Non-Coding RNA Search

Cow genome map


           Conread name:
           rret14_f13.y1
        

               Conread position:
               1-100
               

               Cow position:
               chr28:16964788-16964887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-135
               

               Cow position:
               chr28:21118856-21118722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr28:16200564-16200703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr28:17737974-17738113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr28:6301260-6301117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr28:4227652-4227510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               1-150
               

               Cow position:
               chr28:8655990-8656135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-150
               

               Cow position:
               chr28:21744888-21744745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-150
               

               Cow position:
               chr28:26269575-26269416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr28:13160367-13160521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr28:4870620-4870781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr28:22085369-22085519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr28:19395039-19394897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-159
               

               Cow position:
               chr28:2892432-2892273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-159
               

               Cow position:
               chr28:3678535-3678383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-164
               

               Cow position:
               chr28:2825598-2825435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-164
               

               Cow position:
               chr28:7644920-7644756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               139
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               115, 101
               

               Conread position:
               1-165
               

               Cow position:
               chr28:3423953-3423792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-166
               

               Cow position:
               chr28:10252739-10252903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr28:659111-659282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr28:4876614-4876456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr28:26530691-26530856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr28:20968400-20968571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-172
               

               Cow position:
               chr28:14242872-14242701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               1-172
               

               Cow position:
               chr28:20046718-20046561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr28:8716204-8716380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 168
               

               Conread position:
               1-175
               

               Cow position:
               chr28:28903383-28903553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr28:9418772-9418962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr28:19994770-19994942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               78, 138
               

               Conread position:
               1-177
               

               Cow position:
               chr28:2821437-2821256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr28:4074153-4073972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-180
               

               Cow position:
               chr28:11451329-11451492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr28:12974060-12973880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr28:18608189-18608369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr28:4163404-4163581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr28:11411363-11411538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               151, 42
               

               Conread position:
               1-183
               

               Cow position:
               chr28:5674048-5673872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               80, 46
               

               Conread position:
               1-183
               

               Cow position:
               chr28:6321995-6321814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 98
               

               Conread position:
               1-184
               

               Cow position:
               chr28:5441721-5441901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               1-186
               

               Cow position:
               chr28:16879744-16879567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr28:26826398-26826217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               1-188
               

               Cow position:
               chr28:7014630-7014445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-188
               

               Cow position:
               chr28:23262274-23262460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1-189
               

               Cow position:
               chr28:19038842-19039028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr28:18797486-18797309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-192
               

               Cow position:
               chr28:6563718-6563910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1-194
               

               Cow position:
               chr28:9384115-9384301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               1-195
               

               Cow position:
               chr28:13048105-13048298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr28:8259808-8259612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr28:5609742-5609938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               153, 58
               

               Conread position:
               1-198
               

               Cow position:
               chr28:19127996-19128187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr28:32358280-32358089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr28:5255047-5254854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 47
               

               Conread position:
               1-201
               

               Cow position:
               chr28:3741045-3740855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr28:4937063-4937263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr28:8304418-8304226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               161, 45
               

               Conread position:
               1-201
               

               Cow position:
               chr28:10495123-10495319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               184, 5
               

               Conread position:
               1-201
               

               Cow position:
               chr28:10958975-10958772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               151, 47
               

               Conread position:
               1-201
               

               Cow position:
               chr28:13133811-13133611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr28:13356190-13356388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 165
               

               Conread position:
               1-204
               

               Cow position:
               chr28:26820100-26820300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 111
               

               Conread position:
               1-205
               

               Cow position:
               chr28:3200638-3200434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr28:7131915-7132111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               1-205
               

               Cow position:
               chr28:27721872-27721677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               201, 103
               

               Conread position:
               1-208
               

               Cow position:
               chr28:19216988-19216793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               95, 36
               

               Conread position:
               1-211
               

               Cow position:
               chr28:7557554-7557770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 100
               

               Conread position:
               1-211
               

               Cow position:
               chr28:14644926-14645143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr28:20174014-20173801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 94
               

               Conread position:
               1-217
               

               Cow position:
               chr28:8827340-8827127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               82, 146
               

               Conread position:
               1-219
               

               Cow position:
               chr28:4186079-4185871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-219
               

               Cow position:
               chr28:16346360-16346570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-219
               

               Cow position:
               chr28:17680801-17680584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 202
               

               Conread position:
               1-229
               

               Cow position:
               chr28:3445304-3445528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               82, 55
               

               Conread position:
               1-231
               

               Cow position:
               chr28:11059667-11059455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr28:34843396-34843622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               198, 130
               

               Conread position:
               1-233
               

               Cow position:
               chr28:5236050-5235832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-246
               

