Cow genome map
| Conread name: | rret20_p24.y1 |
| Conread position: | 279-400 |
| Cow position: | chrX:619109-619234 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 279-400 |
| Cow position: | chrX:33205100-33205218 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 279-400 |
| Cow position: | chrX:35609883-35609760 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 285-399 |
| Cow position: | chrX:42499138-42499254 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 288-399 |
| Cow position: | chrX:14884072-14884187 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 288-400 |
| Cow position: | chrX:11655978-11655860 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 288-400 |
| Cow position: | chrX:17794871-17794759 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 288-402 |
| Cow position: | chrX:32623472-32623355 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 293-400 |
| Cow position: | chrX:7509023-7508913 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 56 |
| Conread position: | 294-396 |
| Cow position: | chrX:29193887-29193786 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 297-400 |
| Cow position: | chrX:38549327-38549222 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 298-400 |
| Cow position: | chrX:20582908-20582804 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 299-394 |
| Cow position: | chrX:19019234-19019332 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 299-399 |
| Cow position: | chrX:37836464-37836361 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 299-399 |
| Cow position: | chrX:42247307-42247409 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:8797124-8797022 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:8899901-8899798 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:33493651-33493549 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:33519494-33519391 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:35542768-35542665 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:38006891-38006994 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 299-400 |
| Cow position: | chrX:42086738-42086636 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:42381223-42381326 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:42874854-42874752 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 299-400 |
| Cow position: | chrX:42994489-42994388 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 299-403 |
| Cow position: | chrX:35388029-35388136 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 299-407 |
| Cow position: | chrX:11589715-11589824 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 105 |
| Conread position: | 300-401 |
| Cow position: | chrX:15007278-15007378 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 301-400 |
| Cow position: | chrX:2523855-2523956 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 301-400 |
| Cow position: | chrX:27432043-27432145 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 81 |
Show alignments to all cow chromosomes.