831 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 243, 39

Conread position: 3-334
Cow position: chr24:20225892-20225565 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 143

Conread position: 3-336
Cow position: chr24:16089377-16089060 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 49, 73

Conread position: 3-336
Cow position: chr24:27096839-27096507 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 144

Conread position: 3-336
Cow position: chr24:37945501-37945812 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 141, 40

Conread position: 3-337
Cow position: chr24:34762041-34761717 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 82

Conread position: 4-163
Cow position: chr24:29677766-29677928 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 4-239
Cow position: chr24:6912214-6912453 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 12

Conread position: 4-239
Cow position: chr24:22156293-22156058 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 200

Conread position: 4-316
Cow position: chr24:28700192-28699900 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 39

Conread position: 4-321
Cow position: chr24:32204640-32204956 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 183

Conread position: 4-321
Cow position: chr24:35074226-35073930 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 5-158
Cow position: chr24:43499803-43499651 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 40

Conread position: 5-159
Cow position: chr24:41301521-41301672 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 5-172
Cow position: chr24:27810294-27810137 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 5-188
Cow position: chr24:22133310-22133134 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 5-197
Cow position: chr24:42726603-42726404 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 5-201
Cow position: chr24:28470522-28470730 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 5-208
Cow position: chr24:26001532-26001330 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 5-231
Cow position: chr24:27202228-27202013 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 5-252
Cow position: chr24:31816720-31816478 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 5-286
Cow position: chr24:29605885-29606175 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 27

Conread position: 5-289
Cow position: chr24:17311081-17311346 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 5-293
Cow position: chr24:32191201-32190930 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 190
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 5-294
Cow position: chr24:10242637-10242921 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 193, 0

Conread position: 5-295
Cow position: chr24:12200264-12200553 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 5-301
Cow position: chr24:27149527-27149248 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 286, 24

Conread position: 5-313
Cow position: chr24:19474519-19474821 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 158, 76

Conread position: 5-318
Cow position: chr24:27540411-27540707 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 220, 38

Conread position: 5-318
Cow position: chr24:35985590-35985882 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 5-338
Cow position: chr24:5632885-5633213 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 84

Conread position: 5-339
Cow position: chr24:28699733-28699403 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 95

Conread position: 6-162
Cow position: chr24:398960-399113 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 6-318
Cow position: chr24:31359460-31359167 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 6-322
Cow position: chr24:18159991-18160302 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 42

Conread position: 7-296
Cow position: chr24:37395066-37395351 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 54, 148

Conread position: 7-328
Cow position: chr24:6450650-6450328 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 144

Conread position: 7-328
Cow position: chr24:27630540-27630232 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 36

Conread position: 8-132
Cow position: chr24:43445873-43445995 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 8-281
Cow position: chr24:29561438-29561701 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 194, 34

Conread position: 8-321
Cow position: chr24:35576395-35576697 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 93

Conread position: 8-321
Cow position: chr24:40130278-40129960 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 202

Conread position: 10-164
Cow position: chr24:39960862-39961011 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 10-174
Cow position: chr24:31383250-31383097 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 10-184
Cow position: chr24:26848594-26848764 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 39

Conread position: 10-317
Cow position: chr24:42103503-42103211 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 71

Conread position: 11-158
Cow position: chr24:39218406-39218559 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 11-164
Cow position: chr24:42008157-42008009 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 11-168
Cow position: chr24:9300767-9300611 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 78

Conread position: 11-180
Cow position: chr24:32979034-32979197 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 11-201
Cow position: chr24:28355558-28355736 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 11-268
Cow position: chr24:41406040-41405783 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 202

Conread position: 11-270
Cow position: chr24:16895010-16895247 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 73, 36

Conread position: 11-293
Cow position: chr24:5651865-5652126 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 11-315
Cow position: chr24:32054790-32054503 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 71

Conread position: 11-317
Cow position: chr24:26554457-26554759 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 205, 192

Conread position: 11-317
Cow position: chr24:42344857-42345163 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 86, 90

Conread position: 12-317
Cow position: chr24:20249757-20250058 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 205, 190

Conread position: 12-336
Cow position: chr24:17832684-17832990 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 183, 46

Conread position: 12-352
Cow position: chr24:10300216-10299888 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 144

Conread position: 13-265
Cow position: chr24:3656228-3656477 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 189, 199

Conread position: 13-321
Cow position: chr24:11840321-11840016 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 35

Conread position: 19-321
Cow position: chr24:15347720-15347430 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 17

Conread position: 22-270
Cow position: chr24:31309522-31309279 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 47, 177

Conread position: 23-270
Cow position: chr24:2402246-2402484 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 24-295
Cow position: chr24:34742880-34742614 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 180

Conread position: 26-336
Cow position: chr24:12851834-12851543 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 106