               Cow position:
               chr28:10978014-10977780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               123, 14
               

               Conread position:
               1-249
               

               Cow position:
               chr28:4013259-4013021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-249
               

               Cow position:
               chr28:5630275-5630020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 104
               

               Conread position:
               1-251
               

               Cow position:
               chr28:3410813-3411059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 40
               

               Conread position:
               1-251
               

               Cow position:
               chr28:13370963-13371207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               1-252
               

               Cow position:
               chr28:20759517-20759770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               47, 116
               

               Conread position:
               1-261
               

               Cow position:
               chr28:11814903-11815156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               113, 46
               

               Conread position:
               1-261
               

               Cow position:
               chr28:24966562-24966307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               1-264
               

               Cow position:
               chr28:8291589-8291344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               208, 46
               

               Conread position:
               1-265
               

               Cow position:
               chr28:5138823-5139078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               206, 42
               

               Conread position:
               1-265
               

               Cow position:
               chr28:13245740-13245478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr28:16411160-16410905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-267
               

               Cow position:
               chr28:4046020-4045769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-268
               

               Cow position:
               chr28:16405925-16405662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               1-270
               

               Cow position:
               chr28:5262695-5262435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               113, 127
               

               Conread position:
               1-272
               

               Cow position:
               chr28:777852-777577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               1-284
               

               Cow position:
               chr28:19221967-19222250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 187
               

               Conread position:
               1-285
               

               Cow position:
               chr28:17071516-17071232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               241, 221
               

               Conread position:
               1-286
               

               Cow position:
               chr28:4182177-4181900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               276, 31
               

               Conread position:
               1-291
               

               Cow position:
               chr28:6358234-6358517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               67, 188
               

               Conread position:
               1-293
               

               Cow position:
               chr28:8359076-8358796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               210, 143
               

               Conread position:
               1-293
               

               Cow position:
               chr28:15263542-15263826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               194, 66
               

               Conread position:
               1-293
               

               Cow position:
               chr28:18625413-18625120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               199, 219
               

               Conread position:
               1-294
               

               Cow position:
               chr28:1315376-1315675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               187, 60
               

               Conread position:
               1-294
               

               Cow position:
               chr28:14998240-14997954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               1-294
               

               Cow position:
               chr28:19564059-19564338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               1-295
               

               Cow position:
               chr28:4138491-4138782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               65, 202
               

               Conread position:
               1-295
               

               Cow position:
               chr28:10480627-10480931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 215
               

               Conread position:
               1-295
               

               Cow position:
               chr28:11079476-11079195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               1-295
               

               Cow position:
               chr28:12672285-12672572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 203
               

               Conread position:
               1-295
               

               Cow position:
               chr28:18791210-18790903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               55, 110
               

               Conread position:
               1-295
               

               Cow position:
               chr28:23460320-23460040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-297
               

               Cow position:
               chr28:10606462-10606741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 19
               

               Conread position:
               1-298
               

               Cow position:
               chr28:26055654-26055361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               205, 46
               

               Conread position:
               1-299
               

               Cow position:
               chr28:3914881-3914595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               162, 36
               

               Conread position:
               1-299
               

               Cow position:
               chr28:18369837-18370124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               1-314
               

               Cow position:
               chr28:22308820-22308523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               1-315
               

               Cow position:
               chr28:7144976-7144662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 42
               

               Conread position:
               1-316
               

               Cow position:
               chr28:8347910-8347603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               1-316
               

               Cow position:
               chr28:10681646-10681949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               197, 127
               

               Conread position:
               1-316
               

               Cow position:
               chr28:12951592-12951301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-317
               

               Cow position:
               chr28:10745391-10745081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               201, 61
               

               Conread position:
               1-317
               

               Cow position:
               chr28:26982560-26982871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 37
               

               Conread position:
               1-317
               

               Cow position:
               chr28:27313553-27313873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               204, 239
               

               Conread position:
               1-317
               

               Cow position:
               chr28:30293409-30293719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               59, 154
               

               Conread position:
               1-318
               

               Cow position:
               chr28:3449485-3449170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 42
               

               Conread position:
               1-318
               

               Cow position:
               chr28:3492611-3492914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-318
               

               Cow position:
               chr28:12430783-12430478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               202, 74
               

               Conread position:
               1-318
               

               Cow position:
               chr28:27218501-27218195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-318
               

               Cow position:
               chr28:34877796-34878101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 91
               

               Conread position:
               1-321
               

               Cow position:
               chr28:3023740-3024044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               1-321
               

               Cow position:
               chr28:4159140-4158826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 195
               

