Cow genome map
| Conread name: | rret16_g12.y1 |
| Conread position: | 1-133 |
| Cow position: | chr3:56523473-56523599 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 1-148 |
| Cow position: | chr3:20677870-20678020 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 1-153 |
| Cow position: | chr3:27212333-27212172 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-157 |
| Cow position: | chr3:49218345-49218509 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-157 |
| Cow position: | chr3:74079667-74079833 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-167 |
| Cow position: | chr3:63269192-63269023 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 1-186 |
| Cow position: | chr3:60265282-60265459 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 1-195 |
| Cow position: | chr3:10347323-10347123 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-195 |
| Cow position: | chr3:27274500-27274301 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 1-195 |
| Cow position: | chr3:29813214-29813011 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-195 |
| Cow position: | chr3:39969894-39970104 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-195 |
| Cow position: | chr3:71238123-71237925 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 37, 191 |
| Conread position: | 1-195 |
| Cow position: | chr3:73443120-73443319 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 1-195 |
| Cow position: | chr3:75080732-75080534 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 140, 15 |
| Conread position: | 1-196 |
| Cow position: | chr3:53739216-53739423 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-196 |
| Cow position: | chr3:61190955-61191150 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 156 |
| Conread position: | 1-197 |
| Cow position: | chr3:10958271-10958463 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 127 |
| Conread position: | 1-197 |
| Cow position: | chr3:13118311-13118111 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 1-197 |
| Cow position: | chr3:15954116-15954311 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 1-197 |
| Cow position: | chr3:19789145-19789353 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-197 |
| Cow position: | chr3:26219082-26219296 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 1-197 |
| Cow position: | chr3:31046982-31047183 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 28, 165 |
| Conread position: | 1-197 |
| Cow position: | chr3:32585119-32584924 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 25, 136 |
| Conread position: | 1-197 |
| Cow position: | chr3:35283120-35283332 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-197 |
| Cow position: | chr3:39661487-39661684 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 1-197 |
| Cow position: | chr3:45881867-45881675 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 1-197 |
| Cow position: | chr3:49327913-49327703 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-197 |
| Cow position: | chr3:50768648-50768444 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-197 |
| Cow position: | chr3:53150294-53150093 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 120 |
| Conread position: | 1-197 |
| Cow position: | chr3:70899862-70899666 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 1-197 |
| Cow position: | chr3:71231365-71231172 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 1-197 |
| Cow position: | chr3:74409454-74409257 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 1-197 |
| Cow position: | chr3:74533318-74533114 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 1-197 |
| Cow position: | chr3:75711275-75711084 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 1-197 |
| Cow position: | chr3:78077154-78076955 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 140, 20 |
| Conread position: | 1-197 |
| Cow position: | chr3:79292798-79292600 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 1-197 |
| Cow position: | chr3:83201556-83201762 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-210 |
| Cow position: | chr3:28908234-28908443 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 138 |
| Conread position: | 1-210 |
| Cow position: | chr3:72676060-72675839 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 25, 20 |
| Conread position: | 1-234 |
| Cow position: | chr3:5374301-5374061 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 222 |
| Conread position: | 1-234 |
| Cow position: | chr3:23408387-23408616 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 1-234 |
| Cow position: | chr3:58968934-58969166 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 2-147 |
| Cow position: | chr3:20779781-20779928 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 2-188 |
| Cow position: | chr3:56301381-56301573 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 18 |
| Conread position: | 2-197 |
| Cow position: | chr3:19006626-19006433 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 2-197 |
| Cow position: | chr3:59208779-59208580 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 2-197 |
| Cow position: | chr3:70565769-70565972 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-184 |
| Cow position: | chr3:11063341-11063157 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 3-197 |
| Cow position: | chr3:116156-115973 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 3-197 |
| Cow position: | chr3:25691718-25691515 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 130 |
| Conread position: | 3-197 |
| Cow position: | chr3:31501315-31501113 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 4-189 |