Conread position: 29-182
Cow position: chr24:14786504-14786348 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 30-301
Cow position: chr24:2108123-2108395 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 164

Conread position: 37-165
Cow position: chr24:29014084-29013952 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 37-372
Cow position: chr24:5683393-5683065 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 96, 78

Conread position: 39-166
Cow position: chr24:22235579-22235452 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 39-241
Cow position: chr24:40389717-40389520 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 35

Conread position: 39-294
Cow position: chr24:18313821-18314090 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 106, 154

Conread position: 39-295
Cow position: chr24:8006416-8006170 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 39-295
Cow position: chr24:15373517-15373268 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 164, 0

Conread position: 39-318
Cow position: chr24:32071073-32070807 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 104

Conread position: 39-321
Cow position: chr24:18970395-18970670 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 166

Conread position: 39-321
Cow position: chr24:27290981-27290706 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 39-321
Cow position: chr24:40850263-40849996 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 250, 71

Conread position: 39-322
Cow position: chr24:18390189-18390452 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 107

Conread position: 41-208
Cow position: chr24:20969557-20969720 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 158, 17

Conread position: 43-347
Cow position: chr24:18017335-18017039 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 160, 0

Conread position: 44-296
Cow position: chr24:28289147-28289391 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 40, 30

Conread position: 44-321
Cow position: chr24:33465515-33465770 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 45-273
Cow position: chr24:16118464-16118249 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 45-291
Cow position: chr24:28690790-28690551 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 0

Conread position: 45-315
Cow position: chr24:29171067-29170809 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 0

Conread position: 45-318
Cow position: chr24:18975315-18975041 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 132, 257

Conread position: 45-325
Cow position: chr24:33230780-33230509 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 117, 123

Conread position: 49-188
Cow position: chr24:15263978-15263838 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 49-192
Cow position: chr24:41412195-41412335 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 49-201
Cow position: chr24:40404710-40404858 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 49-317
Cow position: chr24:34008471-34008736 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 49-321
Cow position: chr24:5754937-5754676 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 49-321
Cow position: chr24:10125986-10125703 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 56, 164

Conread position: 49-321
Cow position: chr24:23186818-23187079 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 13

Conread position: 49-337
Cow position: chr24:18771080-18771366 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 25

Conread position: 50-260
Cow position: chr24:18615101-18614893 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 50-280
Cow position: chr24:35150619-35150396 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 50-297
Cow position: chr24:39791641-39791396 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 50-316
Cow position: chr24:19769596-19769336 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 29, 166

Conread position: 50-317
Cow position: chr24:17434711-17434454 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 253, 99

Conread position: 50-318
Cow position: chr24:18331821-18331565 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 155

Conread position: 50-321
Cow position: chr24:14171593-14171856 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 163, 42

Conread position: 50-321
Cow position: chr24:28326979-28327246 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 98

Conread position: 50-326
Cow position: chr24:17955344-17955610 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 50-334
Cow position: chr24:14648258-14648530 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 264, 140

Conread position: 51-321
Cow position: chr24:43683363-43683634 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 46, 158

Conread position: 51-337
Cow position: chr24:20741423-20741135 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 235

Conread position: 52-222
Cow position: chr24:11007556-11007389 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 96

Conread position: 58-295
Cow position: chr24:24662038-24662270 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 145, 0

Conread position: 58-337
Cow position: chr24:32369823-32370096 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 100, 10

Conread position: 59-208
Cow position: chr24:7390245-7390390 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 59-238
Cow position: chr24:16268037-16268212 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 59-241
Cow position: chr24:23000106-22999924 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 43

Conread position: 59-256
Cow position: chr24:34496216-34496016 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 149

Conread position: 59-316
Cow position: chr24:41068352-41068112 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 68

Conread position: 59-318
Cow position: chr24:43200184-43200435 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 25, 15

Conread position: 59-321
Cow position: chr24:42825413-42825656 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 20

Conread position: 61-321
Cow position: chr24:16895348-16895598 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 61-321
Cow position: chr24:32124553-32124800 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 139, 37

Conread position: 62-265
Cow position: chr24:27900816-27900617 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 42

Conread position: 62-286
Cow position: chr24:27418015-27418230 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 139, 53

Conread position: 62-289
Cow position: chr24:24061715-24061945 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 68

Conread position: 62-295
Cow position: chr24:814181-814406 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 139, 20

Conread position: 62-295
Cow position: chr24:2675399-2675182 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 62-321
Cow position: chr24:26455930-26455677 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 17

Conread position: 62-334
Cow position: chr24:29389323-29389066 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 143

Conread position: 63-315
Cow position: chr24:15544318-15544571 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 16

Conread position: 63-318
Cow position: chr24:43364445-43364200 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 8