               Conread position:
               1-321
               

               Cow position:
               chr28:4282313-4282622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-321
               

               Cow position:
               chr28:5224880-5224581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               18, 114
               

               Conread position:
               1-321
               

               Cow position:
               chr28:5236419-5236731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               49, 207
               

               Conread position:
               1-321
               

               Cow position:
               chr28:8140662-8140350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               1-321
               

               Cow position:
               chr28:9426176-9426484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-321
               

               Cow position:
               chr28:14657892-14657568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               120, 215
               

               Conread position:
               1-321
               

               Cow position:
               chr28:16204154-16204461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               83, 200
               

               Conread position:
               1-321
               

               Cow position:
               chr28:19262408-19262721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 0
               

               Conread position:
               1-321
               

               Cow position:
               chr28:20124957-20124651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               1-321
               

               Cow position:
               chr28:20409567-20409260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               1-321
               

               Cow position:
               chr28:24082446-24082135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               206, 48
               

               Conread position:
               1-321
               

               Cow position:
               chr28:29988933-29989245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               193, 46
               

               Conread position:
               1-322
               

               Cow position:
               chr28:5200003-5199683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               153, 204
               

               Conread position:
               1-326
               

               Cow position:
               chr28:4913916-4914235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               83, 112
               

               Conread position:
               1-326
               

               Cow position:
               chr28:34430247-34430560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1-328
               

               Cow position:
               chr28:32593457-32593790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 303
               

               Conread position:
               1-331
               

               Cow position:
               chr28:11346313-11346630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 47
               

               Conread position:
               1-333
               

               Cow position:
               chr28:4884077-4884409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               1-333
               

               Cow position:
               chr28:7371934-7372272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               1-333
               

               Cow position:
               chr28:13474475-13474156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               1-333
               

               Cow position:
               chr28:26743807-26743475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               1-334
               

               Cow position:
               chr28:5144338-5144668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 210
               

               Conread position:
               1-334
               

               Cow position:
               chr28:21207201-21207551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               53, 42
               

               Conread position:
               1-336
               

               Cow position:
               chr28:5436910-5437242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               306, 103
               

               Conread position:
               1-336
               

               Cow position:
               chr28:9100105-9099787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               325, 98
               

               Conread position:
               1-336
               

               Cow position:
               chr28:9636281-9636607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               1-336
               

               Cow position:
               chr28:16412931-16412600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               117, 25
               

               Conread position:
               1-336
               

               Cow position:
               chr28:16419351-16419020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               228, 25
               

               Conread position:
               1-336
               

               Cow position:
               chr28:19055193-19054866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 108
               

               Conread position:
               1-336
               

               Cow position:
               chr28:21103644-21103991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               1-336
               

               Cow position:
               chr28:24367766-24368082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               273, 109
               

               Conread position:
               1-336
               

               Cow position:
               chr28:34230407-34230081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 201
               

               Conread position:
               1-337
               

               Cow position:
               chr28:1383096-1383424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 188
               

               Conread position:
               1-337
               

               Cow position:
               chr28:10669763-10669423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               161, 218
               

               Conread position:
               1-337
               

               Cow position:
               chr28:16085490-16085173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 19
               

               Conread position:
               1-337
               

               Cow position:
               chr28:22323435-22323117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               194, 55
               

               Conread position:
               1-337
               

               Cow position:
               chr28:25973718-25973383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               165, 201
               

               Conread position:
               1-337
               

               Cow position:
               chr28:30303032-30303343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               172, 48
               

               Conread position:
               2-112
               

               Cow position:
               chr28:5428582-5428686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               2-123
               

               Cow position:
               chr28:3311046-3311167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-126
               

               Cow position:
               chr28:21263329-21263211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               2-144
               

               Cow position:
               chr28:11562068-11562210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-147
               

               Cow position:
               chr28:19118147-19118002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-158
               

               Cow position:
               chr28:17620184-17620338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               2-167
               

               Cow position:
               chr28:22307184-22307022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               2-187
               

               Cow position:
               chr28:5552532-5552722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               50, 169
               

               Conread position:
               2-188
               

               Cow position:
               chr28:5188255-5188437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               114, 45
               

               Conread position:
               2-192
               

               Cow position:
               chr28:15362753-15362567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               2-198
               

               Cow position:
               chr28:5232113-5231920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               2-201
               

               Cow position:
               chr28:11398619-11398818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-201
               

               Cow position:
               chr28:26943977-26944179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               127, 77
               

               Conread position:
               2-209
               

               Cow position:
               chr28:22133083-22132881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               204, 39
               

