Cow genome map

Conread name: rret14_f13.y1

Conread position: 1-136
Cow position: chr9:11200082-11199947 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-136
Cow position: chr9:13722283-13722148 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-140
Cow position: chr9:62136259-62136120 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-143
Cow position: chr9:17769179-17769315 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-144
Cow position: chr9:28342797-28342652 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 1-145
Cow position: chr9:26394490-26394350 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 1-146
Cow position: chr9:34760508-34760364 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 1-147
Cow position: chr9:63185839-63185693 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 58

Conread position: 1-152
Cow position: chr9:61019507-61019356 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 125
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr9:27686440-27686594 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 74

Conread position: 1-156
Cow position: chr9:44625077-44625222 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-158
Cow position: chr9:1403679-1403524 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 0

Conread position: 1-158
Cow position: chr9:14357270-14357427 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-158
Cow position: chr9:53323929-53323771 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 0

Conread position: 1-158
Cow position: chr9:58440521-58440358 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 22

Conread position: 1-161
Cow position: chr9:21780781-21780939 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-162
Cow position: chr9:5772822-5772661 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-162
Cow position: chr9:35209547-35209708 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 68

Conread position: 1-164
Cow position: chr9:1712850-1712688 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 1-164
Cow position: chr9:36401802-36401647 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-165
Cow position: chr9:8645121-8645286 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 1-165
Cow position: chr9:40984362-40984524 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 1-165
Cow position: chr9:52998522-52998361 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 1-166
Cow position: chr9:22447437-22447274 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 1-167
Cow position: chr9:34276355-34276189 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chr9:34362594-34362758 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-168
Cow position: chr9:37955316-37955149 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-168
Cow position: chr9:46344783-46344958 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 1-168
Cow position: chr9:53632068-53631904 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 144, 0

Conread position: 1-169
Cow position: chr9:35403444-35403606 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 1-170
Cow position: chr9:11271486-11271333 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 1-170
Cow position: chr9:28315282-28315455 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 0

Conread position: 1-171
Cow position: chr9:6929937-6929767 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 163

Conread position: 1-171
Cow position: chr9:31344752-31344582 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-172
Cow position: chr9:8537164-8537331 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 149, 88

Conread position: 1-172
Cow position: chr9:9557541-9557712 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 101

Conread position: 1-172
Cow position: chr9:13993621-13993791 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 1-172
Cow position: chr9:40603525-40603694 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-173
Cow position: chr9:37951042-37950871 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 161, 0

Conread position: 1-174
Cow position: chr9:2397668-2397835 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 1-174
Cow position: chr9:30665142-30664960 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-175
Cow position: chr9:5068695-5068870 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 1-175
Cow position: chr9:41470243-41470069 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-177
Cow position: chr9:34707452-34707281 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 46

Conread position: 1-178
Cow position: chr9:55013483-55013301 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 134

Conread position: 1-179
Cow position: chr9:55892409-55892235 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-180
Cow position: chr9:35306494-35306312 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 29

Conread position: 1-182
Cow position: chr9:43679979-43680156 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-184
Cow position: chr9:8613355-8613173 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 124, 10

Conread position: 1-184
Cow position: chr9:8767557-8767378 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 55

Conread position: 1-184
Cow position: chr9:62631809-62631633 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 48

Conread position: 1-185
Cow position: chr9:48115541-48115718 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 1-188
Cow position: chr9:20637233-20637415 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 1-189
Cow position: chr9:22165859-22165670 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 1-193
Cow position: chr9:39148940-39149126 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 1-193
Cow position: chr9:44526967-44527153 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 132

Conread position: 1-194
Cow position: chr9:41644895-41644702 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-196
Cow position: chr9:12337758-12337952 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 51

Conread position: 1-197
Cow position: chr9:23971035-23970845 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 37

Conread position: 1-197
Cow position: chr9:34484448-34484646 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 80

Conread position: 1-198
Cow position: chr9:32662178-32661974 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-199
Cow position: chr9:55495131-55494933 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-200
Cow position: chr9:7805642-7805828 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-200
Cow position: chr9:7806096-7805907 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 1-200
Cow position: chr9:29984319-29984518 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-200
Cow position: chr9:36627980-36628171 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 1-200
Cow position: chr9:52689756-52689557 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-201
Cow position: chr9:14738110-14738304 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 1-201
Cow position: chr9:47214692-47214490 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 1-201
Cow position: chr9:48016847-48017036 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 140, 58

Conread position: 1-201
Cow position: chr9:58369135-58368942 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 1-202
Cow position: chr9:48017909-48017718 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 1-204
Cow position: chr9:59897454-59897646 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-205
Cow position: chr9:28156558-28156752 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 1-205
Cow position: chr9:54986303-54986096 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 0

Conread position: 1-206
Cow position: chr9:4241265-4241466 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 45

Conread position: 1-206
Cow position: chr9:45749290-45749501 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 85, 62

Conread position: 1-212
Cow position: chr9:9091250-9091038 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 162, 192

Conread position: 1-213
Cow position: chr9:37198985-37199193 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 192, 42

Conread position: 1-213
Cow position: chr9:42586690-42586487 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 199, 42

Conread position: 1-216
Cow position: chr9:17277034-17276819 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 200, 210

Conread position: 1-219
Cow position: chr9:47517055-47517269 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 1-222
Cow position: chr9:54664706-54664925 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 104

Conread position: 1-231
Cow position: chr9:33541910-33542138 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 135, 219

Conread position: 1-241
Cow position: chr9:5342388-5342160 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 83, 46

Conread position: 1-247
Cow position: chr9:25400329-25400099 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 211, 37

Conread position: 1-248
Cow position: chr9:6954395-6954148 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 220