| Cow position: | chr3:38864077-38863891 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 4-195 |
| Cow position: | chr3:58540563-58540765 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-196 |
| Cow position: | chr3:33327664-33327471 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 4-212 |
| Cow position: | chr3:62826657-62826873 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 5-139 |
| Cow position: | chr3:36418507-36418641 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 5-144 |
| Cow position: | chr3:19792856-19792712 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 5-197 |
| Cow position: | chr3:81401339-81401540 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 6, 111 |
| Conread position: | 5-198 |
| Cow position: | chr3:13353323-13353122 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-211 |
| Cow position: | chr3:44932471-44932259 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 6-196 |
| Cow position: | chr3:48363040-48362850 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 7-190 |
| Cow position: | chr3:15506407-15506220 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 7-196 |
| Cow position: | chr3:21340999-21341197 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 17, 186 |
| Conread position: | 7-197 |
| Cow position: | chr3:55189796-55189985 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 7-197 |
| Cow position: | chr3:55835863-55836063 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-233 |
| Cow position: | chr3:83934471-83934244 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 8-195 |
| Cow position: | chr3:52608139-52607951 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 10-139 |
| Cow position: | chr3:62046620-62046487 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 10-154 |
| Cow position: | chr3:54506663-54506520 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 10-188 |
| Cow position: | chr3:74134657-74134480 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 10-195 |
| Cow position: | chr3:13329817-13330005 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 10-195 |
| Cow position: | chr3:52652125-52652306 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 10-196 |
| Cow position: | chr3:75158318-75158132 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 19, 130 |
| Conread position: | 10-197 |
| Cow position: | chr3:2393006-2393200 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 10-197 |
| Cow position: | chr3:4031930-4031734 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 10-197 |
| Cow position: | chr3:8061085-8060898 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 10-197 |
| Cow position: | chr3:12705587-12705793 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 10-197 |
| Cow position: | chr3:48296668-48296475 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 10-197 |
| Cow position: | chr3:56476638-56476448 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 8, 140 |
| Conread position: | 10-197 |
| Cow position: | chr3:65800548-65800359 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 10-197 |
| Cow position: | chr3:66292220-66292413 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 10-197 |
| Cow position: | chr3:74234150-74233961 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 10-197 |
| Cow position: | chr3:81277742-81277937 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 10-197 |
| Cow position: | chr3:83815831-83816027 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 10-204 |
| Cow position: | chr3:78945875-78946077 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 10-210 |
| Cow position: | chr3:29807422-29807214 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 10-212 |
| Cow position: | chr3:22820528-22820319 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 154 |
| Conread position: | 10-232 |
| Cow position: | chr3:55272089-55272314 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 11-142 |
| Cow position: | chr3:26874547-26874412 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 11-193 |
| Cow position: | chr3:53790581-53790771 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 11-197 |
| Cow position: | chr3:25754979-25754802 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 11-197 |
| Cow position: | chr3:67704500-67704306 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 12-178 |
| Cow position: | chr3:76713369-76713537 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 12-189 |
| Cow position: | chr3:26960634-26960821 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 12-190 |
| Cow position: | chr3:67929306-67929495 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 12-197 |
| Cow position: | chr3:55124326-55124512 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 12-211 |
| Cow position: | chr3:15051995-15052194 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 13-194 |
| Cow position: | chr3:22676148-22676316 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 15-138 |
| Cow position: | chr3:68616375-68616499 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 15-144 |
| Cow position: | chr3:34294332-34294464 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 15-197 |
| Cow position: | chr3:13507418-13507229 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 15-197 |
| Cow position: | chr3:81371597-81371422 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 54, 124 |
| Conread position: | 15-199 |
| Cow position: | chr3:68156687-68156494 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 16-139 |
| Cow position: | chr3:70762171-70762298 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 16-154 |
