Cow genome map

Conread name: rret16_g12.y1

Conread position: 1-128
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 27

Conread position: 1-131
Cow position:
Alignm length: 141
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 1-148
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 72

Conread position: 1-150
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 74

Conread position: 1-153
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 73

Conread position: 1-157
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 126

Conread position: 1-161
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 57

Conread position: 1-165
Cow position:
Alignm length: 183
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 1-186
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 25

Conread position: 1-191
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 1-191
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 180

Conread position: 1-192
Cow position:
Alignm length: 203
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 160

Conread position: 1-193
Cow position:
Alignm length: 202
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 71

Conread position: 1-195
Cow position:
Alignm length: 201
Alignm identity: 163
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 71

Conread position: 1-195
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 8

Conread position: 1-195
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 32, 20

Conread position: 1-197
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 188

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 22

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 68, 20

Conread position: 1-197
Cow position:
Alignm length: 204
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 66

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 74

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 11

Conread position: 1-197
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 1-197
Cow position:
Alignm length: 205
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 123

Conread position: 1-197
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 51

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 32, 13

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 163
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 22

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 167
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 140, 19

Conread position: 1-197
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 118

Conread position: 1-202
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 44

Conread position: 2-197
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 2-239
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 7

Conread position: 3-167
Cow position:
Alignm length: 176
Alignm identity: 141
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 3-197
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 187

Conread position: 3-221
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 131

Conread position: 6-195
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 7-197
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 15, 133

Conread position: 7-199
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 88

Conread position: 7-201
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 8-197
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 40

Conread position: 8-197
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 45

Conread position: 9-197
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 10-157
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 37

Conread position: 10-176
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 164

Conread position: 10-182
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 10-184
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 62

Conread position: 10-195
Cow position:
Alignm length: 194
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 10-196
Cow position:
Alignm length: 195
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 0

Conread position: 10-196
Cow position:
Alignm length: 194
Alignm identity: 156
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 11

Conread position: 10-197
Cow position:
Alignm length: 192
Alignm identity: 154
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 23, 11

Conread position: 10-197
Cow position:
Alignm length: 195
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 12

Conread position: 10-197
Cow position:
Alignm length: 200
Alignm identity: 159
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 156
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 10-197
Cow position:
Alignm length: 190
Alignm identity: 154
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 9, 49

Conread position: 10-197
Cow position:
Alignm length: 192
Alignm identity: 155
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 36

Conread position: 10-197
Cow position:
Alignm length: 197
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 10-197
Cow position:
Alignm length: 192
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 10-197
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 59, 11

Conread position: 10-197
Cow position:
Alignm length: 201
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 0

Conread position: 10-197
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 10-197
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 107

Conread position: 10-197
Cow position:
Alignm length: 193
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 135

Conread position: 10-197
Cow position:
Alignm length: 198
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 10-197
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 10-198
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 11

Conread position: 10-212
Cow position:
Alignm length: 210
Alignm identity: 171
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 130

Conread position: 10-249
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 33

Conread position: 11-148
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 94

Conread position: 11-192
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 10

Conread position: 11-197
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 12

Conread position: 11-197
Cow position:
Alignm length: 194
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 85

Conread position: 11-201
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 165

Conread position: 12-195
Cow position:
Alignm length: 192
Alignm identity: 151
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 12-196
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 45

Conread position: 12-197
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 117

Conread position: 12-197
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 128

Conread position: 12-197
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 14-178
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 7

Conread position: 15-145
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 15-148
Cow position:
Alignm length: 140
Alignm identity: 120
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 15-195
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 174

Conread position: 15-195
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 91

Conread position: 15-196
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 36, 60

Conread position: 15-197
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 54

Conread position: 15-197
Cow position:
Alignm length: 191
Alignm identity: 153
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 11, 0

Conread position: 16-188
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 16-196
Cow position:
Alignm length: 186
Alignm identity: 152
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 16-197
Cow position:
Alignm length: 193
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 87

Conread position: 16-197
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 80

Conread position: 16-234
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 55

Conread position: 17-188
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 17-196
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 117

Conread position: 17-197
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 52

Conread position: 18-197
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 55

Conread position: 18-233
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 13

Conread position: 23-197
Cow position:
Alignm length: 183
Alignm identity: 151
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 46, 93

Conread position: 31-139
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 31-195
Cow position:
Alignm length: 166
Alignm identity: 138
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 110, 0

Conread position: 31-197
Cow position:
Alignm length: 170
Alignm identity: 138
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 38, 102

Conread position: 31-211
Cow position:
Alignm length: 186
Alignm identity: 149
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 31-211
Cow position:
Alignm length: 190
Alignm identity: 153
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 32-157
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 32-181
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 32-197
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 107, 120

Conread position: 32-197
Cow position:
Alignm length: 174
Alignm identity: 141
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 37, 63

Conread position: 33-197
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 33-197
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 34-197
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 144

Conread position: 35-197
Cow position:
Alignm length: 170
Alignm identity: 142
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 60

Conread position: 41-197
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 97, 30

Conread position: 41-203
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 43

Conread position: 43-144
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 43-197
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 50

Conread position: 44-197
Cow position:
Alignm length: 162
Alignm identity: 130
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 47-188
Cow position:
Alignm length: 147
Alignm identity: 127
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 53-197
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 97

Conread position: 56-197
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 85

Conread position: 58-195
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 59-197
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 138

Conread position: 59-211
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 66-195
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 91-197
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 61

Conread position: 94-195
Cow position:
Alignm length: 103
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 58

Show alignments to all cow chromosomes.