Conread position: 1-249
Cow position: chr9:3356899-3356656 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 150, 202

Conread position: 1-249
Cow position: chr9:9459847-9460075 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 38

Conread position: 1-249
Cow position: chr9:28263374-28263617 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 185, 191

Conread position: 1-249
Cow position: chr9:56032459-56032219 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 66, 57

Conread position: 1-251
Cow position: chr9:29195174-29194921 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 206

Conread position: 1-252
Cow position: chr9:35547123-35547374 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-258
Cow position: chr9:52754994-52754748 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 1-262
Cow position: chr9:52510973-52511227 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 69, 157

Conread position: 1-263
Cow position: chr9:13994017-13994285 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 1-264
Cow position: chr9:9358674-9358927 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 234, 13

Conread position: 1-268
Cow position: chr9:20755901-20755637 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 123

Conread position: 1-270
Cow position: chr9:9311717-9311980 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-270
Cow position: chr9:51717734-51717460 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 42

Conread position: 1-278
Cow position: chr9:55795616-55795889 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 57

Conread position: 1-285
Cow position: chr9:5469727-5469999 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 254, 40

Conread position: 1-285
Cow position: chr9:13744076-13743797 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 204

Conread position: 1-286
Cow position: chr9:31359463-31359737 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 42

Conread position: 1-287
Cow position: chr9:32815510-32815779 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 57

Conread position: 1-287
Cow position: chr9:34410535-34410258 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-288
Cow position: chr9:21460295-21460014 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 1-292
Cow position: chr9:3573322-3573612 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 266, 115

Conread position: 1-293
Cow position: chr9:1756293-1756001 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 67

Conread position: 1-293
Cow position: chr9:18380726-18381002 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 1-293
Cow position: chr9:21030162-21030452 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 202

Conread position: 1-293
Cow position: chr9:25964982-25964687 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 190
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 222

Conread position: 1-293
Cow position: chr9:48730286-48730571 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 146, 127

Conread position: 1-293
Cow position: chr9:52513608-52513309 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 52, 88

Conread position: 1-294
Cow position: chr9:20815724-20816007 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 47, 68

Conread position: 1-294
Cow position: chr9:26102590-26102869 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 262, 74

Conread position: 1-294
Cow position: chr9:48451567-48451842 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 1-295
Cow position: chr9:3185987-3186273 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 1-295
Cow position: chr9:4263231-4262947 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 205, 48

Conread position: 1-295
Cow position: chr9:5327120-5327401 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 1-295
Cow position: chr9:22318219-22318492 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 149, 42

Conread position: 1-295
Cow position: chr9:27279164-27279454 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 1-295
Cow position: chr9:29006417-29006708 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 42

Conread position: 1-295
Cow position: chr9:33219099-33218806 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 38, 118

Conread position: 1-295
Cow position: chr9:33940454-33940750 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 85

Conread position: 1-295
Cow position: chr9:53762557-53762843 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 145, 42

Conread position: 1-295
Cow position: chr9:60395191-60394905 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 1-295
Cow position: chr9:63785051-63784782 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 0

Conread position: 1-296
Cow position: chr9:10905962-10905669 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 208, 273

Conread position: 1-296
Cow position: chr9:18253062-18252775 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 93

Conread position: 1-296
Cow position: chr9:54716759-54716466 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 147

Conread position: 1-297
Cow position: chr9:62471535-62471816 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 197, 0

Conread position: 1-298
Cow position: chr9:15806068-15805777 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 201

Conread position: 1-298
Cow position: chr9:51620302-51620587 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 290, 37

Conread position: 1-299
Cow position: chr9:54411303-54411000 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 191
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 208, 287

Conread position: 1-313
Cow position: chr9:8937006-8937303 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 38, 56

Conread position: 1-313
Cow position: chr9:14975071-14974770 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 208

Conread position: 1-314
Cow position: chr9:20942761-20942449 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 161, 188

Conread position: 1-315
Cow position: chr9:39211469-39211768 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 168, 42

Conread position: 1-315
Cow position: chr9:40303277-40302968 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 159, 48

Conread position: 1-316
Cow position: chr9:1751187-1751496 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 14

Conread position: 1-316
Cow position: chr9:30402571-30402258 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 196

Conread position: 1-316
Cow position: chr9:32019469-32019169 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 205, 119

Conread position: 1-317
Cow position: chr9:4512339-4512650 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 158

Conread position: 1-317
Cow position: chr9:8997415-8997715 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 203
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 201, 0

Conread position: 1-317
Cow position: chr9:20322231-20321942 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 1-317
Cow position: chr9:20901260-20900959 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 159, 42

Conread position: 1-317
Cow position: chr9:22443765-22443459 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 40

Conread position: 1-317
Cow position: chr9:35028309-35028003 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 70

Conread position: 1-317
Cow position: chr9:38615106-38614797 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 42

Conread position: 1-317
Cow position: chr9:40215105-40215406 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 43

Conread position: 1-317
Cow position: chr9:43207520-43207214 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 197

Conread position: 1-317
Cow position: chr9:47591126-47590817 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 201, 0

Conread position: 1-317
Cow position: chr9:52130870-52131184 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 193, 103

Conread position: 1-318
Cow position: chr9:12910542-12910238 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 83, 48

Conread position: 1-318
Cow position: chr9:34697444-34697133 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 133

Conread position: 1-318
Cow position: chr9:53139277-53138967 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 175, 204

Conread position: 1-321
Cow position: chr9:6192599-6192296 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 130, 56

Conread position: 1-321
Cow position: chr9:8919862-8920165 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 203, 42

Conread position: 1-321
Cow position: chr9:11299815-11299524 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-321
Cow position: chr9:12280831-12281136 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 1-321
Cow position: chr9:13670494-13670799 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 42

