Cow genome map
Conread name: | rret16_g12.y1 |
Conread position: | 1-125 |
Cow position: | chr29:27329884-27329753 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1-149 |
Cow position: | chr29:1124646-1124491 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 1-157 |
Cow position: | chr29:24252230-24252066 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1-176 |
Cow position: | chr29:32211075-32211251 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 150 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 68, 20 |
Conread position: | 1-193 |
Cow position: | chr29:25737423-25737624 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 159 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 19, 147 |
Conread position: | 1-195 |
Cow position: | chr29:28166227-28166428 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 9, 32 |
Conread position: | 1-196 |
Cow position: | chr29:10456571-10456764 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 159 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 19, 31 |
Conread position: | 1-196 |
Cow position: | chr29:26735020-26734822 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 17, 97 |
Conread position: | 1-197 |
Cow position: | chr29:9709685-9709486 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 158 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 25, 96 |
Conread position: | 1-197 |
Cow position: | chr29:10156310-10156502 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 153 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 17, 139 |
Conread position: | 1-197 |
Cow position: | chr29:17109951-17109759 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 155 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 68, 33 |
Conread position: | 1-197 |
Cow position: | chr29:19792285-19792493 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 157 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 34, 21 |
Conread position: | 1-197 |
Cow position: | chr29:21000624-21000429 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 161 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 68, 20 |
Conread position: | 1-197 |
Cow position: | chr29:22714731-22714940 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 165 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1-197 |
Cow position: | chr29:22778184-22778394 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 167 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1-197 |
Cow position: | chr29:29769360-29769558 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 156 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 28, 166 |
Conread position: | 1-197 |
Cow position: | chr29:34773746-34773940 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 152 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 68, 151 |
Conread position: | 1-197 |
Cow position: | chr29:36217106-36216905 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 160 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 1-197 |
Cow position: | chr29:41811596-41811790 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 152 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 24, 77 |
Conread position: | 1-223 |
Cow position: | chr29:29975029-29974801 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 177 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 66, 14 |
Conread position: | 1-232 |
Cow position: | chr29:35501663-35501898 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 186 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 19, 39 |
Conread position: | 1-243 |
Cow position: | chr29:12680147-12679894 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 192 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 19, 32 |
Conread position: | 1-249 |
Cow position: | chr29:26330197-26329951 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 174 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 18, 154 |
Conread position: | 2-156 |
Cow position: | chr29:23243887-23244051 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 133 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 2-185 |
Cow position: | chr29:7040858-7041039 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 149 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 139, 24 |
Conread position: | 2-197 |
Cow position: | chr29:868765-868560 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 153 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 2-197 |
Cow position: | chr29:19762261-19762060 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 160 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 17, 68 |
Conread position: | 4-197 |
Cow position: | chr29:2533047-2532849 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 161 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 23, 68 |
Conread position: | 4-197 |
Cow position: | chr29:10838934-10838738 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 156 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 14, 27 |
Conread position: | 5-197 |
Cow position: | chr29:36586562-36586366 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 150 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 19, 10 |
Conread position: | 6-144 |
Cow position: | chr29:31674614-31674471 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 7-185 |
Cow position: | chr29:22613411-22613227 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 145 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 13, 161 |
Conread position: | 7-196 |
Cow position: | chr29:1556912-1556721 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 145 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 62, 16 |
Conread position: | 7-197 |
Cow position: | chr29:4480190-4480388 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 157 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 7-197 |
Cow position: | chr29:43328625-43328426 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 8-197 |
Cow position: | chr29:34736487-34736678 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 65, 134 |
Conread position: | 10-182 |
Cow position: | chr29:27588902-27588722 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 137 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 10-196 |
Cow position: | chr29:87033-87233 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 161 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 10-196 |
Cow position: | chr29:17607396-17607205 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 150 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 14, 64 |
Conread position: | 10-197 |
Cow position: | chr29:2623501-2623692 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 14, 61 |
Conread position: | 10-197 |
Cow position: | chr29:22936250-22936067 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 142 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 25, 93 |
Conread position: | 10-197 |
Cow position: | chr29:26615742-26615937 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 157 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 10-197 |
Cow position: | chr29:32799727-32799915 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 150 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 19, 139 |
Conread position: | 10-197 |
Cow position: | chr29:41530828-41530637 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 151 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 23, 95 |
Conread position: | 10-198 |
Cow position: | chr29:4328396-4328220 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 151 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 23, 48 |
Conread position: | 10-198 |
Cow position: | chr29:40763702-40763898 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 144 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 11, 33 |
Conread position: | 11-175 |
Cow position: | chr29:5186516-5186689 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 136 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 10, 87 |
Conread position: | 11-195 |
Cow position: | chr29:4194141-4194331 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 58, 14 |
Conread position: | 11-197 |
Cow position: | chr29:12451351-12451159 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 142 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 62, 15 |
Conread position: | 11-197 |
Cow position: | chr29:18735663-18735855 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 91, 57 |
Conread position: | 11-197 |
Cow position: | chr29:28197027-28197220 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 151 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 7, 95 |
Conread position: | 11-202 |
Cow position: | chr29:31489300-31489102 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 148 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 12-165 |
Cow position: | chr29:10235155-10235310 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 23, 82 |
Conread position: | 12-211 |
Cow position: | chr29:709147-709350 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 152 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 81, 15 |
Conread position: | 13-193 |
Cow position: | chr29:19601377-19601549 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 7, 22 |
Conread position: | 15-139 |
Cow position: | chr29:29314681-29314808 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 15-197 |
Cow position: | chr29:44232976-44233161 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 16-176 |
Cow position: | chr29:19125317-19125152 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 16-197 |
Cow position: | chr29:8190497-8190674 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 107, 52 |
Conread position: | 16-234 |
Cow position: | chr29:34745688-34745906 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 55, 123 |
Conread position: | 17-197 |
Cow position: | chr29:24103573-24103761 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 157 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 16, 29 |
Conread position: | 19-197 |
Cow position: | chr29:4066057-4065875 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 148 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 8, 146 |
Conread position: | 21-197 |
Cow position: | chr29:22162285-22162463 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 151 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 120 |
Conread position: | 21-211 |
Cow position: | chr29:40166208-40166015 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 155 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 105, 45 |
Conread position: | 22-184 |
Cow position: | chr29:3100290-3100461 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 141 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 24-197 |
Cow position: | chr29:44682134-44682303 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 134 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 45, 137 |
Conread position: | 31-245 |
Cow position: | chr29:45005673-45005875 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 110, 35 |
Conread position: | 32-197 |
Cow position: | chr29:28868592-28868420 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 37, 21 |
Conread position: | 33-197 |
Cow position: | chr29:7407932-7408101 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 41-197 |
Cow position: | chr29:19949249-19949097 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 130 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 99, 27 |
Conread position: | 49-181 |
Cow position: | chr29:26986872-26986742 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 111 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 20, 94 |
Conread position: | 52-197 |
Cow position: | chr29:5098823-5098974 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 52-197 |
Cow position: | chr29:28446319-28446472 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 126 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 55-212 |
Cow position: | chr29:40902788-40902947 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 130 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 68-195 |
Cow position: | chr29:686268-686402 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 111 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 80-197 |
Cow position: | chr29:23155160-23155038 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 102 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 87-197 |
Cow position: | chr29:18085492-18085378 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 87-197 |
Cow position: | chr29:21665869-21665758 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 94 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 88-197 |
Cow position: | chr29:36356746-36356639 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 53, 34 |
Conread position: | 89-181 |
Cow position: | chr29:34430382-34430289 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 82 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.