Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-121
Cow position: chr24:4615551-4615677 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 48

Conread position: 1-146
Cow position: chr24:32070932-32070782 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 1-179
Cow position: chr24:39833546-39833733 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 35

Conread position: 1-188
Cow position: chr24:9070470-9070660 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 149

Conread position: 1-195
Cow position: chr24:11734692-11734489 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 72

Conread position: 1-195
Cow position: chr24:43927361-43927555 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 29, 44

Conread position: 1-197
Cow position: chr24:3430703-3430500 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 124

Conread position: 1-197
Cow position: chr24:18374737-18374539 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 67, 19

Conread position: 1-197
Cow position: chr24:23694937-23695132 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 79, 20

Conread position: 1-197
Cow position: chr24:24491048-24491246 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 69

Conread position: 1-197
Cow position: chr24:28062918-28062710 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 46

Conread position: 1-197
Cow position: chr24:29028010-29027811 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 141

Conread position: 1-197
Cow position: chr24:29063688-29063881 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 32

Conread position: 1-197
Cow position: chr24:29679341-29679546 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 72

Conread position: 1-197
Cow position: chr24:29782134-29781926 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 26, 176

Conread position: 1-197
Cow position: chr24:34742721-34742514 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 202

Conread position: 1-197
Cow position: chr24:42825529-42825733 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 20

Conread position: 1-197
Cow position: chr24:43371213-43371013 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 130

Conread position: 1-211
Cow position: chr24:20943137-20942919 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 18, 132

Conread position: 2-131
Cow position: chr24:17492269-17492147 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 2-181
Cow position: chr24:40673461-40673656 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 2-194
Cow position: chr24:2402400-2402609 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 2-196
Cow position: chr24:17860290-17860485 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 74

Conread position: 3-144
Cow position: chr24:29180851-29180706 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 3-197
Cow position: chr24:1269753-1269569 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 3-197
Cow position: chr24:27941046-27941243 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 180

Conread position: 3-197
Cow position: chr24:36404175-36404383 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 3-206
Cow position: chr24:15057366-15057158 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 141

Conread position: 4-193
Cow position: chr24:14746598-14746404 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 7

Conread position: 4-197
Cow position: chr24:211944-211746 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 24

Conread position: 4-197
Cow position: chr24:17407351-17407154 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 76

Conread position: 4-197
Cow position: chr24:39849920-39850114 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 17

Conread position: 5-197
Cow position: chr24:38347647-38347445 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 23

Conread position: 7-195
Cow position: chr24:11887119-11886924 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 86

Conread position: 7-196
Cow position: chr24:33221982-33222174 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 132

Conread position: 8-197
Cow position: chr24:28303408-28303584 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 56

Conread position: 10-133
Cow position: chr24:18357096-18357223 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 43

Conread position: 10-195
Cow position: chr24:31324241-31324047 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 11, 187

Conread position: 10-195
Cow position: chr24:35074050-35073859 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 10-196
Cow position: chr24:33153733-33153548 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 125

Conread position: 10-196
Cow position: chr24:35794779-35794974 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 10-197
Cow position: chr24:5141900-5141705 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 0

Conread position: 10-197
Cow position: chr24:6340970-6340782 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 63

Conread position: 10-197
Cow position: chr24:6487875-6487685 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 66

Conread position: 10-197
Cow position: chr24:11876844-11876648 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 160
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 10-249
Cow position: chr24:20874638-20874387 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 15, 244

Conread position: 11-194
Cow position: chr24:16556682-16556870 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 79

Conread position: 11-195
Cow position: chr24:16267727-16267559 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 43

Conread position: 12-166
Cow position: chr24:19634026-19633869 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 60

Conread position: 12-197
Cow position: chr24:38814920-38814736 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 89, 67

Conread position: 14-165
Cow position: chr24:6131924-6132080 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 9

Conread position: 14-197
Cow position: chr24:42380759-42380938 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 68

Conread position: 15-154
Cow position: chr24:17938712-17938575 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 105

Conread position: 15-167
Cow position: chr24:18786965-18787124 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 19, 149

Conread position: 15-192
Cow position: chr24:27608149-27608328 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 68

Conread position: 15-195
Cow position: chr24:2970653-2970840 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 15-197
Cow position: chr24:39226950-39226763 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 16

Conread position: 15-211
Cow position: chr24:24755395-24755199 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 104

Conread position: 16-139
Cow position: chr24:37037847-37037723 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 87

Conread position: 16-157
Cow position: chr24:30897588-30897733 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 16-197
Cow position: chr24:3165765-3165586 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 33

Conread position: 16-197
Cow position: chr24:17104621-17104801 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 101

Conread position: 16-197
Cow position: chr24:17311270-17311444 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 122, 7

Conread position: 16-197
Cow position: chr24:25885209-25885393 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 7, 109

Conread position: 16-197
Cow position: chr24:39483427-39483238 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 0

Conread position: 17-184
Cow position: chr24:29539957-29540133 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 17-197
Cow position: chr24:19769439-19769263 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 53

Conread position: 17-197
Cow position: chr24:30178184-30178001 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 152
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 52, 144

Conread position: 18-197
Cow position: chr24:7030208-7030390 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 16

Conread position: 20-226
Cow position: chr24:39841905-39842118 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 10

Conread position: 21-197
Cow position: chr24:24250673-24250497 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 122

Conread position: 21-232
Cow position: chr24:27726070-27726274 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 98

Conread position: 22-196
Cow position: chr24:29389186-29389012 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 95

Conread position: 22-211
Cow position: chr24:37246267-37246467 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 23-133
Cow position: chr24:23186978-23187087 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 31-170
Cow position: chr24:28990497-28990357 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 27

Conread position: 31-197
Cow position: chr24:32158341-32158507 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 110, 10

Conread position: 31-197
Cow position: chr24:37650606-37650435 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 31-201
Cow position: chr24:20969864-20970031 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 99

Conread position: 31-211
Cow position: chr24:30235802-30235620 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 152
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 110, 37

Conread position: 32-148
Cow position: chr24:18355156-18355036 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 32-191
Cow position: chr24:28327152-28327312 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 32-196
Cow position: chr24:11119219-11119048 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 133

Conread position: 32-196
Cow position: chr24:27810121-27809948 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position: chr24:40130061-40129887 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position: chr24:43635369-43635199 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 33-197
Cow position: chr24:25677971-25677799 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 144

Conread position: 34-194
Cow position: chr24:7001134-7001300 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 38-196
Cow position: chr24:41755791-41755628 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 85

Conread position: 41-197
Cow position: chr24:28349504-28349350 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 42-144
Cow position: chr24:16895512-16895618 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 42-197
Cow position: chr24:27824374-27824229 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 54

Conread position: 42-210
Cow position: chr24:27465653-27465819 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 96

Conread position: 44-217
Cow position: chr24:18474823-18475004 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 144

Conread position: 47-195
Cow position: chr24:20923505-20923362 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 89

Conread position: 68-193
Cow position: chr24:34315249-34315126 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 74

Conread position: 68-195
Cow position: chr24:18732228-18732356 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 91

Conread position: 70-197
Cow position: chr24:28689599-28689475 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 9

Conread position: 86-197
Cow position: chr24:15288737-15288622 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 8

Show alignments to all cow chromosomes.