Cow genome map
| Conread name: | rret16_g12.y1 |
| Conread position: | 1-122 |
| Cow position: | chr11:69075887-69075756 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-133 |
| Cow position: | chr11:48296009-48295869 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-139 |
| Cow position: | chr11:70741002-70741147 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-150 |
| Cow position: | chr11:75918309-75918162 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 28 |
| Conread position: | 1-157 |
| Cow position: | chr11:34646565-34646403 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 1-157 |
| Cow position: | chr11:57170854-57171015 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 1-162 |
| Cow position: | chr11:48496621-48496775 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 1-168 |
| Cow position: | chr11:47851002-47850826 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-183 |
| Cow position: | chr11:18373051-18372862 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 1-186 |
| Cow position: | chr11:26535748-26535556 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 1-190 |
| Cow position: | chr11:17661066-17660872 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 1-190 |
| Cow position: | chr11:55052847-55052653 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 1-191 |
| Cow position: | chr11:19500813-19501001 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 1-194 |
| Cow position: | chr11:25387042-25386844 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 169 |
| Conread position: | 1-194 |
| Cow position: | chr11:29960274-29960078 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 78 |
| Conread position: | 1-195 |
| Cow position: | chr11:50197457-50197672 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 1-196 |
| Cow position: | chr11:6154385-6154183 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 1-196 |
| Cow position: | chr11:15632578-15632788 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 1-196 |
| Cow position: | chr11:18591458-18591662 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 29, 171 |
| Conread position: | 1-196 |
| Cow position: | chr11:27248469-27248263 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:7590168-7589961 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:16251268-16251478 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:17968606-17968805 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 1-197 |
| Cow position: | chr11:18706839-18707043 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 1-197 |
| Cow position: | chr11:25320032-25319821 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:35684525-35684727 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 1-197 |
| Cow position: | chr11:38810372-38810580 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:39115471-39115264 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:42792997-42793205 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:46580333-46580137 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 1-197 |
| Cow position: | chr11:47899244-47899047 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 1-197 |
| Cow position: | chr11:52380896-52381100 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 1-197 |
| Cow position: | chr11:55333885-55333679 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-197 |
| Cow position: | chr11:62749780-62749980 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 1-197 |
| Cow position: | chr11:80820027-80820228 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 1-197 |
| Cow position: | chr11:85764911-85764722 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 1-198 |
| Cow position: | chr11:2917610-2917810 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 157 |
| Conread position: | 1-211 |
| Cow position: | chr11:20761823-20761600 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-232 |
| Cow position: | chr11:30912026-30912259 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 140, 21 |
| Conread position: | 1-234 |
| Cow position: | chr11:81174862-81174621 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-177 |
| Cow position: | chr11:70114439-70114263 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 2-197 |
| Cow position: | chr11:3833383-3833577 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 2-197 |
| Cow position: | chr11:11469666-11469863 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 2-197 |
| Cow position: | chr11:18210373-18210578 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-197 |
| Cow position: | chr11:37068342-37068533 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 69 |
| Conread position: | 2-197 |
| Cow position: | chr11:48932612-48932813 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-214 |
| Cow position: | chr11:67550403-67550608 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 3-194 |
| Cow position: | chr11:44234323-44234128 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 4-139 |
| Cow position: | chr11:85986199-85986340 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 4-179 |
| Cow position: | chr11:1599345-1599175 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 137, 19 |
| Conread position: | 4-195 |
| Cow position: | chr11:50778341-50778143 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 4-197 |
| Cow position: | chr11:24937638-24937432 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 4-197 |
| Cow position: | chr11:25165413-25165214 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 4-197 |
| Cow position: | chr11:34121161-34120968 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 5-137 |
| Cow position: | chr11:40478881-40479022 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 5-189 |
| Cow position: | chr11:2925324-2925512 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 5-195 |
| Cow position: | chr11:20238638-20238445 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 5-195 |
| Cow position: | chr11:47545096-47544900 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 5-197 |
| Cow position: | chr11:80923359-80923564 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 64, 23 |
| Conread position: | 5-199 |
| Cow position: | chr11:2907551-2907754 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 6-147 |
| Cow position: | chr11:30954966-30954820 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 6-196 |
| Cow position: | chr11:34413064-34412868 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 7-144 |
| Cow position: | chr11:30830649-30830791 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-197 |
| Cow position: | chr11:52297254-52297453 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-214 |
| Cow position: | chr11:44036689-44036469 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 9-197 |
| Cow position: | chr11:47165177-47165367 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 10-195 |
| Cow position: | chr11:42083435-42083252 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 90, 58 |
| Conread position: | 10-195 |
| Cow position: | chr11:63516790-63516596 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 10-195 |
| Cow position: | chr11:71846383-71846576 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 10-196 |
| Cow position: | chr11:9221763-9221954 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 10-196 |
| Cow position: | chr11:66424916-66425119 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 10-197 |
| Cow position: | chr11:1849208-1849395 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 10-197 |
| Cow position: | chr11:18588623-18588810 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 131, 58 |
