Cow genome map
| Conread name: | rret20_p24.y1 |
| Conread position: | 278-398 |
| Cow position: | chr5:24934106-24933980 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 278-400 |
| Cow position: | chr5:67212277-67212151 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 279-402 |
| Cow position: | chr5:5938218-5938095 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 283-400 |
| Cow position: | chr5:64139456-64139336 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 288-399 |
| Cow position: | chr5:6045176-6045060 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 291-400 |
| Cow position: | chr5:55942514-55942625 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 293-402 |
| Cow position: | chr5:35683955-35683842 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 293-402 |
| Cow position: | chr5:35684818-35684705 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 293-422 |
| Cow position: | chr5:64823429-64823562 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 294-400 |
| Cow position: | chr5:34288589-34288697 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 87 |
| Conread position: | 294-400 |
| Cow position: | chr5:46509986-46510095 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 296-400 |
| Cow position: | chr5:21828743-21828637 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 299-398 |
| Cow position: | chr5:46322936-46323037 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 299-400 |
| Cow position: | chr5:6086686-6086789 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 299-400 |
| Cow position: | chr5:15598358-15598461 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 299-400 |
| Cow position: | chr5:27154895-27154795 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 299-400 |
| Cow position: | chr5:37646674-37646779 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 299-400 |
| Cow position: | chr5:56524047-56523947 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 299-400 |
| Cow position: | chr5:58005119-58005017 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 299-400 |
| Cow position: | chr5:58793739-58793842 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 299-400 |
| Cow position: | chr5:66297114-66297011 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 299-401 |
| Cow position: | chr5:31640303-31640199 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 299-401 |
| Cow position: | chr5:45845820-45845923 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 300-400 |
| Cow position: | chr5:17087154-17087257 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 301-400 |
| Cow position: | chr5:34916015-34915915 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 301-407 |
| Cow position: | chr5:39447655-39447766 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 302-400 |
| Cow position: | chr5:27403370-27403471 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 303-399 |
| Cow position: | chr5:35826462-35826364 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 78 |
| Conread position: | 303-400 |
| Cow position: | chr5:63992291-63992391 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.