| Cow position: | chr3:22924461-22924599 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 16-178 |
| Cow position: | chr3:70609574-70609407 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 16-195 |
| Cow position: | chr3:2630746-2630571 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 8, 128 |
| Conread position: | 16-196 |
| Cow position: | chr3:60597493-60597315 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 16-197 |
| Cow position: | chr3:29887473-29887658 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 16-197 |
| Cow position: | chr3:45647628-45647442 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 16-197 |
| Cow position: | chr3:68627735-68627909 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 16-211 |
| Cow position: | chr3:5850980-5851177 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 125, 47 |
| Conread position: | 17-185 |
| Cow position: | chr3:14465764-14465930 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 6 |
| Conread position: | 18-196 |
| Cow position: | chr3:15057660-15057831 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 18-197 |
| Cow position: | chr3:17450993-17451168 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 123, 39 |
| Conread position: | 18-197 |
| Cow position: | chr3:54946078-54945890 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 18-197 |
| Cow position: | chr3:80564911-80564726 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 18-211 |
| Cow position: | chr3:59610771-59610973 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 19-193 |
| Cow position: | chr3:52722064-52722229 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 21-187 |
| Cow position: | chr3:74754269-74754105 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 21-197 |
| Cow position: | chr3:52650585-52650767 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 21-211 |
| Cow position: | chr3:46350616-46350410 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 22-193 |
| Cow position: | chr3:20129890-20129712 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 22-197 |
| Cow position: | chr3:74088224-74088408 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 23-197 |
| Cow position: | chr3:83441938-83442114 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 23-223 |
| Cow position: | chr3:45534353-45534561 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 24-196 |
| Cow position: | chr3:525287-525121 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 24-197 |
| Cow position: | chr3:51255731-51255550 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 113 |
| Conread position: | 28-197 |
| Cow position: | chr3:26894600-26894427 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 41, 136 |
| Conread position: | 31-139 |
| Cow position: | chr3:76922727-76922838 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 31-156 |
| Cow position: | chr3:30940747-30940623 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 31-179 |
| Cow position: | chr3:23105430-23105582 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 31-211 |
| Cow position: | chr3:83921133-83920950 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 31-223 |
| Cow position: | chr3:26681868-26682055 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 175, 37 |
| Conread position: | 32-188 |
| Cow position: | chr3:18558106-18557958 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 32-197 |
| Cow position: | chr3:57764162-57763989 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 32-234 |
| Cow position: | chr3:15661765-15661975 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 37, 101 |
| Conread position: | 33-195 |
| Cow position: | chr3:33632958-33633119 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 33-196 |
| Cow position: | chr3:15158976-15158808 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 33-197 |
| Cow position: | chr3:22171121-22170956 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 103 |
| Conread position: | 33-197 |
| Cow position: | chr3:56059741-56059573 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 36, 128 |
| Conread position: | 34-197 |
| Cow position: | chr3:66885108-66885272 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 107, 23 |
| Conread position: | 42-197 |
| Cow position: | chr3:69961789-69961945 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 43-197 |
| Cow position: | chr3:16004066-16004220 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 44-214 |
| Cow position: | chr3:9116819-9116655 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 49-197 |
| Cow position: | chr3:4861605-4861455 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 132 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 49-197 |
| Cow position: | chr3:61467525-61467371 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 66-193 |
| Cow position: | chr3:19404214-19404093 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 66-197 |
| Cow position: | chr3:22716382-22716514 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 68-202 |
| Cow position: | chr3:12563374-12563239 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 70-196 |
| Cow position: | chr3:79196486-79196611 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 70-197 |
| Cow position: | chr3:61262698-61262569 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 74-184 |
| Cow position: | chr3:45221811-45221921 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 74-197 |
| Cow position: | chr3:22907941-22908068 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 94-223 |
| Cow position: | chr3:78093800-78093926 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 44 |
Show alignments to all cow chromosomes.