               Conread position:
               2-241
               

               Cow position:
               chr28:4873149-4873406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               42, 236
               

               Conread position:
               2-282
               

               Cow position:
               chr28:11197497-11197771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               264, 155
               

               Conread position:
               2-290
               

               Cow position:
               chr28:11527084-11527365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               2-295
               

               Cow position:
               chr28:3011092-3011384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 130
               

               Conread position:
               2-295
               

               Cow position:
               chr28:4643595-4643875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               2-295
               

               Cow position:
               chr28:11762873-11762586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               2-296
               

               Cow position:
               chr28:1838171-1837880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               56, 132
               

               Conread position:
               2-315
               

               Cow position:
               chr28:3406237-3406556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               162, 305
               

               Conread position:
               2-315
               

               Cow position:
               chr28:30234559-30234265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               2-316
               

               Cow position:
               chr28:11866493-11866792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               2-317
               

               Cow position:
               chr28:7512406-7512716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               95, 99
               

               Conread position:
               2-317
               

               Cow position:
               chr28:11426373-11426670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               2-317
               

               Cow position:
               chr28:23616580-23616279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               2-318
               

               Cow position:
               chr28:5684875-5684581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               207, 60
               

               Conread position:
               2-321
               

               Cow position:
               chr28:3143710-3144024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               193, 41
               

               Conread position:
               2-321
               

               Cow position:
               chr28:5818013-5817710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 34
               

               Conread position:
               2-321
               

               Cow position:
               chr28:11585034-11585337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               2-321
               

               Cow position:
               chr28:29416550-29416845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               81, 40
               

               Conread position:
               2-321
               

               Cow position:
               chr28:30746563-30746860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               2-326
               

               Cow position:
               chr28:7267774-7268073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               2-333
               

               Cow position:
               chr28:2899173-2898849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 208
               

               Conread position:
               2-336
               

               Cow position:
               chr28:751403-751082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               2-336
               

               Cow position:
               chr28:24672443-24672117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               2-336
               

               Cow position:
               chr28:34442581-34442906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               2-337
               

               Cow position:
               chr28:7697804-7698130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 144
               

               Conread position:
               2-337
               

               Cow position:
               chr28:9285202-9285524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               3-139
               

               Cow position:
               chr28:16252234-16252364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-150
               

               Cow position:
               chr28:9677840-9677699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               3-151
               

               Cow position:
               chr28:3729843-3729990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               3-154
               

               Cow position:
               chr28:34830331-34830181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               3-156
               

               Cow position:
               chr28:11239137-11239296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               3-158
               

               Cow position:
               chr28:118788-118631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-162
               

               Cow position:
               chr28:7413837-7413677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               3-167
               

               Cow position:
               chr28:3137727-3137556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               3-167
               

               Cow position:
               chr28:9109385-9109229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               3-171
               

               Cow position:
               chr28:32014959-32014793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               3-172
               

               Cow position:
               chr28:117584-117755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-188
               

               Cow position:
               chr28:8396503-8396327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               3-201
               

               Cow position:
               chr28:11743654-11743840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               3-208
               

               Cow position:
               chr28:17739999-17739798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr28:28561075-28560858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               3-219
               

               Cow position:
               chr28:17948943-17949153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               94, 40
               

               Conread position:
               3-234
               

               Cow position:
               chr28:3726034-3726264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               3-253
               

               Cow position:
               chr28:17012128-17012361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               3-268
               

               Cow position:
               chr28:2524119-2523856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               203, 113
               

               Conread position:
               3-268
               

               Cow position:
               chr28:16416324-16416068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-274
               

               Cow position:
               chr28:11559459-11559724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               3-291
               

               Cow position:
               chr28:25057133-25056863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               3-293
               

               Cow position:
               chr28:7008807-7009086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-294
               

               Cow position:
               chr28:12933559-12933841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               148, 43
               

               Conread position:
               3-295
               

               Cow position:
               chr28:1632471-1632767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               3-295
               

               Cow position:
               chr28:3484760-3484466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               3-298
               

               Cow position:
               chr28:13527373-13527090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               60, 161
               

               Conread position:
               3-313
               

               Cow position:
               chr28:10615773-10616088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 59
               

               Conread position:
               3-317
               

               Cow position:
               chr28:4440473-4440175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               238, 195
               

               Conread position:
               3-317
               

               Cow position:
               chr28:22346199-22345891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               81, 202
               

               Conread position:
               3-318
               

               Cow position:
               chr28:4834669-4834971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-321
               

               Cow position:
               chr28:8787713-8787407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               3-321
               

               Cow position:
               chr28:10053155-10053470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 39
               

