Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-125
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 1-128
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 111

Conread position: 1-132
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 1-146
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 1-147
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 1-151
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 17, 8

Conread position: 1-154
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 14

Conread position: 1-157
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 1-169
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 30

Conread position: 1-178
Cow position:
Alignm length: 186
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 58

Conread position: 1-181
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 47

Conread position: 1-189
Cow position:
Alignm length: 198
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 41

Conread position: 1-193
Cow position:
Alignm length: 203
Alignm identity: 164
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 1-194
Cow position:
Alignm length: 202
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-195
Cow position:
Alignm length: 201
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 1-195
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 10

Conread position: 1-196
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 34, 44

Conread position: 1-196
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 20

Conread position: 1-196
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 54

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 67

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 22

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 162
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 66, 20

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 163
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 71

Conread position: 1-197
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 70

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 163
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 161

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 6, 61

Conread position: 1-197
Cow position:
Alignm length: 209
Alignm identity: 170
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 140

Conread position: 1-211
Cow position:
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-211
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 68, 20

Conread position: 1-222
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 68, 22

Conread position: 1-239
Cow position:
Alignm length: 249
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 19

Conread position: 1-245
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 68, 22

Conread position: 2-137
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 2-197
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 2-223
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 3-125
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 20

Conread position: 3-153
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 9

Conread position: 3-162
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 18

Conread position: 3-170
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 138, 20

Conread position: 3-193
Cow position:
Alignm length: 199
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 3-197
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 4-153
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 5-196
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 6-197
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 65

Conread position: 6-197
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 57

Conread position: 7-116
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 7-176
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 7-197
Cow position:
Alignm length: 201
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 7-197
Cow position:
Alignm length: 200
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 26, 0

Conread position: 7-197
Cow position:
Alignm length: 195
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 99

Conread position: 7-234
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 8-196
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 65

Conread position: 8-223
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 198, 24

Conread position: 9-193
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 12

Conread position: 10-125
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 10-157
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 125

Conread position: 10-170
Cow position:
Alignm length: 171
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 10-172
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 38

Conread position: 10-172
Cow position:
Alignm length: 165
Alignm identity: 137
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 9, 60

Conread position: 10-177
Cow position:
Alignm length: 176
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 59

Conread position: 10-195
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 161

Conread position: 10-197
Cow position:
Alignm length: 197
Alignm identity: 159
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 25, 114

Conread position: 10-197
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 11

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 25, 121

Conread position: 10-210
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 133

Conread position: 10-214
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 17

Conread position: 10-223
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 11-123
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 11-184
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 73

Conread position: 11-185
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 121

Conread position: 11-193
Cow position:
Alignm length: 191
Alignm identity: 158
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 58, 10

Conread position: 11-196
Cow position:
Alignm length: 189
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 71

Conread position: 11-197
Cow position:
Alignm length: 197
Alignm identity: 157
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 7, 20

Conread position: 11-197
Cow position:
Alignm length: 193
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 110

Conread position: 11-197
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 123, 17

Conread position: 12-153
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 54

Conread position: 12-196
Cow position:
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 12-197
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 17, 77

Conread position: 12-212
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 35

Conread position: 12-214
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 172, 56

Conread position: 13-193
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 54

Conread position: 13-196
Cow position:
Alignm length: 189
Alignm identity: 153
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 128, 18

Conread position: 15-190
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 126, 51

Conread position: 15-197
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 10, 124

Conread position: 15-197
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 23, 123

Conread position: 15-197
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 89, 53

Conread position: 15-197
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 16-148
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 16-192
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 18

Conread position: 16-196
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 53, 34

Conread position: 16-197
Cow position:
Alignm length: 190
Alignm identity: 154
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 16-197
Cow position:
Alignm length: 191
Alignm identity: 157
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 17-152
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 52, 13

Conread position: 18-154
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 88

Conread position: 20-179
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 36

Conread position: 20-197
Cow position:
Alignm length: 181
Alignm identity: 148
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 116, 48

Conread position: 21-168
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 53

Conread position: 21-197
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 47

Conread position: 21-234
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 10

Conread position: 22-195
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 47, 39

Conread position: 22-197
Cow position:
Alignm length: 181
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 112

Conread position: 22-197
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 46

Conread position: 23-157
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 23-181
Cow position:
Alignm length: 165
Alignm identity: 139
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 49

Conread position: 23-197
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 14

Conread position: 23-197
Cow position:
Alignm length: 182
Alignm identity: 145
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 92

Conread position: 24-148
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 24-192
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 44

Conread position: 25-194
Cow position:
Alignm length: 178
Alignm identity: 146
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 0

Conread position: 25-197
Cow position:
Alignm length: 184
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 26-194
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 43

Conread position: 29-197
Cow position:
Alignm length: 174
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 37

Conread position: 31-197
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 123

Conread position: 31-197
Cow position:
Alignm length: 170
Alignm identity: 141
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 40, 57

Conread position: 31-197
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 32-197
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 107

Conread position: 32-197
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 109, 35

Conread position: 32-197
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 37, 123

Conread position: 32-210
Cow position:
Alignm length: 188
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 53

Conread position: 33-169
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 33-197
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 38-204
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 99

Conread position: 41-197
Cow position:
Alignm length: 162
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 5

Conread position: 41-197
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 94

Conread position: 42-187
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 42-197
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 43-192
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 24

Conread position: 43-197
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 92

Conread position: 44-195
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 98, 25

Conread position: 44-197
Cow position:
Alignm length: 162
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 45-168
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 90

Conread position: 45-197
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 46-193
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 6, 0

Conread position: 51-213
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 45

Conread position: 59-172
Cow position:
Alignm length: 118
Alignm identity: 102
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 60-172
Cow position:
Alignm length: 116
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 24

Conread position: 68-197
Cow position:
Alignm length: 135
Alignm identity: 111
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 68-197
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 76-193
Cow position:
Alignm length: 126
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 96-197
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.