Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-119
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 15, 89

Conread position: 1-123
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 1-140
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 1-148
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 1-177
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 1-184
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 74

Conread position: 1-194
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 140

Conread position: 1-194
Cow position:
Alignm length: 200
Alignm identity: 163
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 19, 107

Conread position: 1-195
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 35, 19

Conread position: 1-196
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 117

Conread position: 1-196
Cow position:
Alignm length: 203
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 156

Conread position: 1-196
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 20

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 165
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 140, 20

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 88

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 163
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 15, 151

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 142

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 125

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 133

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 99

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 86

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 125

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 20

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 146

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 20

Conread position: 1-197
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 165

Conread position: 1-210
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 155

Conread position: 1-210
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 1-211
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 68, 19

Conread position: 1-212
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 199

Conread position: 1-234
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 69

Conread position: 1-234
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 71

Conread position: 2-168
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 13

Conread position: 2-197
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 71

Conread position: 2-197
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 138

Conread position: 2-197
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 71

Conread position: 2-197
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 45

Conread position: 3-148
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 143

Conread position: 3-173
Cow position:
Alignm length: 181
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 76

Conread position: 3-185
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 74

Conread position: 3-211
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 30, 18

Conread position: 3-241
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 219

Conread position: 4-178
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 63

Conread position: 4-192
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 17

Conread position: 4-197
Cow position:
Alignm length: 205
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 4-221
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 5-196
Cow position:
Alignm length: 201
Alignm identity: 160
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 17, 85

Conread position: 5-197
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 109

Conread position: 7-195
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 0

Conread position: 7-197
Cow position:
Alignm length: 196
Alignm identity: 158
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 15, 42

Conread position: 10-127
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 63

Conread position: 10-143
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 10-163
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 10-178
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 10-188
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 10-189
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 21

Conread position: 10-195
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 33

Conread position: 10-195
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 10-196
Cow position:
Alignm length: 195
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 10-196
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 62

Conread position: 10-197
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 63

Conread position: 10-197
Cow position:
Alignm length: 190
Alignm identity: 155
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 11, 23

Conread position: 10-197
Cow position:
Alignm length: 199
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 10-197
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 25, 5

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 153
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 25, 113

Conread position: 10-197
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 178

Conread position: 11-139
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 11-154
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 76

Conread position: 11-184
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 0

Conread position: 11-193
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 59

Conread position: 11-195
Cow position:
Alignm length: 195
Alignm identity: 160
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 8, 125

Conread position: 11-197
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 132

Conread position: 11-197
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 60

Conread position: 11-197
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 143

Conread position: 11-198
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 21

Conread position: 12-196
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 10, 46

Conread position: 12-197
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 61

Conread position: 12-197
Cow position:
Alignm length: 197
Alignm identity: 161
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 12-197
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 12-197
Cow position:
Alignm length: 194
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 79

Conread position: 12-197
Cow position:
Alignm length: 190
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 15

Conread position: 12-211
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 12-234
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 158

Conread position: 15-197
Cow position:
Alignm length: 188
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 126

Conread position: 15-197
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 54, 121

Conread position: 16-196
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 16-197
Cow position:
Alignm length: 183
Alignm identity: 147
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 14

Conread position: 16-197
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 17-197
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 124, 64

Conread position: 17-234
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 71

Conread position: 17-238
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 219

Conread position: 18-197
Cow position:
Alignm length: 185
Alignm identity: 152
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 7, 106

Conread position: 18-197
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 13

Conread position: 19-195
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 16, 135

Conread position: 19-234
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 141

Conread position: 20-234
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 21-197
Cow position:
Alignm length: 185
Alignm identity: 154
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 22-158
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 22-197
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 46

Conread position: 22-197
Cow position:
Alignm length: 182
Alignm identity: 151
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 23-194
Cow position:
Alignm length: 180
Alignm identity: 144
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 23-234
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 189

Conread position: 24-157
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 24-179
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 97

Conread position: 31-157
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 8

Conread position: 31-176
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 125

Conread position: 31-180
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 133

Conread position: 31-197
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 31-197
Cow position:
Alignm length: 173
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 31-197
Cow position:
Alignm length: 174
Alignm identity: 142
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 32-195
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 37, 91

Conread position: 32-197
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 109, 0

Conread position: 32-197
Cow position:
Alignm length: 173
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 138

Conread position: 32-197
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 93

Conread position: 32-197
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 153

Conread position: 32-232
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 174, 106

Conread position: 33-196
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 96

Conread position: 33-197
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 43-192
Cow position:
Alignm length: 153
Alignm identity: 129
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 26, 98

Conread position: 48-197
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 65-197
Cow position:
Alignm length: 137
Alignm identity: 115
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 36, 126

Conread position: 67-167
Cow position:
Alignm length: 101
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 68-196
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 94

Conread position: 68-231
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 107

Conread position: 77-190
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 103

Conread position: 78-197
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 78-197
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 87-197
Cow position:
Alignm length: 117
Alignm identity: 99
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 93-192
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.