               Conread position:
               3-321
               

               Cow position:
               chr28:21363917-21363614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               3-321
               

               Cow position:
               chr28:21845128-21844827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               195, 43
               

               Conread position:
               3-321
               

               Cow position:
               chr28:21868631-21868323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               3-321
               

               Cow position:
               chr28:23531040-23530736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               207, 66
               

               Conread position:
               3-321
               

               Cow position:
               chr28:28765726-28766038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 199
               

               Conread position:
               3-326
               

               Cow position:
               chr28:4016700-4016401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               3-328
               

               Cow position:
               chr28:11884354-11884666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               290, 27
               

               Conread position:
               3-329
               

               Cow position:
               chr28:23724295-23724602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               109, 46
               

               Conread position:
               3-336
               

               Cow position:
               chr28:4071135-4070823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               145, 44
               

               Conread position:
               3-338
               

               Cow position:
               chr28:22332705-22332386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               4-166
               

               Cow position:
               chr28:20281926-20281772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               4-200
               

               Cow position:
               chr28:555669-555484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               4-241
               

               Cow position:
               chr28:33322630-33322396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               4-265
               

               Cow position:
               chr28:4809948-4809706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 31
               

               Conread position:
               4-295
               

               Cow position:
               chr28:25727546-25727267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               4-316
               

               Cow position:
               chr28:30937505-30937790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               4-318
               

               Cow position:
               chr28:34134031-34133733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               186, 19
               

               Conread position:
               5-153
               

               Cow position:
               chr28:2077673-2077527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-165
               

               Cow position:
               chr28:11827860-11827703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               5-175
               

               Cow position:
               chr28:4022848-4022678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-241
               

               Cow position:
               chr28:20397196-20397428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               5-274
               

               Cow position:
               chr28:7350825-7350567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               190, 42
               

               Conread position:
               5-301
               

               Cow position:
               chr28:10863623-10863899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               5-317
               

               Cow position:
               chr28:10057413-10057720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               5-321
               

               Cow position:
               chr28:5931518-5931220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               230, 38
               

               Conread position:
               5-326
               

               Cow position:
               chr28:10845274-10844981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               5-328
               

               Cow position:
               chr28:5204362-5204047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 23
               

               Conread position:
               6-210
               

               Cow position:
               chr28:21008499-21008694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               6-270
               

               Cow position:
               chr28:10298015-10297776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               6-321
               

               Cow position:
               chr28:2819943-2819628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               206, 35
               

               Conread position:
               6-321
               

               Cow position:
               chr28:4307722-4308041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               6-337
               

               Cow position:
               chr28:4881072-4881395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 44
               

               Conread position:
               7-267
               

               Cow position:
               chr28:7927339-7927091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               186, 42
               

               Conread position:
               7-286
               

               Cow position:
               chr28:11422645-11422918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               7-321
               

               Cow position:
               chr28:25700698-25701000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               198, 35
               

               Conread position:
               7-336
               

               Cow position:
               chr28:26103868-26103563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               169, 35
               

               Conread position:
               8-323
               

               Cow position:
               chr28:5577701-5577386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               45, 8
               

               Conread position:
               8-326
               

               Cow position:
               chr28:3408053-3408353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               276, 45
               

               Conread position:
               10-177
               

               Cow position:
               chr28:8167187-8167347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               10-215
               

               Cow position:
               chr28:6283322-6283522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               11-158
               

               Cow position:
               chr28:4311497-4311638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               11-168
               

               Cow position:
               chr28:13448290-13448135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               11-179
               

               Cow position:
               chr28:24996453-24996612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               11-249
               

               Cow position:
               chr28:7437300-7437525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               11-268
               

               Cow position:
               chr28:24707074-24706819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 199
               

               Conread position:
               11-288
               

               Cow position:
               chr28:11307348-11307612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 192
               

               Conread position:
               11-294
               

               Cow position:
               chr28:23793145-23793415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               140, 37
               

               Conread position:
               11-295
               

               Cow position:
               chr28:23447661-23447935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               107, 25
               

               Conread position:
               11-297
               

               Cow position:
               chr28:25400042-25399767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               11-315
               

               Cow position:
               chr28:16416810-16416516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               11-336
               

               Cow position:
               chr28:14720619-14720923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               11-337
               

               Cow position:
               chr28:6059296-6059617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               15, 195
               

               Conread position:
               12-268
               

               Cow position:
               chr28:16403523-16403273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               12-296
               

               Cow position:
               chr28:17601699-17601987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 187
               

               Conread position:
               13-315
               

               Cow position:
               chr28:5193491-5193193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               84, 47
               