Conread position: 1-321
Cow position: chr9:15215832-15215515 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 1-321
Cow position: chr9:23388822-23388511 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 129

Conread position: 1-321
Cow position: chr9:26477070-26477383 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 201

Conread position: 1-321
Cow position: chr9:29091628-29091967 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 240

Conread position: 1-321
Cow position: chr9:32307376-32307070 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 1-321
Cow position: chr9:41728118-41728423 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 62, 45

Conread position: 1-321
Cow position: chr9:42061951-42062279 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 202

Conread position: 1-321
Cow position: chr9:42497686-42497996 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 99, 35

Conread position: 1-321
Cow position: chr9:55288031-55287731 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-321
Cow position: chr9:62724400-62724709 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 26

Conread position: 1-322
Cow position: chr9:38792873-38793181 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 106, 68

Conread position: 1-325
Cow position: chr9:6397928-6397608 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 140, 55

Conread position: 1-326
Cow position: chr9:25804686-25805006 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 105, 203

Conread position: 1-326
Cow position: chr9:34958194-34957883 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 1-326
Cow position: chr9:41282870-41283195 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 202

Conread position: 1-326
Cow position: chr9:43623123-43623428 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 202, 0

Conread position: 1-326
Cow position: chr9:49709698-49710010 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 144

Conread position: 1-326
Cow position: chr9:55256691-55256379 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 187, 45

Conread position: 1-329
Cow position: chr9:11123622-11123302 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 42

Conread position: 1-333
Cow position: chr9:6934223-6933893 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 141

Conread position: 1-333
Cow position: chr9:17799493-17799808 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 125, 45

Conread position: 1-333
Cow position: chr9:19034212-19034521 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 322, 133

Conread position: 1-333
Cow position: chr9:28747660-28747344 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 324, 61

Conread position: 1-334
Cow position: chr9:9724021-9723697 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 135

Conread position: 1-334
Cow position: chr9:26085915-26086244 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 57

Conread position: 1-334
Cow position: chr9:34375069-34374751 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 83, 78

Conread position: 1-334
Cow position: chr9:52485054-52484736 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 216, 45

Conread position: 1-335
Cow position: chr9:45141738-45141417 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 83, 42

Conread position: 1-335
Cow position: chr9:58448268-58447940 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 216
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 202, 182

Conread position: 1-336
Cow position: chr9:17872249-17871920 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 322, 47

Conread position: 1-336
Cow position: chr9:22637957-22638284 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 202, 0

Conread position: 1-336
Cow position: chr9:26440957-26440619 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 197, 302

Conread position: 1-336
Cow position: chr9:43048759-43048445 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 134

Conread position: 1-336
Cow position: chr9:44822464-44822121 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 198, 44

Conread position: 1-336
Cow position: chr9:51721029-51720718 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 42

Conread position: 1-336
Cow position: chr9:56088220-56087884 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 207

Conread position: 1-337
Cow position: chr9:9573178-9573517 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 162, 228

Conread position: 1-337
Cow position: chr9:12226127-12225797 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 61

Conread position: 1-337
Cow position: chr9:13169807-13169481 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 90, 55

Conread position: 1-337
Cow position: chr9:31215937-31216274 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 123, 56

Conread position: 1-337
Cow position: chr9:31640470-31640137 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 215
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 318, 221

Conread position: 1-337
Cow position: chr9:36410492-36410171 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 318, 67

Conread position: 1-337
Cow position: chr9:36491046-36490707 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 169

Conread position: 1-337
Cow position: chr9:52638312-52637975 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 299

Conread position: 1-337
Cow position: chr9:53258198-53257873 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 216
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 215, 94

Conread position: 1-340
Cow position: chr9:60080751-60081095 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 105

Conread position: 1-349
Cow position: chr9:9753545-9753193 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 88

Conread position: 1-359
Cow position: chr9:28452311-28451955 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 25

Conread position: 1-436
Cow position: chr9:20579730-20579301 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 302
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 207, 46

Conread position: 2-143
Cow position: chr9:18163498-18163358 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 2-146
Cow position: chr9:60741324-60741180 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 33

Conread position: 2-155
Cow position: chr9:34423477-34423631 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 136, 0

Conread position: 2-157
Cow position: chr9:34917318-34917174 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 2-157
Cow position: chr9:61286620-61286773 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 65

Conread position: 2-158
Cow position: chr9:35466667-35466510 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 2-159
Cow position: chr9:17785710-17785553 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-159
Cow position: chr9:35932955-35932801 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 32

Conread position: 2-167
Cow position: chr9:12773553-12773711 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 47

Conread position: 2-170
Cow position: chr9:20828762-20828926 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 141, 0

Conread position: 2-172
Cow position: chr9:3847254-3847428 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 2-176
Cow position: chr9:12495073-12495246 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 130, 114

Conread position: 2-179
Cow position: chr9:7101293-7101475 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 55, 111

Conread position: 2-179
Cow position: chr9:48282053-48282234 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 103

Conread position: 2-188
Cow position: chr9:53123945-53124131 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-202
Cow position: chr9:9243403-9243595 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 76

Conread position: 2-205
Cow position: chr9:31514076-31513880 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 0

Conread position: 2-208
Cow position: chr9:8992320-8992117 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 89, 40

Conread position: 2-209
Cow position: chr9:55529662-55529859 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 204, 45

Conread position: 2-219
Cow position: chr9:33822975-33823193 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 202, 60

Conread position: 2-231
Cow position: chr9:5110715-5110942 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 60

Conread position: 2-231
Cow position: chr9:33838449-33838229 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 2-239
Cow position: chr9:29819585-29819805 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr9:5164129-5163893 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 0

