Cow genome map
| Conread name: | rret16_g12.y1 |
| Conread position: | 1-133 |
| Cow position: | chr26:26950440-26950574 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 1-144 |
| Cow position: | chr26:16721868-16721727 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 1-144 |
| Cow position: | chr26:31572256-31572112 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 1-162 |
| Cow position: | chr26:23582935-23583104 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 19, 167 |
| Conread position: | 1-196 |
| Cow position: | chr26:22892435-22892633 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 1-196 |
| Cow position: | chr26:26466718-26466913 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 1-197 |
| Cow position: | chr26:13021135-13021343 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-197 |
| Cow position: | chr26:26888123-26888328 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 1-197 |
| Cow position: | chr26:31605416-31605213 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 166 |
| Conread position: | 1-210 |
| Cow position: | chr26:20291682-20291890 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 1-210 |
| Cow position: | chr26:32955623-32955832 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 19, 116 |
| Conread position: | 1-211 |
| Cow position: | chr26:8700037-8700258 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 1-211 |
| Cow position: | chr26:27491488-27491714 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-223 |
| Cow position: | chr26:9867118-9867336 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 3-179 |
| Cow position: | chr26:32035433-32035615 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 3-197 |
| Cow position: | chr26:6714292-6714477 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 3-197 |
| Cow position: | chr26:10747621-10747806 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 4-196 |
| Cow position: | chr26:19446131-19445944 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 140 |
| Conread position: | 5-189 |
| Cow position: | chr26:14175282-14175095 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 7-159 |
| Cow position: | chr26:12964695-12964852 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 10-197 |
| Cow position: | chr26:23925988-23926172 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 121 |
| Conread position: | 10-197 |
| Cow position: | chr26:25394030-25393836 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 155 |
| Conread position: | 10-234 |
| Cow position: | chr26:16549981-16549746 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 59, 5 |
| Conread position: | 11-196 |
| Cow position: | chr26:7525478-7525661 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 155 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 11-197 |
| Cow position: | chr26:9491922-9491734 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 9, 167 |
| Conread position: | 12-195 |
| Cow position: | chr26:10767918-10768093 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 12-197 |
| Cow position: | chr26:20129675-20129869 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 12-197 |
| Cow position: | chr26:28760097-28760281 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 12-197 |
| Cow position: | chr26:32897875-32898065 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 15-195 |
| Cow position: | chr26:30128030-30128211 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 124, 51 |
| Conread position: | 15-195 |
| Cow position: | chr26:33112391-33112577 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 15-197 |
| Cow position: | chr26:16783815-16783628 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 11, 147 |
| Conread position: | 15-197 |
| Cow position: | chr26:29353518-29353705 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 16-181 |
| Cow position: | chr26:23315757-23315588 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 16-196 |
| Cow position: | chr26:13706013-13706192 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 149 |
| Conread position: | 16-200 |
| Cow position: | chr26:17148695-17148504 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 53, 189 |
| Conread position: | 17-157 |
| Cow position: | chr26:33736563-33736702 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 96 |
| Conread position: | 17-197 |
| Cow position: | chr26:24280813-24280635 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 148 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 18-197 |
| Cow position: | chr26:12145130-12145302 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 18-197 |
| Cow position: | chr26:32013618-32013437 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 17, 139 |
| Conread position: | 22-197 |
| Cow position: | chr26:8034851-8034663 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 22-197 |
| Cow position: | chr26:24629728-24629551 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 32-173 |
| Cow position: | chr26:22249502-22249652 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 32-186 |
| Cow position: | chr26:32672461-32672623 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 32-198 |
| Cow position: | chr26:1329519-1329350 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 33-196 |
| Cow position: | chr26:9632397-9632564 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 33-197 |
| Cow position: | chr26:17289180-17289012 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 60, 123 |
| Conread position: | 33-197 |
| Cow position: | chr26:19769110-19769279 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 50-197 |
| Cow position: | chr26:33744851-33744695 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 59-163 |
| Cow position: | chr26:30104953-30104848 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 26 |
Show alignments to all cow chromosomes.