               Conread position:
               13-327
               

               Cow position:
               chr28:1538332-1538030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               14-296
               

               Cow position:
               chr28:9812435-9812170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               273, 35
               

               Conread position:
               14-315
               

               Cow position:
               chr28:28631900-28631599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 191
               

               Conread position:
               17-212
               

               Cow position:
               chr28:7541704-7541907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 183
               

               Conread position:
               22-321
               

               Cow position:
               chr28:25596778-25596500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               23-249
               

               Cow position:
               chr28:4823765-4823541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 172
               

               Conread position:
               25-289
               

               Cow position:
               chr28:15601431-15601170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               27-286
               

               Cow position:
               chr28:32174785-32174527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               15, 160
               

               Conread position:
               31-193
               

               Cow position:
               chr28:30081576-30081737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-201
               

               Cow position:
               chr28:8149484-8149653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               38-321
               

               Cow position:
               chr28:5771504-5771234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               151, 32
               

               Conread position:
               38-337
               

               Cow position:
               chr28:7415870-7416159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               39-175
               

               Cow position:
               chr28:2743223-2743086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               39-176
               

               Cow position:
               chr28:29041911-29042050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               39-201
               

               Cow position:
               chr28:2772851-2772692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               39-295
               

               Cow position:
               chr28:11047739-11047480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               117, 170
               

               Conread position:
               39-295
               

               Cow position:
               chr28:26220397-26220144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               154, 76
               

               Conread position:
               39-298
               

               Cow position:
               chr28:16110078-16109828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               168, 85
               

               Conread position:
               39-318
               

               Cow position:
               chr28:2752353-2752627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               39-321
               

               Cow position:
               chr28:19025866-19026144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 19
               

               Conread position:
               39-321
               

               Cow position:
               chr28:31109860-31110138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               33, 164
               

               Conread position:
               39-321
               

               Cow position:
               chr28:33052179-33051896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               39-335
               

               Cow position:
               chr28:16402032-16401752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               251, 49
               

               Conread position:
               39-360
               

               Cow position:
               chr28:8021963-8022280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               183, 29
               

               Conread position:
               40-154
               

               Cow position:
               chr28:16353552-16353667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               40-175
               

               Cow position:
               chr28:24674609-24674474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               41-265
               

               Cow position:
               chr28:17601415-17601636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               204, 166
               

               Conread position:
               42-333
               

               Cow position:
               chr28:13865976-13865698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               5, 9
               

               Conread position:
               44-187
               

               Cow position:
               chr28:5152736-5152594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               44-317
               

               Cow position:
               chr28:14649477-14649220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 15
               

               Conread position:
               45-205
               

               Cow position:
               chr28:23047753-23047595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               45-317
               

               Cow position:
               chr28:18354194-18354452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               45-318
               

               Cow position:
               chr28:8408873-8408605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 163
               

               Conread position:
               47-294
               

               Cow position:
               chr28:29434297-29434535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               49-236
               

               Cow position:
               chr28:5650607-5650790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               49-261
               

               Cow position:
               chr28:13090395-13090604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               49-265
               

               Cow position:
               chr28:12070362-12070154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               49-295
               

               Cow position:
               chr28:2960700-2960943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               111, 10
               

               Conread position:
               49-295
               

               Cow position:
               chr28:28164216-28163975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               49-299
               

               Cow position:
               chr28:25195832-25195598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               49-321
               

               Cow position:
               chr28:11752010-11752273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               50-175
               

               Cow position:
               chr28:20013567-20013440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               50-273
               

               Cow position:
               chr28:7388642-7388857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               208, 90
               

               Conread position:
               50-294
               

               Cow position:
               chr28:2131794-2132033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               50-295
               

               Cow position:
               chr28:23410193-23410436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               50-296
               

               Cow position:
               chr28:21355361-21355111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 140
               

               Conread position:
               50-317
               

               Cow position:
               chr28:19079715-19079973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               50-321
               

               Cow position:
               chr28:4355676-4355416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               50-326
               

               Cow position:
               chr28:27161197-27161469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               50-333
               

               Cow position:
               chr28:20313409-20313126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 162
               

               Conread position:
               51-193
               

               Cow position:
               chr28:10163926-10163787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               51-248
               

               Cow position:
               chr28:4765804-4765611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               51-270
               

               Cow position:
               chr28:25677212-25677433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               51-317
               

               Cow position:
               chr28:3078555-3078809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               52-301
               

               Cow position:
               chr28:25249482-25249237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               179, 148
               

               Conread position:
               52-321
               

               Cow position:
               chr28:616510-616252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               16, 46
               