| Conread position: | 10-197 |
| Cow position: | chr11:33341182-33341375 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 10-197 |
| Cow position: | chr11:35153861-35154057 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 10-197 |
| Cow position: | chr11:36658856-36659042 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 90 |
| Conread position: | 10-197 |
| Cow position: | chr11:50152851-50153048 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 10-197 |
| Cow position: | chr11:59155914-59156101 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 10-197 |
| Cow position: | chr11:62979453-62979248 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 10-197 |
| Cow position: | chr11:71455756-71455558 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 10-211 |
| Cow position: | chr11:2092299-2092095 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 10-238 |
| Cow position: | chr11:62239708-62239480 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 11-178 |
| Cow position: | chr11:36286657-36286488 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 11-185 |
| Cow position: | chr11:65762641-65762814 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 147 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 11-197 |
| Cow position: | chr11:8840785-8840970 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 11-197 |
| Cow position: | chr11:21728315-21728497 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 11-197 |
| Cow position: | chr11:21844170-21844365 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 11-197 |
| Cow position: | chr11:28644049-28643852 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 8, 172 |
| Conread position: | 11-197 |
| Cow position: | chr11:56728910-56728717 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 91, 57 |
| Conread position: | 11-197 |
| Cow position: | chr11:69119255-69119070 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 12-195 |
| Cow position: | chr11:42519696-42519514 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 12-197 |
| Cow position: | chr11:36496806-36496624 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 12-197 |
| Cow position: | chr11:43360821-43361026 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 12-197 |
| Cow position: | chr11:64334812-64334628 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 129, 55 |
| Conread position: | 12-273 |
| Cow position: | chr11:30192135-30191865 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 11, 18 |
| Conread position: | 15-193 |
| Cow position: | chr11:48544389-48544217 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 15-197 |
| Cow position: | chr11:8428468-8428265 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 15-197 |
| Cow position: | chr11:10213608-10213797 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 15-198 |
| Cow position: | chr11:31352612-31352803 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 16-196 |
| Cow position: | chr11:74316670-74316477 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 16-197 |
| Cow position: | chr11:1668632-1668448 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 16-197 |
| Cow position: | chr11:3393254-3393440 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 6, 105 |
| Conread position: | 16-197 |
| Cow position: | chr11:7333765-7333951 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 16-197 |
| Cow position: | chr11:11232500-11232682 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 16-197 |
| Cow position: | chr11:40818681-40818868 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 16-197 |
| Cow position: | chr11:67747241-67747052 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 16-212 |
| Cow position: | chr11:68206888-68207083 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 17-197 |
| Cow position: | chr11:2309827-2309644 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 18-196 |
| Cow position: | chr11:29004386-29004207 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 120 |
| Conread position: | 18-197 |
| Cow position: | chr11:44031954-44031770 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 18-211 |
| Cow position: | chr11:952223-952024 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 19-166 |
| Cow position: | chr11:15339018-15338876 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 21-197 |
| Cow position: | chr11:44636806-44636990 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 48, 151 |
| Conread position: | 21-197 |
| Cow position: | chr11:48272149-48271965 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 22-197 |
| Cow position: | chr11:43524570-43524393 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 46 |
| Conread position: | 22-197 |
| Cow position: | chr11:54856578-54856405 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 22-197 |
| Cow position: | chr11:62490383-62490204 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 23-197 |
| Cow position: | chr11:23128593-23128769 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 147 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 48, 109 |
| Conread position: | 23-197 |
| Cow position: | chr11:59702434-59702254 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 25-197 |
| Cow position: | chr11:19508243-19508068 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 46, 136 |
| Conread position: | 28-198 |
| Cow position: | chr11:44575799-44575967 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 91, 37 |
| Conread position: | 31-194 |
| Cow position: | chr11:64044183-64044012 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 31-197 |
| Cow position: | chr11:63520714-63520543 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 32-196 |
| Cow position: | chr11:24585119-24584952 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 101 |
| Conread position: | 32-196 |
| Cow position: | chr11:58400203-58400035 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 64 |
| Conread position: | 32-197 |
| Cow position: | chr11:33348243-33348414 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 33-162 |
| Cow position: | chr11:8936551-8936678 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 33 |
| Conread position: | 44-197 |
| Cow position: | chr11:65159520-65159676 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 116 |
| Conread position: | 44-199 |
| Cow position: | chr11:72292162-72292012 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 108 |
| Conread position: | 45-197 |
| Cow position: | chr11:50072875-50072732 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 45-223 |
| Cow position: | chr11:64932373-64932553 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 57-197 |
| Cow position: | chr11:62376520-62376667 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 65-197 |
| Cow position: | chr11:15608386-15608523 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 68-197 |
| Cow position: | chr11:46747962-46748096 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 69-196 |
| Cow position: | chr11:26277190-26277319 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 84-197 |
| Cow position: | chr11:78480685-78480567 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 85-197 |
| Cow position: | chr11:75510346-75510463 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 92-197 |
| Cow position: | chr11:30466739-30466849 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 93-197 |
| Cow position: | chr11:31227866-31227765 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 94-197 |
| Cow position: | chr11:49873303-49873197 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.