Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-123
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 32

Conread position: 1-173
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 1-179
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 1-186
Cow position:
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 113

Conread position: 1-190
Cow position:
Alignm length: 197
Alignm identity: 159
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 32

Conread position: 1-192
Cow position:
Alignm length: 199
Alignm identity: 155
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 157

Conread position: 1-193
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 62

Conread position: 1-193
Cow position:
Alignm length: 204
Alignm identity: 164
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 1-193
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 1-194
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 135

Conread position: 1-194
Cow position:
Alignm length: 197
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 30

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 154
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 139, 65

Conread position: 1-196
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 31

Conread position: 1-196
Cow position:
Alignm length: 204
Alignm identity: 163
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 68, 29

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 162
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 17, 73

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 20

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 20

Conread position: 1-197
Cow position:
Alignm length: 200
Alignm identity: 164
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 19, 71

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 140

Conread position: 1-197
Cow position:
Alignm length: 209
Alignm identity: 168
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 19, 75

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 20

Conread position: 1-197
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 70

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 74

Conread position: 1-197
Cow position:
Alignm length: 209
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 36

Conread position: 1-197
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 94

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 167
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 20

Conread position: 1-210
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 1-211
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 142

Conread position: 1-211
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 11, 125

Conread position: 1-243
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 1-258
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 69, 19

Conread position: 2-163
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 2-184
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 2-195
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 2-195
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 138

Conread position: 2-197
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 18, 36

Conread position: 2-197
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 139, 66

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 149
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 3-196
Cow position:
Alignm length: 199
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 134

Conread position: 4-197
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 65

Conread position: 4-197
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 11

Conread position: 4-197
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 65, 19

Conread position: 5-153
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 24, 122

Conread position: 5-197
Cow position:
Alignm length: 194
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 136, 23

Conread position: 5-234
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 157

Conread position: 7-178
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 19, 10

Conread position: 7-197
Cow position:
Alignm length: 198
Alignm identity: 161
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 9-141
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 85

Conread position: 10-155
Cow position:
Alignm length: 149
Alignm identity: 124
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 131

Conread position: 10-185
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 86

Conread position: 10-193
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 59

Conread position: 10-195
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 7, 154

Conread position: 10-196
Cow position:
Alignm length: 197
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 14

Conread position: 10-197
Cow position:
Alignm length: 198
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 80

Conread position: 10-197
Cow position:
Alignm length: 190
Alignm identity: 156
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 59, 11

Conread position: 10-201
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 49

Conread position: 11-197
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 20

Conread position: 11-197
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 11-212
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 16, 86

Conread position: 12-190
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 56

Conread position: 12-193
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 12-197
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 94

Conread position: 12-214
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 57, 16

Conread position: 13-196
Cow position:
Alignm length: 195
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 8

Conread position: 13-197
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 56, 48

Conread position: 14-197
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 55, 158

Conread position: 16-192
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 16-195
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 37

Conread position: 16-195
Cow position:
Alignm length: 183
Alignm identity: 150
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 130

Conread position: 16-197
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 167

Conread position: 16-197
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 14

Conread position: 16-197
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 16-211
Cow position:
Alignm length: 199
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 16-211
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 15

Conread position: 16-223
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 132

Conread position: 17-188
Cow position:
Alignm length: 178
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 17-196
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 17-197
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 79

Conread position: 19-198
Cow position:
Alignm length: 184
Alignm identity: 151
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 50, 0

Conread position: 21-143
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 80

Conread position: 21-197
Cow position:
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 112

Conread position: 22-195
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 103

Conread position: 22-196
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 112

Conread position: 22-197
Cow position:
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 22-197
Cow position:
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 22-197
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 23-181
Cow position:
Alignm length: 164
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 66

Conread position: 23-197
Cow position:
Alignm length: 179
Alignm identity: 142
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 24-195
Cow position:
Alignm length: 173
Alignm identity: 139
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 117, 43

Conread position: 25-174
Cow position:
Alignm length: 150
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 26-244
Cow position:
Alignm length: 226
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 31

Conread position: 31-196
Cow position:
Alignm length: 170
Alignm identity: 145
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 31-196
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 26

Conread position: 31-197
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 31-197
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 37

Conread position: 31-211
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 33

Conread position: 31-234
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 132

Conread position: 32-197
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 140

Conread position: 32-224
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 33-170
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 34-212
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 179

Conread position: 37-197
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 46

Conread position: 37-197
Cow position:
Alignm length: 164
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 31, 88

Conread position: 37-197
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 122

Conread position: 38-212
Cow position:
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 103, 14

Conread position: 39-197
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 45-197
Cow position:
Alignm length: 158
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 88

Conread position: 45-214
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 148

Conread position: 70-197
Cow position:
Alignm length: 133
Alignm identity: 112
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 71, 15

Conread position: 71-196
Cow position:
Alignm length: 127
Alignm identity: 106
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.