Conread position: 2-241
Cow position: chr9:8834272-8834038 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 54

Conread position: 2-249
Cow position: chr9:56262250-56262009 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 2-263
Cow position: chr9:23956118-23955870 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 2-266
Cow position: chr9:38941578-38941315 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 198

Conread position: 2-270
Cow position: chr9:46930318-46930579 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 229, 90

Conread position: 2-274
Cow position: chr9:56065425-56065675 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 2-275
Cow position: chr9:3353226-3353476 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 244, 36

Conread position: 2-278
Cow position: chr9:33584825-33584554 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 2-279
Cow position: chr9:9551951-9552222 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 2-285
Cow position: chr9:44396518-44396795 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 269, 167

Conread position: 2-293
Cow position: chr9:42264080-42264350 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 39

Conread position: 2-293
Cow position: chr9:47868883-47869150 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 2-294
Cow position: chr9:16811796-16811516 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 2-294
Cow position: chr9:34286657-34286947 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-295
Cow position: chr9:11309716-11310008 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 200, 183

Conread position: 2-295
Cow position: chr9:31625990-31626292 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 177

Conread position: 2-295
Cow position: chr9:33597832-33598126 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 212

Conread position: 2-296
Cow position: chr9:18216053-18215770 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 73

Conread position: 2-296
Cow position: chr9:33114198-33114493 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 152

Conread position: 2-302
Cow position: chr9:9516889-9516616 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 2-313
Cow position: chr9:6839850-6840163 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 60

Conread position: 2-318
Cow position: chr9:5456313-5456010 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 2-318
Cow position: chr9:50977397-50977082 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 210

Conread position: 2-320
Cow position: chr9:62859540-62859841 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 28

Conread position: 2-321
Cow position: chr9:10010671-10010971 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 2-321
Cow position: chr9:10144626-10144309 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 212
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 145

Conread position: 2-321
Cow position: chr9:22152223-22151916 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-321
Cow position: chr9:26057570-26057273 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 2-321
Cow position: chr9:31346808-31347121 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 46

Conread position: 2-321
Cow position: chr9:55117941-55118246 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 71

Conread position: 2-321
Cow position: chr9:57274077-57274399 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 199, 16

Conread position: 2-328
Cow position: chr9:38846482-38846166 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 149

Conread position: 2-333
Cow position: chr9:18425768-18426098 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 142, 132

Conread position: 2-334
Cow position: chr9:8723654-8723973 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 55

Conread position: 2-336
Cow position: chr9:3070558-3070236 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 100

Conread position: 2-336
Cow position: chr9:9596091-9595771 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 134, 44

Conread position: 2-337
Cow position: chr9:8547667-8548000 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 131, 54

Conread position: 2-338
Cow position: chr9:28726870-28726535 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 57

Conread position: 2-378
Cow position: chr9:30123789-30124150 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 304, 35

Conread position: 3-132
Cow position: chr9:19657117-19656990 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 3-153
Cow position: chr9:17027059-17027204 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 45

Conread position: 3-159
Cow position: chr9:36634364-36634520 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 98

Conread position: 3-164
Cow position: chr9:53061513-53061680 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 3-165
Cow position: chr9:16115745-16115589 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 3-166
Cow position: chr9:7543400-7543239 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 118, 40

Conread position: 3-168
Cow position: chr9:6446964-6447130 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 3-168
Cow position: chr9:28718577-28718734 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 3-170
Cow position: chr9:54598530-54598697 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-172
Cow position: chr9:1884281-1884104 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 3-172
Cow position: chr9:35295555-35295716 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 3-172
Cow position: chr9:59586175-59586337 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 3-175
Cow position: chr9:22804109-22803942 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 93

Conread position: 3-187
Cow position: chr9:20319189-20319014 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 3-189
Cow position: chr9:36457856-36458044 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 161, 0

Conread position: 3-194
Cow position: chr9:27345729-27345536 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 79

Conread position: 3-200
Cow position: chr9:44759067-44758878 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 3-201
Cow position: chr9:35049340-35049528 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 48

Conread position: 3-204
Cow position: chr9:63169829-63170030 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 67, 77

Conread position: 3-218
Cow position: chr9:52030336-52030548 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 3-226
Cow position: chr9:32955834-32955608 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 22

Conread position: 3-241
Cow position: chr9:23632805-23632568 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 88

Conread position: 3-241
Cow position: chr9:35832757-35832524 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 3-245
Cow position: chr9:34279199-34278959 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 80, 140

Conread position: 3-266
Cow position: chr9:21080430-21080679 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 3-268
Cow position: chr9:39709713-39709963 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 197

Conread position: 3-268
Cow position: chr9:45728639-45728897 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 3-270
Cow position: chr9:5900094-5899841 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 44

Conread position: 3-279
Cow position: chr9:4629969-4630234 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 3-285
Cow position: chr9:55438572-55438289 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 199, 39

Conread position: 3-286
Cow position: chr9:6189503-6189235 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 3-290
Cow position: chr9:53281347-53281054 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 71

Conread position: 3-293
Cow position: chr9:34902237-34901969 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 3-295
Cow position: chr9:34283813-34284093 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 55

Conread position: 3-295
Cow position: chr9:38624767-38624484 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 187

Conread position: 3-295
Cow position: chr9:63896406-63896681 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 203, 27

Conread position: 3-295
Cow position: chr9:64637412-64637690 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 27

Conread position: 3-297
Cow position: chr9:32670089-32669800 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 3-298
Cow position: chr9:39011610-39011327 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 217, 55

Conread position: 3-301
Cow position: chr9:43757401-43757689 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 154, 55

Conread position: 3-309
Cow position: chr9:40005334-40005636 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 65