               Conread position:
               54-240
               

               Cow position:
               chr28:7805295-7805481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               55-318
               

               Cow position:
               chr28:21598126-21598383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               59-171
               

               Cow position:
               chr28:16692044-16691932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-182
               

               Cow position:
               chr28:26784121-26784243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               59-191
               

               Cow position:
               chr28:7498026-7498157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               59-270
               

               Cow position:
               chr28:10588901-10589109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               136, 15
               

               Conread position:
               59-274
               

               Cow position:
               chr28:8147743-8147952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               59-294
               

               Cow position:
               chr28:17398113-17398335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               59-294
               

               Cow position:
               chr28:17414354-17414576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               59-294
               

               Cow position:
               chr28:26685232-26685004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               143, 20
               

               Conread position:
               59-295
               

               Cow position:
               chr28:5166888-5166655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 71
               

               Conread position:
               59-295
               

               Cow position:
               chr28:26922247-26922478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               59-321
               

               Cow position:
               chr28:662229-661978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               34, 147
               

               Conread position:
               59-321
               

               Cow position:
               chr28:23007609-23007866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 147
               

               Conread position:
               59-335
               

               Cow position:
               chr28:22321540-22321277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               260, 111
               

               Conread position:
               60-268
               

               Cow position:
               chr28:30865537-30865335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               60-287
               

               Cow position:
               chr28:11817844-11818066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               33, 146
               

               Conread position:
               60-317
               

               Cow position:
               chr28:14934078-14933837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               61-210
               

               Cow position:
               chr28:32179812-32179666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 85
               

               Conread position:
               61-295
               

               Cow position:
               chr28:23676258-23676029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               23, 142
               

               Conread position:
               61-318
               

               Cow position:
               chr28:25763142-25762896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 142
               

               Conread position:
               61-321
               

               Cow position:
               chr28:33163345-33163596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               115, 81
               

               Conread position:
               62-260
               

               Cow position:
               chr28:7156955-7156764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               62-269
               

               Cow position:
               chr28:18934572-18934367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               62-316
               

               Cow position:
               chr28:7865447-7865197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 144
               

               Conread position:
               62-335
               

               Cow position:
               chr28:24343484-24343225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               35, 39
               

               Conread position:
               63-296
               

               Cow position:
               chr28:14512650-14512409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               63-328
               

               Cow position:
               chr28:26719460-26719210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               260, 141
               

               Conread position:
               64-334
               

               Cow position:
               chr28:22571552-22571813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               142, 106
               

               Conread position:
               69-172
               

               Cow position:
               chr28:16389017-16388914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-260
               

               Cow position:
               chr28:4841280-4841474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 30
               

               Conread position:
               70-292
               

               Cow position:
               chr28:13608008-13607777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               71-321
               

               Cow position:
               chr28:2862977-2862733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               71-321
               

               Cow position:
               chr28:25728304-25728066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               72-262
               

               Cow position:
               chr28:3160846-3161032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               73-198
               

               Cow position:
               chr28:19345357-19345232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               88, 46
               

               Conread position:
               74-294
               

               Cow position:
               chr28:34247922-34248133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               17, 130
               

               Conread position:
               74-321
               

               Cow position:
               chr28:7228283-7228515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               76-317
               

               Cow position:
               chr28:21502501-21502266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               29, 131
               

               Conread position:
               76-317
               

               Cow position:
               chr28:32365949-32365718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 136
               

               Conread position:
               76-318
               

               Cow position:
               chr28:11786612-11786842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               8, 132
               

               Conread position:
               81-196
               

               Cow position:
               chr28:23834504-23834389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               82-321
               

               Cow position:
               chr28:18186654-18186422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               127, 104
               

               Conread position:
               84-334
               

               Cow position:
               chr28:17235640-17235879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               88-318
               

               Cow position:
               chr28:5297370-5297147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               88-321
               

               Cow position:
               chr28:5792800-5792568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               114, 119
               

               Conread position:
               88-321
               

               Cow position:
               chr28:25283286-25283075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               90-301
               

               Cow position:
               chr28:21380972-21380761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 113
               

               Conread position:
               91-321
               

               Cow position:
               chr28:18759956-18760179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 110
               

               Conread position:
               99-317
               

               Cow position:
               chr28:10529409-10529614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               99-318
               

               Cow position:
               chr28:13267870-13267656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               99-321
               

               Cow position:
               chr28:31987695-31987470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               86, 107
               

               Conread position:
               100-293
               

               Cow position:
               chr28:12947029-12946839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               100-295
               

               Cow position:
               chr28:25806653-25806461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               100-335
               

               Cow position:
               chr28:15538614-15538841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               228, 100
               

