Cow genome map
| Conread name: | rret16_g12.y1 |
| Conread position: | 1-125 |
| Cow position: | chr5:42670850-42670968 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-128 |
| Cow position: | chr5:27171965-27172095 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 1-132 |
| Cow position: | chr5:49440852-49440991 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-146 |
| Cow position: | chr5:991483-991332 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-147 |
| Cow position: | chr5:38647374-38647224 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-151 |
| Cow position: | chr5:35763290-35763139 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 1-154 |
| Cow position: | chr5:7921385-7921542 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 1-157 |
| Cow position: | chr5:70951861-70952021 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-169 |
| Cow position: | chr5:3582579-3582415 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 140, 30 |
| Conread position: | 1-178 |
| Cow position: | chr5:30629140-30629324 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 1-181 |
| Cow position: | chr5:27015699-27015511 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 1-189 |
| Cow position: | chr5:6286414-6286604 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 1-193 |
| Cow position: | chr5:62826733-62826935 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-194 |
| Cow position: | chr5:30253760-30253559 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-195 |
| Cow position: | chr5:43474864-43474664 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-195 |
| Cow position: | chr5:62172431-62172235 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 21, 10 |
| Conread position: | 1-196 |
| Cow position: | chr5:4218886-4218693 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 1-196 |
| Cow position: | chr5:34916150-34915957 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 68, 20 |
| Conread position: | 1-196 |
| Cow position: | chr5:67243940-67243741 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 1-197 |
| Cow position: | chr5:1779265-1779447 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 1-197 |
| Cow position: | chr5:4797304-4797496 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 1-197 |
| Cow position: | chr5:6086541-6086747 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-197 |
| Cow position: | chr5:15722055-15722240 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 1-197 |
| Cow position: | chr5:19470171-19470372 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 1-197 |
| Cow position: | chr5:38833142-38832934 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-197 |
| Cow position: | chr5:41545874-41546079 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 1-197 |
| Cow position: | chr5:50533365-50533568 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 25, 161 |
| Conread position: | 1-197 |
| Cow position: | chr5:57626816-57626621 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 6, 61 |
| Conread position: | 1-197 |
| Cow position: | chr5:65752879-65752671 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-197 |
| Cow position: | chr5:74643656-74643847 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 140 |
| Conread position: | 1-211 |
| Cow position: | chr5:34638903-34638686 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-211 |
| Cow position: | chr5:35826621-35826390 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-214 |
| Cow position: | chr5:19278687-19278894 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 68, 20 |
| Conread position: | 1-222 |
| Cow position: | chr5:47601831-47601605 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 1-239 |
| Cow position: | chr5:30276709-30276465 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 1-245 |
| Cow position: | chr5:29903504-29903754 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 2-137 |
| Cow position: | chr5:44726309-44726450 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 2-197 |
| Cow position: | chr5:55966862-55967068 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-223 |
| Cow position: | chr5:32338947-32339188 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-125 |
| Cow position: | chr5:7698017-7697893 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 3-153 |
| Cow position: | chr5:44446855-44447008 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 3-162 |
| Cow position: | chr5:56877498-56877338 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 3-170 |
| Cow position: | chr5:55232794-55232951 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 138, 20 |
| Conread position: | 3-193 |
| Cow position: | chr5:21828879-21828683 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 3-197 |
| Cow position: | chr5:11229655-11229859 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 4-153 |
| Cow position: | chr5:29097380-29097218 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-196 |
| Cow position: | chr5:56518199-56518394 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 6-197 |
| Cow position: | chr5:25230998-25231198 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 6-197 |
| Cow position: | chr5:63992162-63992348 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 57 |
| Conread position: | 7-116 |
| Cow position: | chr5:36038994-36039107 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-176 |
| Cow position: | chr5:14629802-14629980 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-197 |
| Cow position: | chr5:6045302-6045102 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-197 |
| Cow position: | chr5:7044697-7044896 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 7-197 |
| Cow position: | chr5:53835722-53835529 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 99 |
| Conread position: | 7-234 |
| Cow position: | chr5:45845683-45845920 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 8-196 |
| Cow position: | chr5:69731513-69731333 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 8-223 |
| Cow position: | chr5:66366514-66366318 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 198, 24 |
| Conread position: | 9-193 |
| Cow position: | chr5:29505111-29504928 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 10-125 |
| Cow position: | chr5:60016174-60016055 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 10-157 |
| Cow position: | chr5:45574624-45574475 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 125 |
| Conread position: | 10-170 |
| Cow position: | chr5:50821790-50821620 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 10-172 |
| Cow position: | chr5:35247104-35247271 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 10-172 |
| Cow position: | chr5:45397579-45397418 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 10-177 |
| Cow position: | chr5:65967725-65967897 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 10-195 |
| Cow position: | chr5:24996216-24996409 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 161 |
| Conread position: | 10-197 |
| Cow position: | chr5:5111068-5111262 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 10-197 |
| Cow position: | chr5:51053646-51053833 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 10-197 |
| Cow position: | chr5:60520169-60519981 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 25, 121 |
| Conread position: | 10-210 |
| Cow position: | chr5:8024187-8024391 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 10-214 |
| Cow position: | chr5:64321760-64321545 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 10-223 |
| Cow position: | chr5:30845119-30844898 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 11-123 |
| Cow position: | chr5:60183808-60183691 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 11-184 |
| Cow position: | chr5:41452661-41452839 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 11-185 |