Conread position: 3-315
Cow position: chr9:11304229-11303917 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 154

Conread position: 3-316
Cow position: chr9:35167026-35167334 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 205

Conread position: 3-317
Cow position: chr9:647634-647938 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 198, 217

Conread position: 3-317
Cow position: chr9:32676534-32676845 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 97

Conread position: 3-317
Cow position: chr9:37016759-37017047 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 24

Conread position: 3-318
Cow position: chr9:9815270-9815579 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 152

Conread position: 3-318
Cow position: chr9:33120031-33119722 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 191, 206

Conread position: 3-321
Cow position: chr9:16300717-16300399 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 70

Conread position: 3-321
Cow position: chr9:20090919-20091208 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 157, 40

Conread position: 3-321
Cow position: chr9:26403655-26403952 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 3-321
Cow position: chr9:30137983-30138295 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 158, 40

Conread position: 3-321
Cow position: chr9:48563938-48564249 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 132, 54

Conread position: 3-321
Cow position: chr9:50202414-50202736 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 215

Conread position: 3-321
Cow position: chr9:51566638-51566315 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 204

Conread position: 3-321
Cow position: chr9:58979265-58979564 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 28, 78

Conread position: 3-326
Cow position: chr9:24887065-24887372 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 59

Conread position: 3-336
Cow position: chr9:6338650-6338979 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 199, 218

Conread position: 3-336
Cow position: chr9:31557870-31557543 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 22

Conread position: 3-337
Cow position: chr9:8998213-8998540 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 15

Conread position: 3-345
Cow position: chr9:8901369-8901034 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 71

Conread position: 4-157
Cow position: chr9:48900979-48900825 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 46

Conread position: 4-188
Cow position: chr9:4181691-4181507 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-201
Cow position: chr9:52763895-52763705 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 4-201
Cow position: chr9:64629502-64629310 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 4-212
Cow position: chr9:44584462-44584659 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 4-237
Cow position: chr9:24652260-24652499 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 72

Conread position: 4-313
Cow position: chr9:5836006-5836318 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 85, 39

Conread position: 4-318
Cow position: chr9:9403314-9403012 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 80, 49

Conread position: 4-318
Cow position: chr9:61302864-61303167 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 214, 41

Conread position: 4-336
Cow position: chr9:20416653-20416332 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 148

Conread position: 4-336
Cow position: chr9:52505448-52505126 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 215
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 268, 169

Conread position: 4-349
Cow position: chr9:20847802-20848138 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 192, 38

Conread position: 5-155
Cow position: chr9:20017259-20017407 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 5-195
Cow position: chr9:38866122-38865934 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 5-196
Cow position: chr9:21292545-21292357 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 149, 38

Conread position: 5-203
Cow position: chr9:7859776-7859580 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 100

Conread position: 5-204
Cow position: chr9:44624509-44624317 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 5-207
Cow position: chr9:12786614-12786412 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 5-207
Cow position: chr9:41964870-41964673 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 197, 13

Conread position: 5-260
Cow position: chr9:17677251-17677003 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 197, 0

Conread position: 5-264
Cow position: chr9:50310901-50310659 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 5-271
Cow position: chr9:25583691-25583952 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 5-283
Cow position: chr9:8636538-8636803 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 31

Conread position: 5-287
Cow position: chr9:32853799-32853502 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 0

Conread position: 5-292
Cow position: chr9:1878136-1877863 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 267, 28

Conread position: 5-293
Cow position: chr9:47906428-47906137 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 95

Conread position: 5-295
Cow position: chr9:5263364-5263646 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 5-298
Cow position: chr9:49764507-49764805 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 55

Conread position: 5-317
Cow position: chr9:52407030-52407332 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 5-336
Cow position: chr9:1370794-1371119 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 55

Conread position: 5-336
Cow position: chr9:44709692-44710006 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 5-337
Cow position: chr9:35128338-35128680 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 155, 305

Conread position: 5-353
Cow position: chr9:49374048-49374390 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 226
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 312, 56

Conread position: 6-119
Cow position: chr9:35360429-35360316 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-140
Cow position: chr9:1443757-1443623 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-337
Cow position: chr9:62150974-62151286 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 216
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 314, 12

Conread position: 7-173
Cow position: chr9:8467920-8468083 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 7-218
Cow position: chr9:52258202-52257995 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 125

Conread position: 7-273
Cow position: chr9:31648078-31648341 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 24

Conread position: 7-288
Cow position: chr9:26279308-26279033 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 7-317
Cow position: chr9:46981360-46981073 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 152, 36

Conread position: 7-326
Cow position: chr9:54681384-54681677 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 7-333
Cow position: chr9:29185276-29184952 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 291

Conread position: 7-337
Cow position: chr9:31125067-31124742 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 163, 40

Conread position: 8-156
Cow position: chr9:44093220-44093072 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-201
Cow position: chr9:56827338-56827536 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 147, 0

Conread position: 8-295
Cow position: chr9:17741076-17740802 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 38

Conread position: 8-317
Cow position: chr9:52619511-52619811 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 141

Conread position: 8-321
Cow position: chr9:30477907-30477614 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 41

Conread position: 8-328
Cow position: chr9:44834100-44833788 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 193, 71

Conread position: 11-158
Cow position: chr9:34196060-34196202 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 57

Conread position: 11-189
Cow position: chr9:32089251-32089432 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 11-240
Cow position: chr9:58662111-58662329 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 11-266
Cow position: chr9:54493006-54493254 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 30

Conread position: 11-290
Cow position: chr9:11969052-11969328 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 205, 68

Conread position: 11-317
Cow position: chr9:47446150-47445864 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 11-318
Cow position: chr9:22408625-22408916 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 110, 46

