Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-122
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-133
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 1-139
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 1-150
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 28

Conread position: 1-157
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 76

Conread position: 1-157
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 134

Conread position: 1-162
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 72

Conread position: 1-168
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 1-183
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 69

Conread position: 1-186
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 22

Conread position: 1-190
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 32, 20

Conread position: 1-190
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 25

Conread position: 1-191
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 67

Conread position: 1-194
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 169

Conread position: 1-194
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 78

Conread position: 1-195
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 20

Conread position: 1-196
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 56

Conread position: 1-196
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 68

Conread position: 1-196
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 29, 171

Conread position: 1-196
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 19, 73

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 130

Conread position: 1-197
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 166
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 19

Conread position: 1-197
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 1-197
Cow position:
Alignm length: 209
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 1-197
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 137

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 19

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 138

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 61

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 58

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 100

Conread position: 1-198
Cow position:
Alignm length: 206
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 157

Conread position: 1-211
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 1-232
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 140, 21

Conread position: 1-234
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 2-177
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 12

Conread position: 2-197
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 72

Conread position: 2-197
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 45

Conread position: 2-197
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 2-197
Cow position:
Alignm length: 199
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 69

Conread position: 2-197
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 27, 0

Conread position: 2-214
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 7

Conread position: 3-194
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 89

Conread position: 4-139
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 4-179
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 137, 19

Conread position: 4-195
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 65, 22

Conread position: 4-197
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 106

Conread position: 4-197
Cow position:
Alignm length: 200
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 4-197
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 130, 17

Conread position: 5-137
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 5-189
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 64, 16

Conread position: 5-195
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 64, 18

Conread position: 5-195
Cow position:
Alignm length: 199
Alignm identity: 161
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 64, 16

Conread position: 5-197
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 23

Conread position: 5-199
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 18

Conread position: 6-147
Cow position:
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 6-196
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 9

Conread position: 7-144
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 7-197
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 7-214
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 9-197
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 31

Conread position: 10-195
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 90, 58

Conread position: 10-195
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 19, 11

Conread position: 10-195
Cow position:
Alignm length: 194
Alignm identity: 154
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 0

Conread position: 10-196
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 75

Conread position: 10-196
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 10-197
Cow position:
Alignm length: 195
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 53

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 131, 58

Conread position: 10-197
Cow position:
Alignm length: 196
Alignm identity: 161
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 102

Conread position: 10-197
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 90

Conread position: 10-197
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 10-197
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 23, 11

Conread position: 10-197
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 10-197
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 11

Conread position: 10-211
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 14, 61

Conread position: 10-238
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 11, 45

Conread position: 11-178
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 10

Conread position: 11-185
Cow position:
Alignm length: 178
Alignm identity: 147
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 58, 12

Conread position: 11-197
Cow position:
Alignm length: 193
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 21

Conread position: 11-197
Cow position:
Alignm length: 189
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 31

Conread position: 11-197
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 40

Conread position: 11-197
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 172

Conread position: 11-197
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 57

Conread position: 11-197
Cow position:
Alignm length: 194
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 63

Conread position: 12-195
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 87, 16

Conread position: 12-197
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 125

Conread position: 12-197
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 12-197
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 129, 55

Conread position: 12-273
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 18

Conread position: 15-193
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 15-197
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 15-197
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 106

Conread position: 15-198
Cow position:
Alignm length: 193
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 60, 15

Conread position: 16-196
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 16-197
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 25

Conread position: 16-197
Cow position:
Alignm length: 189
Alignm identity: 154
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 6, 105

Conread position: 16-197
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 16-197
Cow position:
Alignm length: 186
Alignm identity: 149
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 10

Conread position: 16-197
Cow position:
Alignm length: 188
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 16-197
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 16-212
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 125, 25

Conread position: 17-197
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 53, 88

Conread position: 18-196
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 120

Conread position: 18-197
Cow position:
Alignm length: 188
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 10

Conread position: 18-211
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 68

Conread position: 19-166
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 28

Conread position: 21-197
Cow position:
Alignm length: 186
Alignm identity: 150
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 48, 151

Conread position: 21-197
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 22-197
Cow position:
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 79, 46

Conread position: 22-197
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 59

Conread position: 22-197
Cow position:
Alignm length: 183
Alignm identity: 151
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 47, 72

Conread position: 23-197
Cow position:
Alignm length: 178
Alignm identity: 147
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 48, 109

Conread position: 23-197
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 25-197
Cow position:
Alignm length: 177
Alignm identity: 143
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 46, 136

Conread position: 28-198
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 91, 37

Conread position: 31-194
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 31-197
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 32-196
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 101

Conread position: 32-196
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 37, 64

Conread position: 32-197
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 33-162
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 33

Conread position: 44-197
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 116

Conread position: 44-199
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 108

Conread position: 45-197
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 42

Conread position: 45-223
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 11

Conread position: 57-197
Cow position:
Alignm length: 148
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 65-197
Cow position:
Alignm length: 138
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 68-197
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 69-196
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 84-197
Cow position:
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 10

Conread position: 85-197
Cow position:
Alignm length: 118
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 92-197
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 93-197
Cow position:
Alignm length: 106
Alignm identity: 94
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 63

Conread position: 94-197
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.