Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-144
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 19, 31

Conread position: 1-149
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 32

Conread position: 1-154
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 69

Conread position: 1-179
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 29

Conread position: 1-192
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 19

Conread position: 1-194
Cow position:
Alignm length: 205
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 115

Conread position: 1-195
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 146, 10

Conread position: 1-195
Cow position:
Alignm length: 206
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 17, 74

Conread position: 1-196
Cow position:
Alignm length: 205
Alignm identity: 163
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 199

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 115

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 171

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 155
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 15, 74

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 26

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 141

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 30

Conread position: 1-197
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 68, 27

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 51

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 163

Conread position: 1-197
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 12, 203

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 167
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 19, 142

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 21

Conread position: 1-200
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 143

Conread position: 1-206
Cow position:
Alignm length: 220
Alignm identity: 175
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 0

Conread position: 1-211
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 97

Conread position: 1-234
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 20

Conread position: 2-161
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 2-197
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 10, 25

Conread position: 2-197
Cow position:
Alignm length: 204
Alignm identity: 165
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 10, 22

Conread position: 2-197
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 2-202
Cow position:
Alignm length: 206
Alignm identity: 163
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 17, 71

Conread position: 2-212
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 3-185
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 17, 82

Conread position: 3-197
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 168
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 27, 44

Conread position: 4-133
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 10

Conread position: 4-195
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 7

Conread position: 4-197
Cow position:
Alignm length: 200
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 85

Conread position: 6-140
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 15

Conread position: 7-181
Cow position:
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 7-197
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 7-197
Cow position:
Alignm length: 196
Alignm identity: 160
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 134, 16

Conread position: 10-141
Cow position:
Alignm length: 136
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 22, 122

Conread position: 10-193
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 10-197
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 136

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 145

Conread position: 10-197
Cow position:
Alignm length: 195
Alignm identity: 155
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 11, 0

Conread position: 10-197
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 0

Conread position: 10-197
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 10-197
Cow position:
Alignm length: 196
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 11, 80

Conread position: 10-197
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 134

Conread position: 10-199
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 47

Conread position: 10-202
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 59

Conread position: 10-214
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 116

Conread position: 11-184
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 11-191
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 9, 47

Conread position: 11-195
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 114, 0

Conread position: 11-197
Cow position:
Alignm length: 192
Alignm identity: 155
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 9, 111

Conread position: 11-197
Cow position:
Alignm length: 190
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 125

Conread position: 11-197
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 130, 16

Conread position: 11-197
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 11

Conread position: 11-197
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 53

Conread position: 11-206
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 12

Conread position: 12-193
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 19

Conread position: 12-197
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 44, 33

Conread position: 12-210
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 13-243
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 45

Conread position: 15-152
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 15-194
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 8

Conread position: 15-197
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 0

Conread position: 15-197
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 15-197
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 126

Conread position: 15-210
Cow position:
Alignm length: 203
Alignm identity: 162
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 20, 8

Conread position: 15-210
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 15-223
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 41

Conread position: 16-191
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 73

Conread position: 16-193
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 152

Conread position: 16-195
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 15

Conread position: 16-197
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 168

Conread position: 16-197
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 51

Conread position: 16-363
Cow position:
Alignm length: 356
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 13

Conread position: 21-196
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 21-197
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 22-192
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 82, 62

Conread position: 22-197
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 65

Conread position: 23-195
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 46, 114

Conread position: 31-191
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 112, 26

Conread position: 31-193
Cow position:
Alignm length: 171
Alignm identity: 139
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 31-197
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 31-197
Cow position:
Alignm length: 174
Alignm identity: 142
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 31-197
Cow position:
Alignm length: 175
Alignm identity: 145
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 69

Conread position: 31-211
Cow position:
Alignm length: 184
Alignm identity: 153
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 38, 58

Conread position: 31-226
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 32-186
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 32-196
Cow position:
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 32-197
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position:
Alignm length: 170
Alignm identity: 142
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 32-197
Cow position:
Alignm length: 172
Alignm identity: 144
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 33-197
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 12

Conread position: 41-201
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 42-197
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 42

Conread position: 42-197
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 94

Conread position: 44-185
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 48-196
Cow position:
Alignm length: 154
Alignm identity: 130
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 53-197
Cow position:
Alignm length: 149
Alignm identity: 124
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 57-193
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 107

Conread position: 59-197
Cow position:
Alignm length: 143
Alignm identity: 120
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 74-194
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 79-197
Cow position:
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 106

Conread position: 85-210
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 86-197
Cow position:
Alignm length: 113
Alignm identity: 100
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.