Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-146
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-163
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 30

Conread position: 1-176
Cow position:
Alignm length: 185
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 0

Conread position: 1-194
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 1-194
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 114

Conread position: 1-195
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 29, 95

Conread position: 1-196
Cow position:
Alignm length: 209
Alignm identity: 164
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 176

Conread position: 1-197
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 0

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 20, 109

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 151

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 16, 144

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 140, 26

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 159
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 30

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 166
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 134, 22

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 33, 0

Conread position: 1-212
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 1-234
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 19, 91

Conread position: 2-149
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 127

Conread position: 2-179
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 69

Conread position: 2-211
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 130

Conread position: 3-177
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 9

Conread position: 3-197
Cow position:
Alignm length: 196
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 70, 17

Conread position: 4-173
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 66

Conread position: 4-197
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 40

Conread position: 5-188
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 111

Conread position: 5-192
Cow position:
Alignm length: 195
Alignm identity: 157
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 15, 137

Conread position: 5-197
Cow position:
Alignm length: 203
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 19

Conread position: 6-192
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 9

Conread position: 6-197
Cow position:
Alignm length: 196
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 22

Conread position: 9-197
Cow position:
Alignm length: 192
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 14

Conread position: 10-127
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 49

Conread position: 10-195
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 10-195
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 10-196
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 40

Conread position: 10-196
Cow position:
Alignm length: 194
Alignm identity: 157
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 156
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 11, 32

Conread position: 10-197
Cow position:
Alignm length: 196
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 11-187
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 11-189
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 63

Conread position: 11-196
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 23, 150

Conread position: 11-197
Cow position:
Alignm length: 194
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 100

Conread position: 11-197
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 121

Conread position: 11-197
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 11, 123

Conread position: 11-197
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 21

Conread position: 11-239
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 114, 20

Conread position: 12-185
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 11

Conread position: 12-197
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 41

Conread position: 12-197
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 37

Conread position: 12-197
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 57

Conread position: 12-234
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 12-245
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 20

Conread position: 14-197
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 46

Conread position: 15-197
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 16-185
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 16-194
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 53, 129

Conread position: 16-197
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 59

Conread position: 16-197
Cow position:
Alignm length: 185
Alignm identity: 147
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 54, 172

Conread position: 16-197
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 17-132
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 19

Conread position: 17-188
Cow position:
Alignm length: 178
Alignm identity: 143
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 124, 13

Conread position: 20-195
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 112

Conread position: 20-197
Cow position:
Alignm length: 186
Alignm identity: 149
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 150

Conread position: 21-241
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 48, 176

Conread position: 25-193
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 44

Conread position: 25-197
Cow position:
Alignm length: 177
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 113

Conread position: 31-178
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 110, 40

Conread position: 31-186
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 108

Conread position: 33-198
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 33-214
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 35-197
Cow position:
Alignm length: 171
Alignm identity: 145
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 41-223
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 100, 24

Conread position: 46-197
Cow position:
Alignm length: 156
Alignm identity: 129
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 47-194
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 28

Conread position: 48-196
Cow position:
Alignm length: 152
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 5

Conread position: 68-197
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 69-197
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 75-197
Cow position:
Alignm length: 128
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 87-197
Cow position:
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 88-234
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 130, 54

Conread position: 93-197
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.