Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-124
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 68

Conread position: 1-145
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 1-193
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 26

Conread position: 1-193
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 68, 19

Conread position: 1-195
Cow position:
Alignm length: 201
Alignm identity: 161
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 27

Conread position: 1-195
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 171

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 125, 30

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 20

Conread position: 1-196
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 13, 142

Conread position: 1-196
Cow position:
Alignm length: 196
Alignm identity: 162
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 1-196
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 68

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 137

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 73

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 160
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 30

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 76

Conread position: 1-197
Cow position:
Alignm length: 211
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 196

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 68

Conread position: 1-197
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 20

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 86

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 139

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 155

Conread position: 1-197
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 54

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 34, 90

Conread position: 1-197
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 181

Conread position: 1-198
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 34

Conread position: 1-199
Cow position:
Alignm length: 213
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 2-197
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 27

Conread position: 2-197
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 138

Conread position: 3-168
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 3-168
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 3-197
Cow position:
Alignm length: 205
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 3-197
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 69

Conread position: 3-212
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 4-195
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 65, 12

Conread position: 4-195
Cow position:
Alignm length: 204
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 72

Conread position: 4-197
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 5-193
Cow position:
Alignm length: 193
Alignm identity: 156
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 82

Conread position: 5-196
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 5-196
Cow position:
Alignm length: 193
Alignm identity: 153
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 134, 16

Conread position: 6-178
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 91

Conread position: 6-193
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 129

Conread position: 6-197
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 25

Conread position: 6-197
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 63

Conread position: 7-133
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 90

Conread position: 7-139
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 7-182
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 171

Conread position: 7-187
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 61

Conread position: 7-191
Cow position:
Alignm length: 194
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 23

Conread position: 7-197
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 7-197
Cow position:
Alignm length: 197
Alignm identity: 158
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 15, 137

Conread position: 7-197
Cow position:
Alignm length: 200
Alignm identity: 159
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 20, 8

Conread position: 8-196
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 8-234
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 16, 114

Conread position: 10-162
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 58

Conread position: 10-193
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 88

Conread position: 10-197
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 12

Conread position: 10-211
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 130

Conread position: 11-146
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 58

Conread position: 11-190
Cow position:
Alignm length: 188
Alignm identity: 156
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 19

Conread position: 11-193
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 133

Conread position: 11-197
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 162

Conread position: 11-197
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 9, 112

Conread position: 11-197
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 19

Conread position: 11-197
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 134

Conread position: 11-197
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 60

Conread position: 11-199
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 12-177
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 89, 56

Conread position: 12-196
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 11

Conread position: 12-196
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 12-197
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 169

Conread position: 12-197
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 10, 147

Conread position: 14-196
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 92

Conread position: 14-197
Cow position:
Alignm length: 188
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 170

Conread position: 15-193
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 20, 129

Conread position: 15-197
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 56

Conread position: 15-197
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 54

Conread position: 16-178
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 16-196
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 69

Conread position: 16-197
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 59

Conread position: 16-197
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 25

Conread position: 16-197
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 122

Conread position: 16-223
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 50

Conread position: 17-197
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 11

Conread position: 18-163
Cow position:
Alignm length: 153
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 67

Conread position: 19-212
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 28

Conread position: 21-205
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 66

Conread position: 22-196
Cow position:
Alignm length: 183
Alignm identity: 142
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 22-197
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 46

Conread position: 22-201
Cow position:
Alignm length: 188
Alignm identity: 151
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 48, 151

Conread position: 22-211
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 45

Conread position: 23-196
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 9, 134

Conread position: 31-139
Cow position:
Alignm length: 110
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 26

Conread position: 31-197
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 117

Conread position: 32-188
Cow position:
Alignm length: 162
Alignm identity: 136
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 106

Conread position: 32-195
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 42, 156

Conread position: 32-197
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 93

Conread position: 32-197
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 91

Conread position: 32-197
Cow position:
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 13

Conread position: 32-197
Cow position:
Alignm length: 173
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position:
Alignm length: 169
Alignm identity: 138
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 62

Conread position: 32-204
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 33-193
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 63

Conread position: 33-197
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 122

Conread position: 35-157
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 36-162
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 38-197
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 115

Conread position: 45-196
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 24

Conread position: 46-197
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 53-195
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 33

Conread position: 53-197
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 80

Conread position: 57-197
Cow position:
Alignm length: 143
Alignm identity: 121
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 68-177
Cow position:
Alignm length: 116
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 68-179
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 11

Conread position: 68-204
Cow position:
Alignm length: 138
Alignm identity: 116
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 78-198
Cow position:
Alignm length: 122
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 47

Conread position: 84-194
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 88-210
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 93-197
Cow position:
Alignm length: 105
Alignm identity: 90
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.