               Conread position:
               101-336
               

               Cow position:
               chr28:16770670-16770434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               106-293
               

               Cow position:
               chr28:12363083-12363270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               139, 113
               

               Conread position:
               106-318
               

               Cow position:
               chr28:5827024-5826814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               160, 97
               

               Conread position:
               107-326
               

               Cow position:
               chr28:25071192-25070981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               186, 76
               

               Conread position:
               109-295
               

               Cow position:
               chr28:3726955-3726772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               150, 38
               

               Conread position:
               111-328
               

               Cow position:
               chr28:7548989-7549205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               180, 108
               

               Conread position:
               116-317
               

               Cow position:
               chr28:22485317-22485117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 129
               

               Conread position:
               125-335
               

               Cow position:
               chr28:4058037-4057835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               195, 77
               

               Conread position:
               130-321
               

               Cow position:
               chr28:3714851-3714669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               139-321
               

               Cow position:
               chr28:16252815-16252993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               139-326
               

               Cow position:
               chr28:22339035-22338857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 83
               

               Conread position:
               141-328
               

               Cow position:
               chr28:26269373-26269183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               142-296
               

               Cow position:
               chr28:17288254-17288108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               144-336
               

               Cow position:
               chr28:28903627-28903817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 158
               

               Conread position:
               150-317
               

               Cow position:
               chr28:25459564-25459399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 58
               

               Conread position:
               151-321
               

               Cow position:
               chr28:3105286-3105108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               154-295
               

               Cow position:
               chr28:5552912-5553054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               156-316
               

               Cow position:
               chr28:33893986-33894138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               161-321
               

               Cow position:
               chr28:19222583-19222730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               161-336
               

               Cow position:
               chr28:22739811-22739645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               162-280
               

               Cow position:
               chr28:20968842-20968956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               162-315
               

               Cow position:
               chr28:118032-118179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               162-328
               

               Cow position:
               chr28:19394637-19394478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               162-336
               

               Cow position:
               chr28:4022406-4022234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               158, 45
               

               Conread position:
               162-336
               

               Cow position:
               chr28:19024163-19023990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               46, 102
               

               Conread position:
               162-337
               

               Cow position:
               chr28:5773654-5773490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               170, 42
               

               Conread position:
               165-295
               

               Cow position:
               chr28:9390348-9390475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               166-337
               

               Cow position:
               chr28:22170695-22170868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               168-355
               

               Cow position:
               chr28:23840216-23840030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               170-295
               

               Cow position:
               chr28:7644464-7644338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               176-289
               

               Cow position:
               chr28:27428751-27428638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               215-335
               

               Cow position:
               chr28:24996620-24996734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               322-420
               

               Cow position:
               chr28:20253335-20253238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               94, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-100
Cow position:	chr28:16964788-16964887 (view UCSC Genome Browser custom track)
Alignm length:	100
Alignm identity:	82
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-135
Cow position:	chr28:21118856-21118722 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	101
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	1-140
Cow position:	chr28:16200564-16200703 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	114
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	0, 0
Conread position:	1-144
Cow position:	chr28:6301260-6301117 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	113
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	0, 0
Conread position:	1-146
Cow position:	chr28:4227652-4227510 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	111
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	51, 24
Conread position:	1-150
Cow position:	chr28:8655990-8656135 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	113
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	28, 0
Conread position:	1-155
Cow position:	chr28:13160367-13160521 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	109
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-156
Cow position:	chr28:4870620-4870781 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	122
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	54, 0
Conread position:	1-157
Cow position:	chr28:22085369-22085519 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	120
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	41, 0
Conread position:	1-158
Cow position:	chr28:19395039-19394897 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	121
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	9, 0
Conread position:	1-159
Cow position:	chr28:2892432-2892273 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	122
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	65, 0
Conread position:	1-164
Cow position:	chr28:2825598-2825435 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	115
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-165
Cow position:	chr28:3423953-3423792 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	121
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	66, 0
Conread position:	1-166
Cow position:	chr28:10252739-10252903 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	121
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	69, 0
Conread position:	1-167
Cow position:	chr28:659111-659282 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	128
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	40, 0
Conread position:	1-170
Cow position:	chr28:26530691-26530856 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	124
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	42, 0
Conread position:	1-171
Cow position:	chr28:20968400-20968571 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	126
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	69, 0
Conread position:	1-172
Cow position:	chr28:14242872-14242701 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	133
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	96, 37
Conread position:	1-173
Cow position:	chr28:8716204-8716380 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	131
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	56, 168
Conread position:	1-175
Cow position:	chr28:28903383-28903553 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	128
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	54, 0