Conread position: 63-334
Cow position: chr24:29673609-29673343 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 269, 27

Conread position: 65-321
Cow position: chr24:29679227-29679469 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 75, 0

Conread position: 68-318
Cow position: chr24:27054494-27054248 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 198, 230

Conread position: 69-287
Cow position: chr24:4725050-4724842 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 69-296
Cow position: chr24:2095800-2096032 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 70-207
Cow position: chr24:34556115-34555979 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 132, 25

Conread position: 70-249
Cow position: chr24:7046669-7046843 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 70-262
Cow position: chr24:13353120-13352930 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 149, 0

Conread position: 70-285
Cow position: chr24:41755943-41755732 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 31

Conread position: 70-294
Cow position: chr24:39905366-39905589 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 107

Conread position: 70-321
Cow position: chr24:33723764-33724007 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 90

Conread position: 70-326
Cow position: chr24:212068-211818 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 11

Conread position: 70-326
Cow position: chr24:30897457-30897707 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 250, 9

Conread position: 70-335
Cow position: chr24:39483559-39483299 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 81

Conread position: 70-338
Cow position: chr24:31324365-31324100 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 204, 31

Conread position: 71-186
Cow position: chr24:5413956-5414071 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 71-291
Cow position: chr24:3430813-3430596 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 82, 0

Conread position: 71-321
Cow position: chr24:8886990-8886749 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 135

Conread position: 71-321
Cow position: chr24:27052418-27052657 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 59

Conread position: 72-205
Cow position: chr24:29538427-29538565 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 74-252
Cow position: chr24:28045836-28045653 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 140

Conread position: 74-261
Cow position: chr24:19736256-19736442 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 116

Conread position: 74-295
Cow position: chr24:24755525-24755303 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 10, 127

Conread position: 75-318
Cow position: chr24:19118-19368 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 93, 154

Conread position: 83-328
Cow position: chr24:30544798-30545034 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 220, 64

Conread position: 86-257
Cow position: chr24:21895114-21894945 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 150, 37

Conread position: 86-262
Cow position: chr24:27511886-27511707 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 12

Conread position: 88-294
Cow position: chr24:1438207-1438414 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 120, 114

Conread position: 88-321
Cow position: chr24:43432853-43432630 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 76, 0

Conread position: 90-294
Cow position: chr24:27874654-27874462 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 21, 17

Conread position: 93-301
Cow position: chr24:3152520-3152727 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 23

Conread position: 93-317
Cow position: chr24:28599802-28600022 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 129, 164

Conread position: 95-328
Cow position: chr24:15508489-15508708 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 228, 5

Conread position: 99-295
Cow position: chr24:41986047-41985849 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 43

Conread position: 106-293
Cow position: chr24:40837817-40837639 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 106-295
Cow position: chr24:33221895-33222083 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 83

Conread position: 107-293
Cow position: chr24:15707401-15707579 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 107-336
Cow position: chr24:27340975-27341196 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 105

Conread position: 116-317
Cow position: chr24:20024648-20024453 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 117-326
Cow position: chr24:10012786-10012596 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 206, 83

Conread position: 128-317
Cow position: chr24:10841184-10841374 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 104, 80

Conread position: 128-317
Cow position: chr24:21918205-21918380 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 56

Conread position: 129-295
Cow position: chr24:28253729-28253565 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 73

Conread position: 142-321
Cow position: chr24:39218832-39219005 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 110, 11

Conread position: 144-318
Cow position: chr24:35794728-35794895 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 76

Conread position: 149-317
Cow position: chr24:34782784-34782944 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 12

Conread position: 149-336
Cow position: chr24:6160087-6160267 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 183, 54

Conread position: 150-321
Cow position: chr24:43635439-43635276 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 72

Conread position: 151-322
Cow position: chr24:25525041-25524884 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 152-321
Cow position: chr24:18405312-18405479 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 126

Conread position: 152-333
Cow position: chr24:34315355-34315176 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 165, 52

Conread position: 153-318
Cow position: chr24:27552892-27552736 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 153-336
Cow position: chr24:42007738-42007561 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 170, 59

Conread position: 155-293
Cow position: chr24:36554837-36554974 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 111, 67

Conread position: 162-295
Cow position: chr24:31382890-31382756 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 162-296
Cow position: chr24:885699-885829 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 162-321
Cow position: chr24:18695608-18695457 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 163-318
Cow position: chr24:30226928-30226781 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 163-334
Cow position: chr24:27968072-27967896 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 111

Conread position: 166-336
Cow position: chr24:29707809-29707980 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 45

Conread position: 172-344
Cow position: chr24:28023765-28023600 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 155, 47

Conread position: 204-311
Cow position: chr24:28143150-28143259 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.