Conread position: 11-318
Cow position: chr9:56011371-56011657 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 35

Conread position: 11-322
Cow position: chr9:42446127-42445811 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 221

Conread position: 11-322
Cow position: chr9:52267894-52267588 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 133

Conread position: 11-326
Cow position: chr9:9443743-9443425 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 153

Conread position: 11-333
Cow position: chr9:7409638-7409963 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 27

Conread position: 11-334
Cow position: chr9:41513505-41513804 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 11-336
Cow position: chr9:40543449-40543141 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 211, 51

Conread position: 11-348
Cow position: chr9:11168604-11168927 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 32

Conread position: 12-299
Cow position: chr9:52840014-52839736 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 31, 13

Conread position: 14-286
Cow position: chr9:6596354-6596098 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 15-295
Cow position: chr9:41394778-41394509 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 188, 0

Conread position: 17-175
Cow position: chr9:6118566-6118409 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 60

Conread position: 17-296
Cow position: chr9:22434057-22433794 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 213, 142

Conread position: 17-318
Cow position: chr9:23261305-23261597 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 18-264
Cow position: chr9:50125724-50125479 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 186

Conread position: 18-317
Cow position: chr9:48118810-48118534 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 86

Conread position: 18-336
Cow position: chr9:48107236-48106937 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 19-255
Cow position: chr9:5650093-5649869 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 19-321
Cow position: chr9:1729801-1729506 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 214

Conread position: 20-199
Cow position: chr9:25375860-25375683 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 20-339
Cow position: chr9:63153941-63153628 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 179

Conread position: 22-301
Cow position: chr9:823838-824112 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 271, 77

Conread position: 22-321
Cow position: chr9:9416517-9416236 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 20

Conread position: 26-295
Cow position: chr9:61544542-61544794 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 26-329
Cow position: chr9:29840786-29841064 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 287, 31

Conread position: 30-321
Cow position: chr9:19555266-19555541 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 283, 17

Conread position: 30-334
Cow position: chr9:4646435-4646147 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 230, 35

Conread position: 30-337
Cow position: chr9:33237279-33237576 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 273, 73

Conread position: 37-262
Cow position: chr9:45171337-45171106 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 38-288
Cow position: chr9:28983071-28983323 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 73

Conread position: 39-192
Cow position: chr9:24243830-24243675 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 39-195
Cow position: chr9:54051669-54051823 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 93

Conread position: 39-201
Cow position: chr9:5072939-5072783 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 39-261
Cow position: chr9:35889337-35889121 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 0

Conread position: 39-263
Cow position: chr9:46664718-46664935 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 110

Conread position: 39-287
Cow position: chr9:28392133-28391898 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 164

Conread position: 39-295
Cow position: chr9:50543532-50543277 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 20

Conread position: 39-317
Cow position: chr9:21888063-21888332 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 39-321
Cow position: chr9:8562715-8563004 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 151, 102

Conread position: 39-321
Cow position: chr9:9654414-9654145 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 39-333
Cow position: chr9:36445509-36445804 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 36, 20

Conread position: 39-334
Cow position: chr9:1520846-1520553 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 82, 40

Conread position: 39-336
Cow position: chr9:33092853-33093135 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 45, 27

Conread position: 39-337
Cow position: chr9:8288511-8288801 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 293, 83

Conread position: 39-337
Cow position: chr9:11319739-11319449 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 20

Conread position: 40-257
Cow position: chr9:18828160-18827947 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 173, 0

Conread position: 40-317
Cow position: chr9:37677788-37678050 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 0

Conread position: 41-240
Cow position: chr9:43342226-43342420 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 137, 0

Conread position: 42-326
Cow position: chr9:61997705-61997425 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 16

Conread position: 43-295
Cow position: chr9:62668147-62668396 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 36

Conread position: 44-188
Cow position: chr9:55354509-55354653 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 44-294
Cow position: chr9:62442188-62442435 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 57

Conread position: 44-316
Cow position: chr9:33681557-33681846 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 114, 277

Conread position: 44-321
Cow position: chr9:8534798-8534518 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 172

Conread position: 44-321
Cow position: chr9:50139185-50139452 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 14

Conread position: 45-260
Cow position: chr9:28378867-28379080 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 196, 110

Conread position: 45-298
Cow position: chr9:10819929-10819684 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 119, 0

Conread position: 46-318
Cow position: chr9:55084401-55084133 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 76

Conread position: 49-183
Cow position: chr9:16528950-16528814 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 49-248
Cow position: chr9:41781557-41781752 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 161, 0

Conread position: 49-251
Cow position: chr9:60110153-60110351 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 49-316
Cow position: chr9:14796867-14796611 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 192, 141

Conread position: 49-317
Cow position: chr9:28354420-28354681 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 155

Conread position: 49-318
Cow position: chr9:3738321-3738058 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 51

Conread position: 49-326
Cow position: chr9:31079176-31078911 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 35, 25

Conread position: 49-334
Cow position: chr9:50081137-50080865 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 154

Conread position: 50-170
Cow position: chr9:18003286-18003167 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 61

Conread position: 50-175
Cow position: chr9:34135621-34135745 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 50-200
Cow position: chr9:34888390-34888244 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 50-206
Cow position: chr9:33347586-33347430 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 34, 23

Conread position: 50-244
Cow position: chr9:23797139-23797331 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 155

Conread position: 50-247
Cow position: chr9:64064459-64064259 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 148, 0

Conread position: 50-265
Cow position: chr9:38645440-38645227 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 88, 71

Conread position: 50-268
Cow position: chr9:52598817-52598605 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 151, 0

Conread position: 50-295
Cow position: chr9:17411289-17411047 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 50-296
Cow position: chr9:23264898-23265140 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 161, 68

