Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-180
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 146

Conread position: 1-185
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 1-188
Cow position:
Alignm length: 193
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 19

Conread position: 1-188
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 15, 108

Conread position: 1-191
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 86

Conread position: 1-196
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 48

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 158

Conread position: 1-197
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 19, 186

Conread position: 1-197
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 21

Conread position: 1-197
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 52

Conread position: 1-197
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 93

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 74

Conread position: 1-197
Cow position:
Alignm length: 210
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 0

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 167
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 71

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 88

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 131

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 81

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 168, 136

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 65

Conread position: 1-211
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 57

Conread position: 1-212
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 58, 21

Conread position: 1-214
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 140

Conread position: 1-223
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 142

Conread position: 2-153
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 29

Conread position: 2-197
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 18, 75

Conread position: 2-197
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 7

Conread position: 2-197
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 117

Conread position: 3-148
Cow position:
Alignm length: 147
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 138, 29

Conread position: 3-193
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 17, 139

Conread position: 3-197
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 142

Conread position: 3-197
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 52

Conread position: 3-197
Cow position:
Alignm length: 200
Alignm identity: 161
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 25, 55

Conread position: 3-197
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 138, 25

Conread position: 3-210
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 13

Conread position: 4-143
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 19

Conread position: 4-178
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 16, 137

Conread position: 4-197
Cow position:
Alignm length: 200
Alignm identity: 164
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 32, 17

Conread position: 5-176
Cow position:
Alignm length: 180
Alignm identity: 146
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 21

Conread position: 5-197
Cow position:
Alignm length: 196
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 18

Conread position: 7-193
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 60, 131

Conread position: 7-196
Cow position:
Alignm length: 196
Alignm identity: 157
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 26, 61

Conread position: 7-197
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 76

Conread position: 7-197
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 100

Conread position: 8-186
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 10-185
Cow position:
Alignm length: 186
Alignm identity: 147
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 11, 86

Conread position: 10-188
Cow position:
Alignm length: 187
Alignm identity: 151
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 10-194
Cow position:
Alignm length: 193
Alignm identity: 155
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 10-195
Cow position:
Alignm length: 188
Alignm identity: 153
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 26, 51

Conread position: 10-195
Cow position:
Alignm length: 199
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 90

Conread position: 10-195
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 44

Conread position: 10-195
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 36

Conread position: 10-196
Cow position:
Alignm length: 192
Alignm identity: 157
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 145

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 133

Conread position: 10-197
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 94

Conread position: 10-197
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 105

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 131, 58

Conread position: 10-214
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 38

Conread position: 10-234
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 115

Conread position: 10-250
Cow position:
Alignm length: 247
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 151

Conread position: 11-175
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 31

Conread position: 11-195
Cow position:
Alignm length: 193
Alignm identity: 155
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 11-197
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 11-197
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 11-197
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 152

Conread position: 11-197
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 12-185
Cow position:
Alignm length: 179
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 9

Conread position: 12-193
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 12-197
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 14

Conread position: 12-197
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 57, 73

Conread position: 12-197
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 12-211
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 38

Conread position: 12-253
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 70

Conread position: 14-197
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 92

Conread position: 14-204
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 8

Conread position: 15-195
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 90

Conread position: 15-196
Cow position:
Alignm length: 195
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 12

Conread position: 15-202
Cow position:
Alignm length: 197
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 56, 181

Conread position: 16-190
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 16-195
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 52

Conread position: 16-195
Cow position:
Alignm length: 188
Alignm identity: 149
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 16-197
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 6, 121

Conread position: 16-197
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 134

Conread position: 16-197
Cow position:
Alignm length: 187
Alignm identity: 150
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 7, 127

Conread position: 16-197
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 14

Conread position: 16-237
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 125, 48

Conread position: 17-187
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 52

Conread position: 17-193
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 13

Conread position: 17-197
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 9, 58

Conread position: 17-197
Cow position:
Alignm length: 190
Alignm identity: 157
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 17-197
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 25

Conread position: 19-195
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 179

Conread position: 21-197
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 22-265
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 14

Conread position: 25-153
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 31-197
Cow position:
Alignm length: 183
Alignm identity: 147
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 32-153
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 66

Conread position: 32-187
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 32-190
Cow position:
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 32-197
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 37, 114

Conread position: 32-197
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 36

Conread position: 32-197
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 39, 67

Conread position: 32-197
Cow position:
Alignm length: 174
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 110

Conread position: 32-212
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 33-197
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 102

Conread position: 33-197
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 34-197
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 35-199
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 163

Conread position: 36-197
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 37-194
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 37-197
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 32, 65

Conread position: 37-197
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 97

Conread position: 42-193
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 43-197
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.