| Cow position: | chr5:3549782-3549951 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 11-193 |
| Cow position: | chr5:14314529-14314340 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 58, 10 |
| Conread position: | 11-196 |
| Cow position: | chr5:23168822-23169003 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 11-197 |
| Cow position: | chr5:9859710-9859904 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 11-197 |
| Cow position: | chr5:60126378-60126188 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 110 |
| Conread position: | 11-197 |
| Cow position: | chr5:66404139-66403958 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 12-153 |
| Cow position: | chr5:57101776-57101917 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 12-196 |
| Cow position: | chr5:6670190-6670382 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 12-197 |
| Cow position: | chr5:46509862-46510052 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 12-212 |
| Cow position: | chr5:19813218-19813412 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 12-214 |
| Cow position: | chr5:68718873-68718680 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 172, 56 |
| Conread position: | 13-193 |
| Cow position: | chr5:66281410-66281230 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 13-196 |
| Cow position: | chr5:56524171-56523989 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 128, 18 |
| Conread position: | 15-190 |
| Cow position: | chr5:44028304-44028480 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 126, 51 |
| Conread position: | 15-197 |
| Cow position: | chr5:30302895-30302710 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 10, 124 |
| Conread position: | 15-197 |
| Cow position: | chr5:35145351-35145167 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 15-197 |
| Cow position: | chr5:45409323-45409140 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 89, 53 |
| Conread position: | 15-197 |
| Cow position: | chr5:56070858-56070667 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 16-148 |
| Cow position: | chr5:72951843-72951703 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 16-192 |
| Cow position: | chr5:10261239-10261419 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 16-196 |
| Cow position: | chr5:15598238-15598418 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 16-197 |
| Cow position: | chr5:15426529-15426340 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 16-197 |
| Cow position: | chr5:57935109-57935299 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 17-152 |
| Cow position: | chr5:25035246-25035382 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 18-154 |
| Cow position: | chr5:19294491-19294628 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 88 |
| Conread position: | 20-179 |
| Cow position: | chr5:30949920-30950087 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 20-197 |
| Cow position: | chr5:64823319-64823498 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 148 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 116, 48 |
| Conread position: | 21-168 |
| Cow position: | chr5:42050545-42050391 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 21-197 |
| Cow position: | chr5:40109486-40109316 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 47 |
| Conread position: | 21-234 |
| Cow position: | chr5:43737959-43738173 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 22-195 |
| Cow position: | chr5:56028534-56028714 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 22-197 |
| Cow position: | chr5:3492189-3492016 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 22-197 |
| Cow position: | chr5:45706040-45705862 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 80, 46 |
| Conread position: | 23-157 |
| Cow position: | chr5:63865788-63865650 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 23-181 |
| Cow position: | chr5:41010003-41010166 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 23-197 |
| Cow position: | chr5:21617449-21617270 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 23-197 |
| Cow position: | chr5:34288478-34288655 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 24-148 |
| Cow position: | chr5:64027016-64027144 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 24-192 |
| Cow position: | chr5:63185264-63185434 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 25-194 |
| Cow position: | chr5:57575760-57575583 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 25-197 |
| Cow position: | chr5:50943156-50943339 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 26-194 |
| Cow position: | chr5:20783608-20783442 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 115, 43 |
| Conread position: | 29-197 |
| Cow position: | chr5:54530964-54530797 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 31-197 |
| Cow position: | chr5:7755577-7755738 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 31-197 |
| Cow position: | chr5:66257623-66257457 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 40, 57 |
| Conread position: | 31-197 |
| Cow position: | chr5:72564747-72564576 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 32-197 |
| Cow position: | chr5:5848205-5848372 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 107 |
| Conread position: | 32-197 |
| Cow position: | chr5:40927997-40928159 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 32-197 |
| Cow position: | chr5:55176874-55176701 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 32-197 |
| Cow position: | chr5:72150231-72150066 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 32-210 |
| Cow position: | chr5:16893789-16893975 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 33-169 |
| Cow position: | chr5:12351807-12351947 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 33-197 |
| Cow position: | chr5:37713914-37714090 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 38-204 |
| Cow position: | chr5:33467064-33467233 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 41-197 |
| Cow position: | chr5:37814596-37814438 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 28, 5 |
| Conread position: | 41-197 |
| Cow position: | chr5:66339054-66338898 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 42-187 |
| Cow position: | chr5:69520865-69520715 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 42-197 |
| Cow position: | chr5:37646048-37645888 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 43-192 |
| Cow position: | chr5:6033207-6033058 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 43-197 |
| Cow position: | chr5:12672057-12672212 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 44-195 |
| Cow position: | chr5:43457550-43457702 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 44-197 |
| Cow position: | chr5:64139538-64139377 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 45-168 |
| Cow position: | chr5:23866192-23866317 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 45-197 |
| Cow position: | chr5:37366872-37366712 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 46-193 |
| Cow position: | chr5:58793646-58793796 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 51-213 |
| Cow position: | chr5:9390502-9390333 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 59-172 |
| Cow position: | chr5:46425894-46426011 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 60-172 |
| Cow position: | chr5:39872801-39872688 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 68-197 |
| Cow position: | chr5:15363839-15363705 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 68-197 |
| Cow position: | chr5:66297183-66297053 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 76-193 |
| Cow position: | chr5:50975829-50975704 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 96-197 |
| Cow position: | chr5:19969111-19969217 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.