Conread position: 50-298
Cow position: chr9:64559978-64559736 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 50-317
Cow position: chr9:17518585-17518326 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 50-321
Cow position: chr9:11313610-11313343 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 44, 155

Conread position: 50-321
Cow position: chr9:64091583-64091851 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 35, 153

Conread position: 50-326
Cow position: chr9:5594406-5594674 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 50-327
Cow position: chr9:35105886-35105608 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 154

Conread position: 50-333
Cow position: chr9:54528418-54528692 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 95, 0

Conread position: 50-336
Cow position: chr9:18217195-18216923 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 51-184
Cow position: chr9:35793582-35793715 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 51-256
Cow position: chr9:31772172-31771976 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 51-321
Cow position: chr9:10650394-10650136 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 65, 0

Conread position: 51-328
Cow position: chr9:22696128-22696397 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 51-336
Cow position: chr9:30652806-30652520 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 80

Conread position: 51-336
Cow position: chr9:44467435-44467172 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 20, 114

Conread position: 51-337
Cow position: chr9:64050656-64050370 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 140

Conread position: 51-351
Cow position: chr9:31638752-31638442 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 85

Conread position: 52-318
Cow position: chr9:40542042-40542283 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 52-339
Cow position: chr9:5500758-5501044 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 19, 247

Conread position: 53-339
Cow position: chr9:5245760-5246042 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 42, 48

Conread position: 54-300
Cow position: chr9:5209490-5209731 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 14, 26

Conread position: 54-337
Cow position: chr9:34468670-34468395 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 16

Conread position: 58-266
Cow position: chr9:19902994-19903196 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 145, 0

Conread position: 58-295
Cow position: chr9:29684057-29684293 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 134, 16

Conread position: 58-300
Cow position: chr9:5219260-5219018 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 90, 163

Conread position: 59-193
Cow position: chr9:34014336-34014202 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 59-263
Cow position: chr9:23788352-23788551 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 59-268
Cow position: chr9:3343662-3343861 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 0

Conread position: 59-269
Cow position: chr9:62459280-62459488 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 59-295
Cow position: chr9:8337940-8338172 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 155, 0

Conread position: 59-295
Cow position: chr9:19713993-19714220 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 144, 0

Conread position: 59-295
Cow position: chr9:28686301-28686537 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 42

Conread position: 59-298
Cow position: chr9:33696949-33697176 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 59-316
Cow position: chr9:4861297-4861550 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 42

Conread position: 59-317
Cow position: chr9:6852154-6851905 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 0

Conread position: 59-318
Cow position: chr9:43870888-43871143 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 59-321
Cow position: chr9:7634184-7634440 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 153, 0

Conread position: 59-321
Cow position: chr9:55075215-55074963 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 87, 0

Conread position: 59-328
Cow position: chr9:31814473-31814197 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 20

Conread position: 59-334
Cow position: chr9:42478569-42478285 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 174, 144

Conread position: 59-336
Cow position: chr9:43443717-43443978 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 83

Conread position: 59-339
Cow position: chr9:9406140-9405859 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 25, 15

Conread position: 60-333
Cow position: chr9:5763716-5763453 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 260, 14

Conread position: 61-197
Cow position: chr9:25627999-25628135 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 123

Conread position: 61-222
Cow position: chr9:5665981-5666139 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 61-317
Cow position: chr9:3774080-3774327 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 69, 0

Conread position: 61-321
Cow position: chr9:1972863-1973109 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 80, 0

Conread position: 61-321
Cow position: chr9:38961513-38961267 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 61-321
Cow position: chr9:39681254-39681516 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 233, 142

Conread position: 61-326
Cow position: chr9:63745730-63745985 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 62-189
Cow position: chr9:60355298-60355169 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 62-258
Cow position: chr9:4580488-4580301 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 141, 0

Conread position: 62-292
Cow position: chr9:5399051-5399280 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 80, 149

Conread position: 62-294
Cow position: chr9:1867367-1867594 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 117, 0

Conread position: 62-295
Cow position: chr9:25921739-25921973 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 38

Conread position: 62-295
Cow position: chr9:50075980-50076203 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 62-295
Cow position: chr9:62656720-62656943 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 68, 9

Conread position: 62-316
Cow position: chr9:4858451-4858704 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 126

Conread position: 62-318
Cow position: chr9:9461738-9461491 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 62-318
Cow position: chr9:37069643-37069405 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 142

Conread position: 62-321
Cow position: chr9:17310645-17310388 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 17

Conread position: 62-334
Cow position: chr9:55321553-55321818 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 34, 39

Conread position: 63-202
Cow position: chr9:13846210-13846071 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 63-207
Cow position: chr9:39758435-39758579 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 63-293
Cow position: chr9:45756280-45756504 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 139, 158

Conread position: 63-336
Cow position: chr9:5433549-5433820 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 236

Conread position: 63-338
Cow position: chr9:389100-388827 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 95

Conread position: 65-241
Cow position: chr9:38289404-38289233 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 82

Conread position: 65-321
Cow position: chr9:32732760-32732518 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 65-321
Cow position: chr9:55889734-55889974 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 66-293
Cow position: chr9:15225376-15225155 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 136, 0

Conread position: 69-186
Cow position: chr9:29792304-29792186 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 69-334
Cow position: chr9:7362951-7363206 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 261, 69

Conread position: 70-197
Cow position: chr9:39135707-39135577 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 70-257
Cow position: chr9:55532738-55532922 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 70-295
Cow position: chr9:59386845-59386630 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 134, 0

Conread position: 70-316
Cow position: chr9:3220060-3220300 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 128, 0

Conread position: 70-318
Cow position: chr9:49293219-49292982 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 31

