Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-125
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 17, 106

Conread position: 1-139
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 8

Conread position: 1-157
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 20

Conread position: 1-173
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 1-173
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 48

Conread position: 1-177
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 108

Conread position: 1-184
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 19

Conread position: 1-185
Cow position:
Alignm length: 190
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-187
Cow position:
Alignm length: 199
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 75

Conread position: 1-187
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 74

Conread position: 1-189
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 1-191
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 94

Conread position: 1-191
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 20

Conread position: 1-195
Cow position:
Alignm length: 203
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 19

Conread position: 1-195
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 162

Conread position: 1-195
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 1-195
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 154

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 65

Conread position: 1-196
Cow position:
Alignm length: 203
Alignm identity: 165
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 19, 156

Conread position: 1-196
Cow position:
Alignm length: 209
Alignm identity: 168
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 23, 111

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 18, 143

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 74

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 26

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 20

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 146

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 164
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 112

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 20

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 17, 143

Conread position: 1-197
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 35

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 139

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 68, 20

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 163

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 21

Conread position: 1-197
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 19, 58

Conread position: 1-197
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 187

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 176

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 68, 25

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 29

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 8, 44

Conread position: 1-198
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 1-201
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 67

Conread position: 1-220
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 78

Conread position: 1-234
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 19, 142

Conread position: 1-234
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 32, 20

Conread position: 1-234
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 20

Conread position: 1-241
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 225

Conread position: 1-242
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 2-197
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 2-197
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 21

Conread position: 2-197
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 15, 75

Conread position: 3-148
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 69

Conread position: 3-193
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 118

Conread position: 3-197
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 64

Conread position: 3-197
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 69

Conread position: 3-197
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 3-197
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 4-193
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 4-211
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 22

Conread position: 5-197
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 11

Conread position: 5-234
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 7, 19

Conread position: 6-197
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 89

Conread position: 7-155
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 89

Conread position: 7-164
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 5

Conread position: 7-195
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 98

Conread position: 7-197
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 101

Conread position: 7-197
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 91

Conread position: 10-125
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 10-156
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 109

Conread position: 10-162
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 10-186
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 8, 20

Conread position: 10-191
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 8, 64

Conread position: 10-196
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 14

Conread position: 10-197
Cow position:
Alignm length: 199
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 10-197
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 131

Conread position: 10-197
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 139

Conread position: 10-197
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 122

Conread position: 10-197
Cow position:
Alignm length: 202
Alignm identity: 165
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 10-197
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 128

Conread position: 10-197
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 124

Conread position: 10-212
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 178

Conread position: 10-234
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 10, 64

Conread position: 11-197
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 17, 57

Conread position: 11-197
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 136

Conread position: 11-197
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 11-197
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 11-197
Cow position:
Alignm length: 193
Alignm identity: 149
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 130, 46

Conread position: 11-197
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 35

Conread position: 11-197
Cow position:
Alignm length: 191
Alignm identity: 155
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 7, 0

Conread position: 11-197
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 33

Conread position: 12-195
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 71

Conread position: 12-197
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 12-197
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 57

Conread position: 12-197
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 12

Conread position: 12-255
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 9, 229

Conread position: 13-174
Cow position:
Alignm length: 167
Alignm identity: 138
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 56, 18

Conread position: 14-154
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 127, 55

Conread position: 14-157
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 14-189
Cow position:
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 78

Conread position: 15-196
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 125

Conread position: 15-196
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 126, 56

Conread position: 15-196
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 146

Conread position: 15-197
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 15-197
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 18, 31

Conread position: 15-211
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 188, 54

Conread position: 16-143
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 16-143
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 125, 55

Conread position: 16-195
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 136

Conread position: 16-197
Cow position:
Alignm length: 186
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 87

Conread position: 17-197
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 18-197
Cow position:
Alignm length: 185
Alignm identity: 147
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 123, 47

Conread position: 18-197
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 129, 50

Conread position: 21-197
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 21-197
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 48, 105

Conread position: 21-197
Cow position:
Alignm length: 185
Alignm identity: 152
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 21-197
Cow position:
Alignm length: 181
Alignm identity: 151
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 22-178
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 22-196
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 23-197
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 23-214
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 118, 27

Conread position: 23-214
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 24-211
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 31-139
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 31-178
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 31-202
Cow position:
Alignm length: 176
Alignm identity: 145
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 37, 14

Conread position: 32-124
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 32-162
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 32-179
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position:
Alignm length: 169
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 113

Conread position: 32-197
Cow position:
Alignm length: 172
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 32-233
Cow position:
Alignm length: 211
Alignm identity: 166
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 25

Conread position: 32-261
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 211

Conread position: 33-195
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 141

Conread position: 33-196
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 80

Conread position: 33-197
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 51-196
Cow position:
Alignm length: 151
Alignm identity: 128
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 52-197
Cow position:
Alignm length: 149
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 89

Conread position: 68-196
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 93-196
Cow position:
Alignm length: 107
Alignm identity: 94
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.