Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-132
Cow position: chr14:23080718-23080578 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 131

Conread position: 1-133
Cow position: chr14:16549954-16549816 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-146
Cow position: chr14:41966293-41966442 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 1-169
Cow position: chr14:10078317-10078492 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 107

Conread position: 1-177
Cow position: chr14:26490693-26490510 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 121

Conread position: 1-195
Cow position: chr14:10721679-10721483 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 145

Conread position: 1-195
Cow position: chr14:24796384-24796172 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 1-195
Cow position: chr14:27591908-27591703 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 111

Conread position: 1-196
Cow position: chr14:10912917-10912720 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 73

Conread position: 1-196
Cow position: chr14:11748861-11748668 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 61

Conread position: 1-196
Cow position: chr14:23712737-23712939 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 1-196
Cow position: chr14:33462212-33462412 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 68, 105

Conread position: 1-197
Cow position: chr14:17397545-17397351 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 72, 20

Conread position: 1-197
Cow position: chr14:20600436-20600635 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 50

Conread position: 1-197
Cow position: chr14:33791237-33791443 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 1-214
Cow position: chr14:11820071-11819853 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 1-234
Cow position: chr14:19863384-19863147 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 143

Conread position: 1-234
Cow position: chr14:39770185-39769937 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 2-182
Cow position: chr14:42596432-42596619 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 72

Conread position: 2-197
Cow position: chr14:19372389-19372597 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 2-197
Cow position: chr14:19633234-19633436 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 67, 30

Conread position: 2-211
Cow position: chr14:38338084-38337874 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 67, 18

Conread position: 3-193
Cow position: chr14:6419251-6419062 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 99

Conread position: 3-193
Cow position: chr14:32371691-32371493 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 87

Conread position: 3-197
Cow position: chr14:40432976-40433175 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 18

Conread position: 3-197
Cow position: chr14:41749709-41749509 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 26, 18

Conread position: 4-234
Cow position: chr14:18309241-18309016 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 65, 84

Conread position: 5-193
Cow position: chr14:31479295-31479104 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 78

Conread position: 5-194
Cow position: chr14:29632827-29632632 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 7-139
Cow position: chr14:15492654-15492790 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 7-196
Cow position: chr14:26433182-26432988 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 62

Conread position: 7-197
Cow position: chr14:19189100-19189293 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 40

Conread position: 10-133
Cow position: chr14:24608026-24608154 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 10-187
Cow position: chr14:13042816-13043005 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 10-192
Cow position: chr14:24387509-24387700 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 10-193
Cow position: chr14:34777513-34777329 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 131, 5

Conread position: 10-196
Cow position: chr14:21284684-21284883 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 10-196
Cow position: chr14:37883854-37883666 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 59

Conread position: 10-197
Cow position: chr14:4991064-4991245 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 67

Conread position: 10-197
Cow position: chr14:8964610-8964797 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 131, 52

Conread position: 10-197
Cow position: chr14:20640568-20640370 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 164
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 8, 0

Conread position: 10-197
Cow position: chr14:24991884-24992066 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 59, 128

Conread position: 10-197
Cow position: chr14:28115125-28114929 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 10-197
Cow position: chr14:37131715-37131912 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 11-196
Cow position: chr14:8848318-8848501 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 130, 12

Conread position: 11-196
Cow position: chr14:47584594-47584396 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 11-197
Cow position: chr14:35018690-35018502 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 39

Conread position: 11-197
Cow position: chr14:41210916-41211110 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 161
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 12, 0

Conread position: 12-184
Cow position: chr14:20110657-20110479 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 21, 36

Conread position: 12-197
Cow position: chr14:42154898-42154707 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 18

Conread position: 12-204
Cow position: chr14:14417432-14417243 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 56

Conread position: 14-169
Cow position: chr14:20826541-20826698 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 26

Conread position: 14-197
Cow position: chr14:35544445-35544261 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 81, 16

Conread position: 15-195
Cow position: chr14:33714610-33714436 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 15-197
Cow position: chr14:36437418-36437232 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 87, 53

Conread position: 16-195
Cow position: chr14:49563593-49563417 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 7

Conread position: 16-197
Cow position: chr14:19594063-19593886 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 74

Conread position: 16-197
Cow position: chr14:22583214-22583393 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 32

Conread position: 16-197
Cow position: chr14:34083079-34082901 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 17, 38

Conread position: 17-197
Cow position: chr14:34983933-34984118 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 52, 24

Conread position: 18-196
Cow position: chr14:39918690-39918510 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 8, 42

Conread position: 18-197
Cow position: chr14:26442271-26442084 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 85

Conread position: 19-197
Cow position: chr14:39774978-39774801 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 76

Conread position: 21-196
Cow position: chr14:39778828-39779006 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 152
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 114, 51

Conread position: 21-197
Cow position: chr14:34199777-34199588 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 153
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 22-181
Cow position: chr14:20301938-20301769 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 22-204
Cow position: chr14:17013578-17013769 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 165

Conread position: 23-188
Cow position: chr14:8750150-8750319 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 143
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 23-194
Cow position: chr14:27791608-27791781 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 118, 38

Conread position: 26-197
Cow position: chr14:50589306-50589136 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 105

Conread position: 31-204
Cow position: chr14:46735387-46735573 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 32-193
Cow position: chr14:16033092-16033257 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 142

Conread position: 32-196
Cow position: chr14:33773966-33773798 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 75, 37

Conread position: 32-197
Cow position: chr14:12614010-12613848 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 126

Conread position: 33-260
Cow position: chr14:18448926-18448686 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 35-197
Cow position: chr14:25885597-25885753 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 10

Conread position: 43-197
Cow position: chr14:36167036-36167187 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 41

Conread position: 44-197
Cow position: chr14:37640331-37640486 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 94

Conread position: 44-223
Cow position: chr14:24581021-24581205 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 25, 14

Conread position: 48-197
Cow position: chr14:35651105-35650952 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 50

Conread position: 68-197
Cow position: chr14:21534912-21534786 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 70-202
Cow position: chr14:36775730-36775859 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 74-234
Cow position: chr14:20736657-20736824 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 67, 45

Conread position: 75-192
Cow position: chr14:19106002-19106121 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 92-197
Cow position: chr14:2036684-2036789 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 101

Show alignments to all cow chromosomes.