Conread position: 70-321
Cow position: chr9:5509650-5509888 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 71-252
Cow position: chr9:42298117-42298286 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 71-295
Cow position: chr9:19493541-19493317 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 151

Conread position: 71-321
Cow position: chr9:24872761-24872998 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 137, 69

Conread position: 72-286
Cow position: chr9:26310432-26310639 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 147, 0

Conread position: 72-326
Cow position: chr9:32371826-32371589 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 53

Conread position: 73-326
Cow position: chr9:49416914-49417159 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 130, 0

Conread position: 74-259
Cow position: chr9:28754744-28754929 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 134

Conread position: 74-321
Cow position: chr9:44915170-44914921 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 9, 113

Conread position: 75-294
Cow position: chr9:43936874-43937084 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 104

Conread position: 75-295
Cow position: chr9:51557557-51557353 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 75-336
Cow position: chr9:41679675-41679926 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 128

Conread position: 78-257
Cow position: chr9:40776729-40776905 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 23

Conread position: 81-315
Cow position: chr9:35375360-35375589 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 46

Conread position: 82-290
Cow position: chr9:41486306-41486100 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 82-333
Cow position: chr9:1949853-1950097 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 82, 126

Conread position: 86-326
Cow position: chr9:39577679-39577909 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 86-337
Cow position: chr9:24997577-24997337 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 237, 38

Conread position: 87-285
Cow position: chr9:53326810-53326615 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 85

Conread position: 87-315
Cow position: chr9:29191288-29191506 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 119

Conread position: 88-321
Cow position: chr9:9823564-9823339 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 109, 78

Conread position: 89-334
Cow position: chr9:5227229-5226987 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 69

Conread position: 90-336
Cow position: chr9:20989514-20989273 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 121

Conread position: 92-246
Cow position: chr9:48100742-48100894 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 93-317
Cow position: chr9:22114688-22114472 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 116, 64

Conread position: 95-295
Cow position: chr9:17928707-17928905 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 95-295
Cow position: chr9:35904796-35904600 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 108, 0

Conread position: 98-291
Cow position: chr9:8306806-8306993 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 147, 105

Conread position: 98-295
Cow position: chr9:25546592-25546783 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 105, 0

Conread position: 99-295
Cow position: chr9:11068518-11068326 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 66

Conread position: 100-317
Cow position: chr9:27029751-27029541 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 164, 102

Conread position: 100-317
Cow position: chr9:47500258-47500044 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 112

Conread position: 101-295
Cow position: chr9:53211536-53211349 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 105-333
Cow position: chr9:27697769-27697549 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 95

Conread position: 105-339
Cow position: chr9:41789243-41789476 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 196, 97

Conread position: 107-293
Cow position: chr9:48727402-48727223 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 21

Conread position: 107-321
Cow position: chr9:47472647-47472860 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 35

Conread position: 107-337
Cow position: chr9:1916248-1916472 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 212, 96

Conread position: 109-274
Cow position: chr9:16121131-16121296 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 93

Conread position: 109-295
Cow position: chr9:35849867-35850045 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 109-317
Cow position: chr9:6089052-6089261 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 7

Conread position: 110-288
Cow position: chr9:43013686-43013862 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 110-295
Cow position: chr9:11377979-11377796 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 179, 45

Conread position: 112-321
Cow position: chr9:62134658-62134453 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 146, 30

Conread position: 113-315
Cow position: chr9:30162123-30162320 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 0

Conread position: 116-338
Cow position: chr9:38343860-38344076 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 204, 25

Conread position: 122-334
Cow position: chr9:3387665-3387872 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 210, 81

Conread position: 123-321
Cow position: chr9:41853409-41853609 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 84

Conread position: 125-321
Cow position: chr9:35533974-35533783 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 190, 74

Conread position: 125-386
Cow position: chr9:3371546-3371805 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 76

Conread position: 128-318
Cow position: chr9:1952288-1952105 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 129-336
Cow position: chr9:50703128-50702935 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 133-317
Cow position: chr9:6225468-6225289 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 77, 0

Conread position: 134-321
Cow position: chr9:33038473-33038295 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 24

Conread position: 136-321
Cow position: chr9:18163170-18162989 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 115

Conread position: 139-337
Cow position: chr9:32710922-32711115 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 175, 64

Conread position: 140-316
Cow position: chr9:26390764-26390930 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 142-336
Cow position: chr9:5531938-5532130 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 22, 63

Conread position: 142-337
Cow position: chr9:31270775-31270962 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 66

Conread position: 145-321
Cow position: chr9:8524841-8525003 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 25

Conread position: 149-295
Cow position: chr9:34919257-34919117 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 40

Conread position: 149-337
Cow position: chr9:1997140-1997323 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 53

Conread position: 150-295
Cow position: chr9:9090361-9090218 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 150-318
Cow position: chr9:10092390-10092222 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 147, 54

Conread position: 153-295
Cow position: chr9:29035029-29034885 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 157-336
Cow position: chr9:20738707-20738889 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 68

Conread position: 161-316
Cow position: chr9:59172368-59172217 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 42

Conread position: 162-321
Cow position: chr9:34000604-34000453 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 162-321
Cow position: chr9:40603961-40604115 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 162-336
Cow position: chr9:37000045-36999880 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 162-337
Cow position: chr9:4324141-4323974 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 168, 41

Conread position: 163-321
Cow position: chr9:50667438-50667591 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 41

Conread position: 164-321
Cow position: chr9:18002936-18002782 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 164-321
Cow position: chr9:64517081-64516932 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 172-321
Cow position: chr9:35306092-35305949 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 186-334
Cow position: chr9:42998431-42998286 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 146, 111

Show alignments to all cow chromosomes.